RNA–Protein interactions for RNA: ENST00000640946.1

PRICKLE1-221, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 2

Gene PRICKLE1, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-221ENST00000640946 NRKQ7Z2Y5 1582 aa11.03□□□□□ -0.64
PRICKLE1-221ENST00000640946 EDC4Q6P2E9 1401 aaKnown RBP11.03□□□□□ -0.64
PRICKLE1-221ENST00000640946 HDGFL2Q7Z4V5 671 aaPredicted RBP11.03□□□□□ -0.64
PRICKLE1-221ENST00000640946 PRDM11Q9NQV5 511 aa11.03□□□□□ -0.64
PRICKLE1-221ENST00000640946 PEAK1Q9H792 1746 aa11.03□□□□□ -0.64
PRICKLE1-221ENST00000640946 TTC21BQ7Z4L5 1316 aa11.03□□□□□ -0.64
PRICKLE1-221ENST00000640946 CASZ1Q86V15 1759 aa11.03□□□□□ -0.64
PRICKLE1-221ENST00000640946 WASHC2AQ641Q2 1341 aa11.02□□□□□ -0.65
PRICKLE1-221ENST00000640946 USP31Q70CQ4 1352 aa11.02□□□□□ -0.65
PRICKLE1-221ENST00000640946 CCDC7Q96M83 1385 aa11.02□□□□□ -0.65
PRICKLE1-221ENST00000640946 BARGINQ6ZT62 677 aa11.01□□□□□ -0.65
PRICKLE1-221ENST00000640946 CARD14Q9BXL6 1004 aa11.01□□□□□ -0.65
PRICKLE1-221ENST00000640946 STRN4Q9NRL3 753 aa11.01□□□□□ -0.65
PRICKLE1-221ENST00000640946 USP19O94966 1318 aa11.01□□□□□ -0.65
PRICKLE1-221ENST00000640946 PARP4Q9UKK3 1724 aaKnown RBP11.01□□□□□ -0.65
PRICKLE1-221ENST00000640946 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
PRICKLE1-221ENST00000640946 NLRP13Q86W25 1043 aa11□□□□□ -0.65
PRICKLE1-221ENST00000640946 ABTB2Q8N961 1025 aa11□□□□□ -0.65
PRICKLE1-221ENST00000640946 USP54Q70EL1 1684 aa11□□□□□ -0.65
PRICKLE1-221ENST00000640946 SBF2Q86WG5 1849 aa11□□□□□ -0.65
PRICKLE1-221ENST00000640946 RGPD3A6NKT7 1758 aaPredicted RBP10.99□□□□□ -0.65
PRICKLE1-221ENST00000640946 RGPD4Q7Z3J3 1758 aa10.99□□□□□ -0.65
PRICKLE1-221ENST00000640946 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
PRICKLE1-221ENST00000640946 LARP1Q6PKG0 1096 aaKnown RBP10.99□□□□□ -0.65
PRICKLE1-221ENST00000640946 USP35Q9P2H5 1018 aa10.99□□□□□ -0.65
PRICKLE1-221ENST00000640946 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
PRICKLE1-221ENST00000640946 PER1O15534 1290 aaPredicted RBP10.98□□□□□ -0.65
PRICKLE1-221ENST00000640946 KCNQ2O43526 872 aa10.98□□□□□ -0.65
PRICKLE1-221ENST00000640946 NUTM2GQ5VZR2 741 aa10.98□□□□□ -0.65
PRICKLE1-221ENST00000640946 PDGFDQ9GZP0 370 aaPredicted RBP10.98□□□□□ -0.65
PRICKLE1-221ENST00000640946 PANK3Q9H999 370 aa10.98□□□□□ -0.65
PRICKLE1-221ENST00000640946 FYB1O15117 783 aa10.97□□□□□ -0.65
PRICKLE1-221ENST00000640946 NLRP6P59044 892 aa10.97□□□□□ -0.65
PRICKLE1-221ENST00000640946 PTF1AQ7RTS3 328 aa10.97□□□□□ -0.65
PRICKLE1-221ENST00000640946 SPON1Q9HCB6 807 aa10.97□□□□□ -0.65
PRICKLE1-221ENST00000640946 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
PRICKLE1-221ENST00000640946 SLIT3O75094 1523 aa10.97□□□□□ -0.65
PRICKLE1-221ENST00000640946 LRRC37A3O60309 1634 aa10.97□□□□□ -0.65
PRICKLE1-221ENST00000640946 COL5A2P05997 1499 aaPredicted RBP10.96□□□□□ -0.65
PRICKLE1-221ENST00000640946 OVOS2A0A0J9YW53 1432 aa10.96□□□□□ -0.65
PRICKLE1-221ENST00000640946 OVOS2Q6IE36 1432 aa10.96□□□□□ -0.65
PRICKLE1-221ENST00000640946 CPDO75976 1380 aa10.96□□□□□ -0.65
PRICKLE1-221ENST00000640946 GCP02774 474 aa10.96□□□□□ -0.65
PRICKLE1-221ENST00000640946 NME9Q86XW9 330 aa10.96□□□□□ -0.65
PRICKLE1-221ENST00000640946 NSD3Q9BZ95 1437 aa10.95□□□□□ -0.66
PRICKLE1-221ENST00000640946 PDE3BQ13370 1112 aa10.95□□□□□ -0.66
PRICKLE1-221ENST00000640946 NBPF14Q5TI25 921 aa10.95□□□□□ -0.66
PRICKLE1-221ENST00000640946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
PRICKLE1-221ENST00000640946 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
PRICKLE1-221ENST00000640946 KCNH5Q8NCM2 988 aa10.95□□□□□ -0.66
PRICKLE1-221ENST00000640946 CGNL1Q0VF96 1302 aa10.94□□□□□ -0.66
PRICKLE1-221ENST00000640946 WNK3Q9BYP7 1800 aa10.94□□□□□ -0.66
PRICKLE1-221ENST00000640946 PTGER2P43116 358 aa10.94□□□□□ -0.66
PRICKLE1-221ENST00000640946 PROM2Q8N271 834 aa10.94□□□□□ -0.66
PRICKLE1-221ENST00000640946 POLR3GLQ9BT43 218 aa10.94□□□□□ -0.66
PRICKLE1-221ENST00000640946 PPP1R1BQ9UD71 204 aaPredicted RBP10.94□□□□□ -0.66
PRICKLE1-221ENST00000640946 NPC1L1Q9UHC9 1359 aa10.93□□□□□ -0.66
PRICKLE1-221ENST00000640946 EVA1CP58658 441 aa10.93□□□□□ -0.66
PRICKLE1-221ENST00000640946 ZNF784Q8NCA9 323 aaPredicted RBP10.93□□□□□ -0.66
PRICKLE1-221ENST00000640946 NFAT5O94916 1531 aa10.93□□□□□ -0.66
PRICKLE1-221ENST00000640946 COL18A1P39060 1754 aa10.93□□□□□ -0.66
PRICKLE1-221ENST00000640946 NSD2O96028 1365 aa10.92□□□□□ -0.66
PRICKLE1-221ENST00000640946 PLSCR1O15162 318 aa10.92□□□□□ -0.66
PRICKLE1-221ENST00000640946 ARHGEF25Q86VW2 580 aa10.92□□□□□ -0.66
PRICKLE1-221ENST00000640946 COG3Q96JB2 828 aa10.92□□□□□ -0.66
PRICKLE1-221ENST00000640946 THRAP3Q9Y2W1 955 aaKnown RBP10.92□□□□□ -0.66
PRICKLE1-221ENST00000640946 OVOS2A0A0G2JMS6 1433 aa10.92□□□□□ -0.66
PRICKLE1-221ENST00000640946 GGNBP2Q9H3C7 697 aa10.91□□□□□ -0.66
PRICKLE1-221ENST00000640946 KNSTRNQ9Y448 316 aa10.91□□□□□ -0.66
PRICKLE1-221ENST00000640946 CRB1P82279 1406 aa10.91□□□□□ -0.66
PRICKLE1-221ENST00000640946 KIF20BQ96Q89 1820 aa10.91□□□□□ -0.66
PRICKLE1-221ENST00000640946 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.66
PRICKLE1-221ENST00000640946 KCNA4P22459 653 aa10.9□□□□□ -0.66
PRICKLE1-221ENST00000640946 ABCC6O95255 1503 aa10.89□□□□□ -0.67
PRICKLE1-221ENST00000640946 ZNF316A6NFI3 1004 aaPredicted RBP10.89□□□□□ -0.67
PRICKLE1-221ENST00000640946 ZBTB7AO95365 584 aa10.89□□□□□ -0.67
PRICKLE1-221ENST00000640946 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
PRICKLE1-221ENST00000640946 GOLGB1Q14789 3259 aaKnown RBP10.89□□□□□ -0.67
PRICKLE1-221ENST00000640946 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
PRICKLE1-221ENST00000640946 BCL9O00512 1426 aa10.88□□□□□ -0.67
PRICKLE1-221ENST00000640946 MARCH10Q8NA82 808 aaPredicted RBP10.88□□□□□ -0.67
PRICKLE1-221ENST00000640946 BCL11BQ9C0K0 894 aaPredicted RBP10.88□□□□□ -0.67
PRICKLE1-221ENST00000640946 ANKRD26Q9UPS8 1709 aa10.88□□□□□ -0.67
PRICKLE1-221ENST00000640946 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
PRICKLE1-221ENST00000640946 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
PRICKLE1-221ENST00000640946 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
PRICKLE1-221ENST00000640946 AXIN2Q9Y2T1 843 aa10.87□□□□□ -0.67
PRICKLE1-221ENST00000640946 CHD4Q14839 1912 aa10.87□□□□□ -0.67
PRICKLE1-221ENST00000640946 RGPD5Q99666 1765 aa10.87□□□□□ -0.67
PRICKLE1-221ENST00000640946 PAPPAQ13219 1627 aa10.87□□□□□ -0.67
PRICKLE1-221ENST00000640946 IP6K1Q92551 441 aa10.86□□□□□ -0.67
PRICKLE1-221ENST00000640946 MAP3K19Q56UN5 1328 aa10.85□□□□□ -0.67
PRICKLE1-221ENST00000640946 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
PRICKLE1-221ENST00000640946 DDB1Q16531 1140 aa10.85□□□□□ -0.67
PRICKLE1-221ENST00000640946 CEP350Q5VT06 3117 aa10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 FBLN1P23142 703 aa10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 C1QTNF8P60827 252 aa10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 DDX10Q13206 875 aaKnown RBP10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 TXNRD1Q16881 649 aa10.84□□□□□ -0.67
PRICKLE1-221ENST00000640946 POLKQ9UBT6 870 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms