RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FBLN1P23142 703 aa17.3■□□□□ 0.36
PHGDH-220ENST00000641570 HOXC9P31274 260 aa17.3■□□□□ 0.36
PHGDH-220ENST00000641570 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
PHGDH-220ENST00000641570 IP6K1Q92551 441 aa17.3■□□□□ 0.36
PHGDH-220ENST00000641570 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-220ENST00000641570 NFAT5O94916 1531 aa17.3■□□□□ 0.36
PHGDH-220ENST00000641570 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
PHGDH-220ENST00000641570 NGLY1Q96IV0 654 aa17.29■□□□□ 0.36
PHGDH-220ENST00000641570 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-220ENST00000641570 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
PHGDH-220ENST00000641570 INSRP06213 1382 aa17.27■□□□□ 0.35
PHGDH-220ENST00000641570 ABCC6O95255 1503 aa17.26■□□□□ 0.35
PHGDH-220ENST00000641570 ANKRD24Q8TF21 1146 aa17.26■□□□□ 0.35
PHGDH-220ENST00000641570 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
PHGDH-220ENST00000641570 BTG4Q9NY30 223 aa17.26■□□□□ 0.35
PHGDH-220ENST00000641570 CCDC9Q9Y3X0 531 aaKnown RBP17.26■□□□□ 0.35
PHGDH-220ENST00000641570 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
PHGDH-220ENST00000641570 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
PHGDH-220ENST00000641570 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-220ENST00000641570 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
PHGDH-220ENST00000641570 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
PHGDH-220ENST00000641570 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-220ENST00000641570 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
PHGDH-220ENST00000641570 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
PHGDH-220ENST00000641570 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
PHGDH-220ENST00000641570 LTN1O94822 1766 aa17.23■□□□□ 0.35
PHGDH-220ENST00000641570 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
PHGDH-220ENST00000641570 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
PHGDH-220ENST00000641570 CRYBG1Q9Y4K1 1723 aa17.21■□□□□ 0.35
PHGDH-220ENST00000641570 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
PHGDH-220ENST00000641570 ERBB3P21860 1342 aa17.21■□□□□ 0.34
PHGDH-220ENST00000641570 MAP2P11137 1827 aaKnown RBP17.2■□□□□ 0.34
PHGDH-220ENST00000641570 USP21Q9UK80 565 aa17.2■□□□□ 0.34
PHGDH-220ENST00000641570 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
PHGDH-220ENST00000641570 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
PHGDH-220ENST00000641570 UNC5CLQ8IV45 518 aa17.18■□□□□ 0.34
PHGDH-220ENST00000641570 AFF2P51816 1311 aa17.18■□□□□ 0.34
PHGDH-220ENST00000641570 LRP6O75581 1613 aa17.18■□□□□ 0.34
PHGDH-220ENST00000641570 A0A0G2JS52 829 aa17.17■□□□□ 0.34
PHGDH-220ENST00000641570 IL13P35225 146 aa17.17■□□□□ 0.34
PHGDH-220ENST00000641570 MYT1Q01538 1121 aa17.17■□□□□ 0.34
PHGDH-220ENST00000641570 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
PHGDH-220ENST00000641570 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
PHGDH-220ENST00000641570 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
PHGDH-220ENST00000641570 COL5A2P05997 1499 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-220ENST00000641570 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
PHGDH-220ENST00000641570 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-220ENST00000641570 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
PHGDH-220ENST00000641570 CRB1P82279 1406 aa17.15■□□□□ 0.34
PHGDH-220ENST00000641570 HMOX1P09601 288 aa17.15■□□□□ 0.34
PHGDH-220ENST00000641570 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-220ENST00000641570 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-220ENST00000641570 LARP1Q6PKG0 1096 aaKnown RBP17.14■□□□□ 0.33
PHGDH-220ENST00000641570 TRPC5Q9UL62 973 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-220ENST00000641570 FCHSD2O94868 740 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 CCDC184Q52MB2 194 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 FNBP4Q8N3X1 1017 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-220ENST00000641570 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 EYA1Q99502 592 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
PHGDH-220ENST00000641570 SLIT2O94813 1529 aa17.12■□□□□ 0.33
PHGDH-220ENST00000641570 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
PHGDH-220ENST00000641570 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
PHGDH-220ENST00000641570 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
PHGDH-220ENST00000641570 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
PHGDH-220ENST00000641570 VPS72Q15906 364 aa17.11■□□□□ 0.33
PHGDH-220ENST00000641570 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
PHGDH-220ENST00000641570 TCP11L2Q8N4U5 519 aa17.11■□□□□ 0.33
PHGDH-220ENST00000641570 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
PHGDH-220ENST00000641570 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-220ENST00000641570 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
PHGDH-220ENST00000641570 THRAP3Q9Y2W1 955 aaKnown RBP17.11■□□□□ 0.33
PHGDH-220ENST00000641570 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
PHGDH-220ENST00000641570 IL2RBP14784 551 aa17.09■□□□□ 0.33
PHGDH-220ENST00000641570 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
PHGDH-220ENST00000641570 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
PHGDH-220ENST00000641570 PLEKHO1Q53GL0 409 aaPredicted RBP17.08■□□□□ 0.32
PHGDH-220ENST00000641570 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
PHGDH-220ENST00000641570 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.32
PHGDH-220ENST00000641570 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
PHGDH-220ENST00000641570 COL18A1P39060 1754 aa17.07■□□□□ 0.32
PHGDH-220ENST00000641570 SPATA31A5Q5VU36 1347 aa17.07■□□□□ 0.32
PHGDH-220ENST00000641570 SPATA31A7Q8IWB4 1347 aa17.07■□□□□ 0.32
PHGDH-220ENST00000641570 C1orf141Q5JVX7 400 aa17.07■□□□□ 0.32
PHGDH-220ENST00000641570 AEBP1Q8IUX7 1158 aa17.07■□□□□ 0.32
PHGDH-220ENST00000641570 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
PHGDH-220ENST00000641570 SPATA31A1Q5TZJ5 1347 aa17.06■□□□□ 0.32
PHGDH-220ENST00000641570 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
PHGDH-220ENST00000641570 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
PHGDH-220ENST00000641570 RTF1Q92541 710 aaKnown RBP17.05■□□□□ 0.32
PHGDH-220ENST00000641570 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
PHGDH-220ENST00000641570 KDRP35968 1356 aa17.04■□□□□ 0.32
PHGDH-220ENST00000641570 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-220ENST00000641570 YTHDC1Q96MU7 727 aaKnown RBP17.04■□□□□ 0.32
PHGDH-220ENST00000641570 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
PHGDH-220ENST00000641570 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
PHGDH-220ENST00000641570 HNRNPUQ00839 825 aaKnown RBP eCLIP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms