RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 MNAT1P51948 309 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 NEXNQ0ZGT2 675 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
NECAP1-227ENST00000640648 TSR2Q969E8 191 aaKnown RBP9.8□□□□□ -0.84
NECAP1-227ENST00000640648 ATAD2Q6PL18 1390 aa9.79□□□□□ -0.84
NECAP1-227ENST00000640648 TSR1Q2NL82 804 aaKnown RBP9.79□□□□□ -0.84
NECAP1-227ENST00000640648 COG3Q96JB2 828 aa9.79□□□□□ -0.84
NECAP1-227ENST00000640648 SWAP70Q9UH65 585 aa9.79□□□□□ -0.84
NECAP1-227ENST00000640648 K7ELQ4 463 aaPredicted RBP9.79□□□□□ -0.84
NECAP1-227ENST00000640648 PRPF40AO75400 957 aaKnown RBP9.79□□□□□ -0.84
NECAP1-227ENST00000640648 EXOSC9Q06265 439 aaKnown RBP9.79□□□□□ -0.84
NECAP1-227ENST00000640648 IQCEQ6IPM2 695 aa9.79□□□□□ -0.84
NECAP1-227ENST00000640648 ANO2Q9NQ90 1003 aa9.79□□□□□ -0.84
NECAP1-227ENST00000640648 CCDC196A0A1B0GTZ2 297 aa9.78□□□□□ -0.84
NECAP1-227ENST00000640648 AFAP1Q8N556 730 aa9.78□□□□□ -0.84
NECAP1-227ENST00000640648 MKRN1Q9UHC7 482 aaKnown RBP9.78□□□□□ -0.84
NECAP1-227ENST00000640648 PRG4Q92954 1404 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-227ENST00000640648 EZRP15311 586 aaKnown RBP9.78□□□□□ -0.84
NECAP1-227ENST00000640648 ERCC3P19447 782 aa9.78□□□□□ -0.84
NECAP1-227ENST00000640648 GPATCH3Q96I76 525 aa9.78□□□□□ -0.84
NECAP1-227ENST00000640648 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
NECAP1-227ENST00000640648 C1orf115Q9H7X2 142 aa9.78□□□□□ -0.84
NECAP1-227ENST00000640648 INTS3Q68E01 1043 aaKnown RBP9.78□□□□□ -0.84
NECAP1-227ENST00000640648 POTEDQ86YR6 584 aa9.78□□□□□ -0.84
NECAP1-227ENST00000640648 SMTNL1A8MU46 457 aa9.77□□□□□ -0.84
NECAP1-227ENST00000640648 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.84
NECAP1-227ENST00000640648 HOOK1Q9UJC3 728 aaKnown RBP9.77□□□□□ -0.84
NECAP1-227ENST00000640648 ZMYM3Q14202 1370 aa9.77□□□□□ -0.84
NECAP1-227ENST00000640648 KIF3CO14782 793 aa9.77□□□□□ -0.85
NECAP1-227ENST00000640648 MAP2K2P36507 400 aa9.77□□□□□ -0.85
NECAP1-227ENST00000640648 RNF214Q8ND24 703 aa9.77□□□□□ -0.85
NECAP1-227ENST00000640648 PPP1R9BQ96SB3 815 aa9.77□□□□□ -0.85
NECAP1-227ENST00000640648 GEMIN8Q9NWZ8 242 aaKnown RBP9.77□□□□□ -0.85
NECAP1-227ENST00000640648 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-227ENST00000640648 PTPN14Q15678 1187 aa9.77□□□□□ -0.85
NECAP1-227ENST00000640648 GBP6Q6ZN66 633 aa9.77□□□□□ -0.85
NECAP1-227ENST00000640648 XPCQ01831 940 aaPredicted RBP9.76□□□□□ -0.85
NECAP1-227ENST00000640648 EHBP1L1Q8N3D4 1523 aa9.76□□□□□ -0.85
NECAP1-227ENST00000640648 NOLC1Q14978 699 aaKnown RBP eCLIP9.76□□□□□ -0.85
NECAP1-227ENST00000640648 IPO7O95373 1038 aaKnown RBP9.76□□□□□ -0.85
NECAP1-227ENST00000640648 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
NECAP1-227ENST00000640648 NESP48681 1621 aa9.76□□□□□ -0.85
NECAP1-227ENST00000640648 EIF2S2P20042 333 aaKnown RBP9.76□□□□□ -0.85
NECAP1-227ENST00000640648 AP1ARQ63HQ0 302 aa9.76□□□□□ -0.85
NECAP1-227ENST00000640648 EFCAB5A4FU69 1503 aa9.76□□□□□ -0.85
NECAP1-227ENST00000640648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-227ENST00000640648 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 GSDMDP57764 484 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 WDR33Q9C0J8 1336 aaKnown RBP9.75□□□□□ -0.85
NECAP1-227ENST00000640648 DAPK1P53355 1430 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 ANKRD18BA2A2Z9 1011 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 CT47B1P0C2W7 299 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-227ENST00000640648 ZNF853P0CG23 659 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 SLC20A2Q08357 652 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 CCDC38Q502W7 563 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 DNAJC21Q5F1R6 531 aaKnown RBP9.75□□□□□ -0.85
NECAP1-227ENST00000640648 GORABQ5T7V8 394 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 TRIM5Q9C035 493 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.75□□□□□ -0.85
NECAP1-227ENST00000640648 PCF11O94913 1555 aaKnown RBP9.75□□□□□ -0.85
NECAP1-227ENST00000640648 CDC45O75419 566 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
NECAP1-227ENST00000640648 C9orf84Q5VXU9 1444 aa9.75□□□□□ -0.85
NECAP1-227ENST00000640648 AKAP17AQ02040 695 aaKnown RBP9.74□□□□□ -0.85
NECAP1-227ENST00000640648 ANKRD30BQ9BXX2 1392 aa9.74□□□□□ -0.85
NECAP1-227ENST00000640648 PDCP20941 246 aa9.74□□□□□ -0.85
NECAP1-227ENST00000640648 CBFA2T2O43439 604 aa9.74□□□□□ -0.85
NECAP1-227ENST00000640648 ATP8B1O43520 1251 aa9.74□□□□□ -0.85
NECAP1-227ENST00000640648 RBBP5Q15291 538 aaKnown RBP9.74□□□□□ -0.85
NECAP1-227ENST00000640648 CDK13Q14004 1512 aaKnown RBP9.74□□□□□ -0.85
NECAP1-227ENST00000640648 ROCK1Q13464 1354 aa9.74□□□□□ -0.85
NECAP1-227ENST00000640648 ZSCAN12O43309 604 aa9.74□□□□□ -0.85
NECAP1-227ENST00000640648 GNAI1P63096 354 aa9.74□□□□□ -0.85
NECAP1-227ENST00000640648 NPHP1O15259 732 aa9.73□□□□□ -0.85
NECAP1-227ENST00000640648 CCAR2Q8N163 923 aaKnown RBP9.73□□□□□ -0.85
NECAP1-227ENST00000640648 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
NECAP1-227ENST00000640648 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-227ENST00000640648 NOB1Q9ULX3 412 aaKnown RBP9.73□□□□□ -0.85
NECAP1-227ENST00000640648 POLA1P09884 1462 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-227ENST00000640648 LRSAM1Q6UWE0 723 aa9.73□□□□□ -0.85
NECAP1-227ENST00000640648 SPATS2Q86XZ4 545 aaKnown RBP9.73□□□□□ -0.85
NECAP1-227ENST00000640648 TICAM2Q86XR7 235 aa9.73□□□□□ -0.85
NECAP1-227ENST00000640648 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.73□□□□□ -0.85
NECAP1-227ENST00000640648 SNX21Q969T3 373 aa9.73□□□□□ -0.85
NECAP1-227ENST00000640648 RSRC1Q96IZ7 334 aaKnown RBP9.73□□□□□ -0.85
NECAP1-227ENST00000640648 STAC3Q96MF2 364 aa9.73□□□□□ -0.85
NECAP1-227ENST00000640648 VPS37CA5D8V6 355 aaPredicted RBP9.72□□□□□ -0.85
NECAP1-227ENST00000640648 ERBINQ96RT1 1412 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 H3BQV1 296 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 PRKAR2BP31323 418 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 SLFN5Q08AF3 891 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 SF3A1Q15459 793 aaKnown RBP9.72□□□□□ -0.85
NECAP1-227ENST00000640648 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 IBTKQ9P2D0 1353 aaPredicted RBP9.72□□□□□ -0.85
NECAP1-227ENST00000640648 CCDC183Q5T5S1 534 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 NCOA1Q15788 1441 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 SMC2O95347 1197 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 TNNT1P13805 278 aa9.72□□□□□ -0.85
NECAP1-227ENST00000640648 MAPK8IP2Q13387 824 aaPredicted RBP9.71□□□□□ -0.85
NECAP1-227ENST00000640648 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms