RNA–Protein interactions for RNA: ENSMUST00000061279.9

Pcdhga11-201, Transcript of Protocadherin gamma A11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhga11, Length 4,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11-201ENSMUST00000061279 Prrg3Q6PAQ9 231 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ddx55Q6ZPL9 600 aaKnown RBP12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gpr141Q7TQP0 305 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Krr1Q8BGA5 380 aaKnown RBP12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 EtnpplQ8BWU8 499 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Lacc1Q8BZT9 430 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Chchd6Q91VN4 273 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Snrpb2Q9CQI7 225 aaKnown RBP12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Atp5dQ9D3D9 168 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Rmdn1Q9DCV4 305 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Cdh13Q9WTR5 714 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ap1m2Q9WVP1 423 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gm4841E9QAA8 417 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Vmn1r39G3UWE6 305 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Smu1Q3UKJ7 513 aaKnown RBP12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Sgo2Q7TSY8 1164 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Samd4bQ80XS6 687 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Il17reQ8BH06 637 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Znf467Q8JZL0 594 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Defb15Q8R2I5 79 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 FdpsQ920E5 353 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Wdr45bQ9CR39 344 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gadd45gip1Q9CR59 222 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Rpl3lE9PWZ3 407 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 TazI7HJS2 263 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Olfr237-ps1K9J725 310 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 SpnP15702 395 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 PrkceP16054 737 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ndufs6P52503 116 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 PighQ5M9N4 188 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Sept11Q8C1B7 431 aaKnown RBP12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Zfp566Q8VCI1 386 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ddx39aQ8VDW0 427 aaKnown RBP12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Lrrc49Q91YK0 686 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Chid1Q922Q9 393 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ifitm3Q9CQW9 137 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Pgam1Q9DBJ1 254 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Rad9aQ9Z0F6 389 aa12.14□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Adamtsl3G3UXC7 1706 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 CN725425A0A087WRU1 652 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Prrt4B2RU40 902 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 F6Y6L6 278 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Acvr2bP27040 536 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Shmt1P50431 478 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Sult2a1P52843 285 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Kcnj13P86046 360 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gm5414Q6IFZ8 552 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Arhgef38Q80VK6 770 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Q80Y39 304 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Pgs1Q8BHF7 553 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Tbc1d10bQ8BHL3 798 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 BicralQ8CHH5 1074 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ace2Q8R0I0 805 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Olfr390Q8VEZ7 311 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Q99LU8 229 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Abcg3Q99P81 650 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 NkapQ9D0F4 415 aaKnown RBP12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Tnfaip8l2Q9D8Y7 184 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Col5a2Q3U962 1497 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gm21149A0A0G2JFY7 255 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Akap5D3YVF0 745 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Speer4eK7N6S8 255 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gm17019K7N6W5 255 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 MaptP10637 733 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 AxlQ00993 888 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Pgrmc2Q80UU9 217 aaKnown RBP12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Znf579Q80VM4 562 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Noc4lQ8BHY2 516 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 UnkQ8BL48 810 aaKnown RBP12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Slco6c1Q8C0X7 706 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Dppa3Q8QZY3 150 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Sapcd2Q9D818 391 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Rnft1Q9DCN7 395 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Cdkl2Q9QUK0 568 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ltn1Q6A009 1767 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 1700031M16RikA0A087WSH0 82 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Mkrn2osD3Z393 217 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gm10354K7N6A0 256 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Rhox2gL7MUB9 191 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Gjb3P28231 270 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Sema5bQ60519 1093 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 IqceQ6PCQ0 778 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 KyQ8C8H8 661 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Agr3Q8R3W7 165 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Mcrs1Q99L90 462 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Fam212aQ9CX62 282 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Vps28Q9D1C8 221 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Tmem8aQ9ESN3 769 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Arih1Q9Z1K5 555 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Prdm11A2AGX3 565 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 BgnP28653 369 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Nr2c2P49117 596 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ccr1P51675 355 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Ccdc106Q3ULM0 279 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 McuQ3UMR5 350 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 IspdQ5RJG7 447 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Flot2Q60634 428 aaKnown RBP12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Tll1Q62381 1013 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Pak5Q8C015 719 aa12.13□□□□□ -0.47
Pcdhga11-201ENSMUST00000061279 Batf2Q8R1H8 277 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms