RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 OVOS2A0A0J9YW53 1432 aa12.26□□□□□ -0.45
SCARB2-226ENST00000640916 OVOS2Q6IE36 1432 aa12.26□□□□□ -0.45
SCARB2-226ENST00000640916 ATP7BP35670 1465 aa12.26□□□□□ -0.45
SCARB2-226ENST00000640916 ADGRB1O14514 1584 aa12.26□□□□□ -0.45
SCARB2-226ENST00000640916 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
SCARB2-226ENST00000640916 MAP3K5Q99683 1374 aa12.25□□□□□ -0.45
SCARB2-226ENST00000640916 CPDO75976 1380 aa12.24□□□□□ -0.45
SCARB2-226ENST00000640916 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
SCARB2-226ENST00000640916 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
SCARB2-226ENST00000640916 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
SCARB2-226ENST00000640916 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
SCARB2-226ENST00000640916 COL5A2P05997 1499 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-226ENST00000640916 MINK1Q8N4C8 1332 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-226ENST00000640916 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-226ENST00000640916 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
SCARB2-226ENST00000640916 SLC15A2Q16348 729 aa12.23□□□□□ -0.45
SCARB2-226ENST00000640916 MTFR1LQ9H019 292 aa12.23□□□□□ -0.45
SCARB2-226ENST00000640916 POGKQ9P215 609 aa12.23□□□□□ -0.45
SCARB2-226ENST00000640916 BCL9O00512 1426 aa12.22□□□□□ -0.45
SCARB2-226ENST00000640916 TXNRD1Q16881 649 aa12.22□□□□□ -0.45
SCARB2-226ENST00000640916 COL24A1Q17RW2 1714 aa12.22□□□□□ -0.45
SCARB2-226ENST00000640916 AKAP12Q02952 1782 aa12.21□□□□□ -0.45
SCARB2-226ENST00000640916 ARXQ96QS3 562 aa12.21□□□□□ -0.45
SCARB2-226ENST00000640916 PAPPAQ13219 1627 aa12.21□□□□□ -0.46
SCARB2-226ENST00000640916 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
SCARB2-226ENST00000640916 USP19O94966 1318 aa12.2□□□□□ -0.46
SCARB2-226ENST00000640916 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
SCARB2-226ENST00000640916 MARCH10Q8NA82 808 aaPredicted RBP12.2□□□□□ -0.46
SCARB2-226ENST00000640916 CRB1P82279 1406 aa12.2□□□□□ -0.46
SCARB2-226ENST00000640916 TOPAZ1Q8N9V7 1692 aa12.19□□□□□ -0.46
SCARB2-226ENST00000640916 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
SCARB2-226ENST00000640916 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
SCARB2-226ENST00000640916 COL18A1P39060 1754 aa12.19□□□□□ -0.46
SCARB2-226ENST00000640916 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
SCARB2-226ENST00000640916 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
SCARB2-226ENST00000640916 GPR162Q16538 588 aa12.18□□□□□ -0.46
SCARB2-226ENST00000640916 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
SCARB2-226ENST00000640916 DDB1Q16531 1140 aa12.17□□□□□ -0.46
SCARB2-226ENST00000640916 GCP02774 474 aa12.16□□□□□ -0.46
SCARB2-226ENST00000640916 ARHGEF28Q8N1W1 1705 aaKnown RBP12.16□□□□□ -0.46
SCARB2-226ENST00000640916 ACEP12821 1306 aa12.15□□□□□ -0.46
SCARB2-226ENST00000640916 MPHOSPH9Q99550 1183 aa12.15□□□□□ -0.46
SCARB2-226ENST00000640916 RGPD5Q99666 1765 aa12.15□□□□□ -0.46
SCARB2-226ENST00000640916 ABTB2Q8N961 1025 aa12.14□□□□□ -0.47
SCARB2-226ENST00000640916 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
SCARB2-226ENST00000640916 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
SCARB2-226ENST00000640916 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
SCARB2-226ENST00000640916 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCARB2-226ENST00000640916 HSPA6P17066 643 aa12.13□□□□□ -0.47
SCARB2-226ENST00000640916 ZNF827Q17R98 1081 aa12.13□□□□□ -0.47
SCARB2-226ENST00000640916 NLGN2Q8NFZ4 835 aa12.13□□□□□ -0.47
SCARB2-226ENST00000640916 TUBGCP6Q96RT7 1819 aa12.12□□□□□ -0.47
SCARB2-226ENST00000640916 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
SCARB2-226ENST00000640916 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
SCARB2-226ENST00000640916 BTAF1O14981 1849 aa12.11□□□□□ -0.47
SCARB2-226ENST00000640916 SLIT3O75094 1523 aa12.11□□□□□ -0.47
SCARB2-226ENST00000640916 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
SCARB2-226ENST00000640916 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
SCARB2-226ENST00000640916 LRRC4BQ9NT99 713 aa12.1□□□□□ -0.47
SCARB2-226ENST00000640916 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
SCARB2-226ENST00000640916 TOM1L2Q6ZVM7 507 aa12.09□□□□□ -0.47
SCARB2-226ENST00000640916 PELP1Q8IZL8 1130 aaKnown RBP12.09□□□□□ -0.47
SCARB2-226ENST00000640916 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
SCARB2-226ENST00000640916 WDR17Q8IZU2 1322 aa12.09□□□□□ -0.47
SCARB2-226ENST00000640916 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
SCARB2-226ENST00000640916 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
SCARB2-226ENST00000640916 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
SCARB2-226ENST00000640916 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
SCARB2-226ENST00000640916 ADCY9O60503 1353 aa12.07□□□□□ -0.48
SCARB2-226ENST00000640916 CDCA7Q9BWT1 371 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-226ENST00000640916 TRPM1Q7Z4N2 1603 aa12.07□□□□□ -0.48
SCARB2-226ENST00000640916 KLHL34Q8N239 644 aa12.06□□□□□ -0.48
SCARB2-226ENST00000640916 DNAJC5GQ8N7S2 189 aa12.06□□□□□ -0.48
SCARB2-226ENST00000640916 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
SCARB2-226ENST00000640916 PNPLA7Q6ZV29 1317 aa12.06□□□□□ -0.48
SCARB2-226ENST00000640916 ZBTB7CA1YPR0 619 aa12.05□□□□□ -0.48
SCARB2-226ENST00000640916 GRIN3BO60391 1043 aa12.05□□□□□ -0.48
SCARB2-226ENST00000640916 FKBP8Q14318 412 aa12.05□□□□□ -0.48
SCARB2-226ENST00000640916 ACSBG1Q96GR2 724 aa12.05□□□□□ -0.48
SCARB2-226ENST00000640916 CARD10Q9BWT7 1032 aa12.05□□□□□ -0.48
SCARB2-226ENST00000640916 PIK3C2AO00443 1686 aa12.05□□□□□ -0.48
SCARB2-226ENST00000640916 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
SCARB2-226ENST00000640916 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
SCARB2-226ENST00000640916 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
SCARB2-226ENST00000640916 EXOC5O00471 708 aa12.04□□□□□ -0.48
SCARB2-226ENST00000640916 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-226ENST00000640916 USP6P35125 1406 aa12.03□□□□□ -0.48
SCARB2-226ENST00000640916 ABCC6O95255 1503 aa12.03□□□□□ -0.48
SCARB2-226ENST00000640916 ARHGEF25Q86VW2 580 aa12.03□□□□□ -0.48
SCARB2-226ENST00000640916 CPSF1Q10570 1443 aaKnown RBP12.03□□□□□ -0.48
SCARB2-226ENST00000640916 KIF3CO14782 793 aa12.02□□□□□ -0.49
SCARB2-226ENST00000640916 POLD1P28340 1107 aa12.02□□□□□ -0.49
SCARB2-226ENST00000640916 NLRP6P59044 892 aa12.02□□□□□ -0.49
SCARB2-226ENST00000640916 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.49
SCARB2-226ENST00000640916 BRD4O60885 1362 aaPredicted RBP12.02□□□□□ -0.49
SCARB2-226ENST00000640916 PPIP5K1Q6PFW1 1433 aa12.02□□□□□ -0.49
SCARB2-226ENST00000640916 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
SCARB2-226ENST00000640916 DCAF11Q8TEB1 546 aa12□□□□□ -0.49
SCARB2-226ENST00000640916 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
SCARB2-226ENST00000640916 RBM42Q9BTD8 480 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms