RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ddx50Q99MJ9 734 aaKnown RBP16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Trmt11Q9CWH5 460 aa16.32■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rhbdl2A2AGA4 302 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 DdcO88533 480 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 P01641 117 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Vps4bP46467 444 aaKnown RBP16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Arhgap30Q640N3 1101 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ssx9Q6XAS3 170 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Deup1Q7M6Y5 601 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Olfr301Q7TS04 311 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Olfr293Q7TS10 336 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Disc1Q811T9 852 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pcdh20Q8BIZ0 952 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 TiparpQ8C1B2 657 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ano4Q8C5H1 955 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pabpc5Q8C7D3 381 aaKnown RBP16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Zmiz2Q8CIE2 920 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Prrg2Q8R182 198 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pip4k2cQ91XU3 421 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Trem2Q99NH8 227 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ddit4Q9D3F7 229 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rhox9Q9EQM5 227 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Nup210lQ9D2F7 1881 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Btbd35f16A0A087WSN2 498 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ighg3A0A1Y7VJN6 399 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 SmoktcrA2KF29 484 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cyp2w1E9Q816 493 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ap3d1O54774 1199 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 InvsO89019 1062 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 PtprcP06800 1291 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 SelpQ01102 768 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Nek10Q3UGM2 1111 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 CybbQ61093 570 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Dnajc1Q61712 552 aaKnown RBP16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Sema4aQ62178 760 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Cyp2r1Q6VVW9 501 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ssxb3Q6XAS4 170 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tmem62Q8BXJ9 643 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rmnd5bQ91YQ7 393 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 Morf4l2Q9R0Q4 288 aa16.31■□□□□ 0.2
Trim28-201ENSMUST00000005705 IsxA1A546 240 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mroh7A2AVR2 1279 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Daw1D3Z7A5 415 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 KlO35082 1014 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tgm2P21981 686 aaKnown RBP16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gdf6P43028 454 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 NadkP58058 439 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Asprv1Q09PK2 339 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 MlipQ5FW52 269 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 GpamQ61586 827 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Lrfn2Q80TG9 788 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Mppe1Q80XL7 396 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hspbap1Q8BK58 483 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Frs2Q8C180 508 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Zfp566Q8VCI1 386 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 CrebzfQ91ZR3 358 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rgs10Q9CQE5 181 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Q9D979 236 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tnfrsf10bQ9QZM4 381 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tdrd6P61407 2134 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm13276A0A087WR18 182 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Vmn2r-ps130A0A140T8U3 855 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ptpn9O35239 593 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Naa20P61600 178 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Hddc2Q3SXD3 199 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Fam117bQ3U3E2 584 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 G2e3Q5RJY2 716 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Avpr1aQ62463 423 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Nomo1Q6GQT9 1214 aaKnown RBP16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm7247Q6UY52 187 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Dhx33Q80VY9 698 aaKnown RBP16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Pyhin1Q8BV49 420 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Znf668Q8K2R5 619 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Vopp1Q8R1C3 172 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Rwdd4Q9CPR1 188 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tmem114Q9D563 222 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Tbc1d20Q9D9I4 402 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 CtsmQ9JL96 333 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Fiz1Q9WTJ4 500 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm12800B1AUV4 484 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Klhl4B1AZR0 717 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 F830016B08RikG3UWE2 416 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm12794L7MTS5 483 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Ctnnd2O35927 1247 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 BrafP28028 804 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Prox1P48437 737 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Faf2Q3TDN2 445 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Zbtb8osQ505B7 168 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 MogQ61885 246 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Fbxo33Q8VE08 562 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Usp3Q91W36 520 aaKnown RBP16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Basp1Q91XV3 226 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Bcas2Q9D287 225 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gipc1Q9Z0G0 333 aa16.3■□□□□ 0.2
Trim28-201ENSMUST00000005705 Gm5485A0A1D5RM98 91 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Dthd1E9PZX1 795 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Akain1G3UWD5 69 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 EgfP01132 1217 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 SpnP15702 395 aa16.29■□□□□ 0.2
Trim28-201ENSMUST00000005705 Nedd8P29595 81 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms