RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT1YKL145W RPB10P22139 70 aa6.76□□□□□ -1.33
RPT1YKL145W PRP40P33203 583 aaKnown RBP6.76□□□□□ -1.33
RPT1YKL145W IXR1P33417 597 aa6.76□□□□□ -1.33
RPT1YKL145W NPL4P33755 580 aa6.76□□□□□ -1.33
RPT1YKL145W TAT2P38967 592 aa6.76□□□□□ -1.33
RPT1YKL145W UBP9P39967 754 aa6.76□□□□□ -1.33
RPT1YKL145W YJL181WP46987 611 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-JR2P47099 440 aa6.76□□□□□ -1.33
RPT1YKL145W UFD2P54860 961 aa6.76□□□□□ -1.33
RPT1YKL145W SRT1Q03175 343 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-DR1Q03856 440 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-ML1Q04706 440 aaKnown RBP6.76□□□□□ -1.33
RPT1YKL145W TY1A-BRQ12217 440 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-NL2Q12470 440 aa6.76□□□□□ -1.33
RPT1YKL145W TY1A-GR2Q12485 440 aa6.76□□□□□ -1.33
RPT1YKL145W TRP5P00931 707 aaKnown RBP6.75□□□□□ -1.33
RPT1YKL145W RAD4P14736 754 aa6.75□□□□□ -1.33
RPT1YKL145W GCD6P32501 712 aaKnown RBP6.75□□□□□ -1.33
RPT1YKL145W PEP7P32609 515 aa6.75□□□□□ -1.33
RPT1YKL145W MNR2P35724 969 aa6.75□□□□□ -1.33
RPT1YKL145W YBR197CP38306 217 aa6.75□□□□□ -1.33
RPT1YKL145W YIL092WP40497 633 aa6.75□□□□□ -1.33
RPT1YKL145W CWH41P53008 833 aa6.75□□□□□ -1.33
RPT1YKL145W MTO1P53070 669 aa6.75□□□□□ -1.33
RPT1YKL145W NMA111P53920 997 aa6.75□□□□□ -1.33
RPT1YKL145W ISR1Q06098 443 aaKnown RBP6.75□□□□□ -1.33
RPT1YKL145W LYS2P07702 1392 aa6.75□□□□□ -1.33
RPT1YKL145W RAD2P07276 1031 aa6.74□□□□□ -1.33
RPT1YKL145W PDR1P12383 1068 aa6.74□□□□□ -1.33
RPT1YKL145W CYC8P14922 966 aa6.74□□□□□ -1.33
RPT1YKL145W ISC10P32645 267 aa6.74□□□□□ -1.33
RPT1YKL145W NGR1P32831 672 aaKnown RBP6.74□□□□□ -1.33
RPT1YKL145W EAP1P36041 632 aaKnown RBP6.74□□□□□ -1.33
RPT1YKL145W NPR2P39923 615 aa6.74□□□□□ -1.33
RPT1YKL145W YGR122WP53272 402 aa6.74□□□□□ -1.33
RPT1YKL145W ZDS2P54786 942 aa6.74□□□□□ -1.33
RPT1YKL145W RMT2Q03305 412 aa6.74□□□□□ -1.33
RPT1YKL145W VPS72Q03388 795 aa6.74□□□□□ -1.33
RPT1YKL145W HDA3Q06623 655 aa6.74□□□□□ -1.33
RPT1YKL145W CYT1P07143 309 aa6.73□□□□□ -1.33
RPT1YKL145W SEC2P17065 759 aa6.73□□□□□ -1.33
RPT1YKL145W KTR2P33550 425 aa6.73□□□□□ -1.33
RPT1YKL145W PET112P33893 541 aa6.73□□□□□ -1.33
RPT1YKL145W VPS35P34110 944 aa6.73□□□□□ -1.33
RPT1YKL145W PML39Q03760 334 aa6.73□□□□□ -1.33
RPT1YKL145W YOR131CQ12486 218 aa6.73□□□□□ -1.33
RPT1YKL145W GRX1P25373 110 aaKnown RBP6.72□□□□□ -1.33
RPT1YKL145W VAC17P25591 423 aa6.72□□□□□ -1.33
RPT1YKL145W MNN1P39106 762 aa6.72□□□□□ -1.33
RPT1YKL145W PEX29Q03370 554 aa6.72□□□□□ -1.33
RPT1YKL145W YOL057WQ08225 711 aa6.72□□□□□ -1.33
RPT1YKL145W PPM2Q08282 695 aa6.72□□□□□ -1.33
RPT1YKL145W PAC1P39946 494 aaKnown RBP6.71□□□□□ -1.34
RPT1YKL145W YJR142WP47173 342 aa6.71□□□□□ -1.34
RPT1YKL145W YGL081WP53156 320 aa6.71□□□□□ -1.34
RPT1YKL145W TOS4Q06266 489 aa6.71□□□□□ -1.34
RPT1YKL145W RPS6AP0CX37 236 aaKnown RBP6.7□□□□□ -1.34
RPT1YKL145W RPS6BP0CX38 236 aaPredicted RBP6.7□□□□□ -1.34
RPT1YKL145W BUD27P43573 796 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
RPT1YKL145W HUL5P53119 910 aa6.7□□□□□ -1.34
RPT1YKL145W CDC55Q00362 526 aa6.7□□□□□ -1.34
RPT1YKL145W VPS64Q03944 604 aa6.7□□□□□ -1.34
RPT1YKL145W BDS1Q08347 646 aa6.7□□□□□ -1.34
RPT1YKL145W YGR161W-CQ3E744 92 aa6.7□□□□□ -1.34
RPT1YKL145W MRP7P12687 371 aa6.69□□□□□ -1.34
RPT1YKL145W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
RPT1YKL145W LYS4P49367 693 aaPredicted RBP6.69□□□□□ -1.34
RPT1YKL145W CWC24P53769 259 aa6.69□□□□□ -1.34
RPT1YKL145W CSI1Q04368 295 aa6.69□□□□□ -1.34
RPT1YKL145W MET6P05694 767 aaKnown RBP6.68□□□□□ -1.34
RPT1YKL145W GCD11P32481 527 aaKnown RBP6.68□□□□□ -1.34
RPT1YKL145W RAD24P32641 659 aa6.68□□□□□ -1.34
RPT1YKL145W APL2P36000 726 aaPredicted RBP6.68□□□□□ -1.34
RPT1YKL145W NUP82P40368 713 aa6.68□□□□□ -1.34
RPT1YKL145W TPM2P40414 161 aa6.68□□□□□ -1.34
RPT1YKL145W TPO2P53283 614 aa6.68□□□□□ -1.34
RPT1YKL145W HXK1P04806 485 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W NOP2P40991 618 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W SAM37P50110 327 aa6.67□□□□□ -1.34
RPT1YKL145W KXD1P53158 218 aa6.67□□□□□ -1.34
RPT1YKL145W YNL011CP53980 444 aa6.67□□□□□ -1.34
RPT1YKL145W YDR306CQ06640 478 aa6.67□□□□□ -1.34
RPT1YKL145W SSP2Q08646 371 aa6.67□□□□□ -1.34
RPT1YKL145W UTP10P42945 1769 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W SWI5P08153 709 aa6.67□□□□□ -1.34
RPT1YKL145W SWC3P31376 625 aa6.67□□□□□ -1.34
RPT1YKL145W NUP133P36161 1157 aa6.67□□□□□ -1.34
RPT1YKL145W FAA3P39002 694 aa6.67□□□□□ -1.34
RPT1YKL145W UBP12P39538 1254 aa6.67□□□□□ -1.34
RPT1YKL145W HXT10P43581 546 aa6.67□□□□□ -1.34
RPT1YKL145W YFR016CP43597 1233 aaKnown RBP6.67□□□□□ -1.34
RPT1YKL145W YGL082WP53155 381 aa6.67□□□□□ -1.34
RPT1YKL145W DNM1P54861 757 aa6.67□□□□□ -1.34
RPT1YKL145W OXR1Q08952 273 aa6.67□□□□□ -1.34
RPT1YKL145W WSC3Q12215 556 aa6.67□□□□□ -1.34
RPT1YKL145W SWI1P09547 1314 aa6.66□□□□□ -1.34
RPT1YKL145W CIC1P38779 376 aaKnown RBP6.66□□□□□ -1.34
RPT1YKL145W FAA4P47912 694 aaKnown RBP6.66□□□□□ -1.34
RPT1YKL145W UTP14Q04500 899 aaKnown RBP6.66□□□□□ -1.34
RPT1YKL145W ATG20Q07528 640 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms