RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 KIF24Q5T7B8 1368 aa29.14■■■□□ 2.26
TSPAN9-208ENST00000640568 NWD2Q9ULI1 1742 aa29.14■■■□□ 2.26
TSPAN9-208ENST00000640568 FLT4P35916 1363 aa29.14■■■□□ 2.25
TSPAN9-208ENST00000640568 LMO7Q8WWI1 1683 aa29.14■■■□□ 2.25
TSPAN9-208ENST00000640568 PPP2R1AP30153 589 aa29.13■■■□□ 2.25
TSPAN9-208ENST00000640568 SMG6Q86US8 1419 aaKnown RBP29.13■■■□□ 2.25
TSPAN9-208ENST00000640568 MYBBP1AQ9BQG0 1328 aaKnown RBP29.12■■■□□ 2.25
TSPAN9-208ENST00000640568 HOXC9P31274 260 aa29.11■■■□□ 2.25
TSPAN9-208ENST00000640568 IP6K1Q92551 441 aa29.11■■■□□ 2.25
TSPAN9-208ENST00000640568 MTHFSP49914 203 aa29.1■■■□□ 2.25
TSPAN9-208ENST00000640568 BTG4Q9NY30 223 aa29.1■■■□□ 2.25
TSPAN9-208ENST00000640568 BLMP54132 1417 aaPredicted RBP29.1■■■□□ 2.25
TSPAN9-208ENST00000640568 CDK12Q9NYV4 1490 aaPredicted RBP29.1■■■□□ 2.25
TSPAN9-208ENST00000640568 CAMTA1Q9Y6Y1 1673 aa29.08■■■□□ 2.25
TSPAN9-208ENST00000640568 SLIT2O94813 1529 aa29.07■■■□□ 2.24
TSPAN9-208ENST00000640568 NRAPQ86VF7 1730 aa29.07■■■□□ 2.24
TSPAN9-208ENST00000640568 EVA1CP58658 441 aa29.06■■■□□ 2.24
TSPAN9-208ENST00000640568 AXIN2Q9Y2T1 843 aa29.06■■■□□ 2.24
TSPAN9-208ENST00000640568 AFF2P51816 1311 aa29.05■■■□□ 2.24
TSPAN9-208ENST00000640568 HSP90AB2PQ58FF8 381 aa29.05■■■□□ 2.24
TSPAN9-208ENST00000640568 CFAP53Q96M91 514 aa29.05■■■□□ 2.24
TSPAN9-208ENST00000640568 INSRP06213 1382 aa29.05■■■□□ 2.24
TSPAN9-208ENST00000640568 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.04■■■□□ 2.24
TSPAN9-208ENST00000640568 STRN4Q9NRL3 753 aa29.04■■■□□ 2.24
TSPAN9-208ENST00000640568 COL5A2P05997 1499 aaPredicted RBP29.04■■■□□ 2.24
TSPAN9-208ENST00000640568 FNBP4Q8N3X1 1017 aaPredicted RBP29.04■■■□□ 2.24
TSPAN9-208ENST00000640568 LTV1Q96GA3 475 aaPredicted RBP29.04■■■□□ 2.24
TSPAN9-208ENST00000640568 USP21Q9UK80 565 aa29.04■■■□□ 2.24
TSPAN9-208ENST00000640568 FAM208AQ9UK61 1670 aaKnown RBP29.03■■■□□ 2.24
TSPAN9-208ENST00000640568 CSB-PGBD3P0DP91 1061 aa29.03■■■□□ 2.24
TSPAN9-208ENST00000640568 ANKRD24Q8TF21 1146 aa29.02■■■□□ 2.24
TSPAN9-208ENST00000640568 PHF23Q9BUL5 403 aaPredicted RBP29.02■■■□□ 2.24
TSPAN9-208ENST00000640568 UNC5CLQ8IV45 518 aa29.01■■■□□ 2.23
TSPAN9-208ENST00000640568 ERBB3P21860 1342 aa29■■■□□ 2.23
TSPAN9-208ENST00000640568 BCL9LQ86UU0 1499 aa28.98■■■□□ 2.23
TSPAN9-208ENST00000640568 RGPD2P0DJD1 1756 aa28.98■■■□□ 2.23
TSPAN9-208ENST00000640568 WDR17Q8IZU2 1322 aa28.97■■■□□ 2.23
TSPAN9-208ENST00000640568 ZNF772Q68DY9 489 aaPredicted RBP28.96■■■□□ 2.23
TSPAN9-208ENST00000640568 TOM1L2Q6ZVM7 507 aa28.96■■■□□ 2.23
TSPAN9-208ENST00000640568 CCDC9Q9Y3X0 531 aaKnown RBP28.96■■■□□ 2.23
TSPAN9-208ENST00000640568 DIAPH1O60610 1272 aaKnown RBP28.95■■■□□ 2.22
TSPAN9-208ENST00000640568 EIF4A2Q14240 407 aaKnown RBP28.95■■■□□ 2.22
TSPAN9-208ENST00000640568 COL3A1P02461 1466 aaPredicted RBP28.94■■■□□ 2.22
TSPAN9-208ENST00000640568 LARP1Q6PKG0 1096 aaKnown RBP28.93■■■□□ 2.22
TSPAN9-208ENST00000640568 CRB1P82279 1406 aa28.93■■■□□ 2.22
TSPAN9-208ENST00000640568 NLRP2Q9NX02 1062 aa28.92■■■□□ 2.22
TSPAN9-208ENST00000640568 TRPC5Q9UL62 973 aaPredicted RBP28.92■■■□□ 2.22
TSPAN9-208ENST00000640568 VPS72Q15906 364 aa28.91■■■□□ 2.22
TSPAN9-208ENST00000640568 NUDCQ9Y266 331 aa28.91■■■□□ 2.22
TSPAN9-208ENST00000640568 IL13P35225 146 aa28.89■■■□□ 2.22
TSPAN9-208ENST00000640568 ATRNO75882 1429 aa28.89■■■□□ 2.21
TSPAN9-208ENST00000640568 QTRT2Q9H974 415 aaKnown RBP28.88■■■□□ 2.21
TSPAN9-208ENST00000640568 USP35Q9P2H5 1018 aa28.88■■■□□ 2.21
TSPAN9-208ENST00000640568 U2SURPO15042 1029 aaKnown RBP28.87■■■□□ 2.21
TSPAN9-208ENST00000640568 MRS2Q9HD23 443 aa28.87■■■□□ 2.21
TSPAN9-208ENST00000640568 MIER1Q8N108 512 aa28.86■■■□□ 2.21
TSPAN9-208ENST00000640568 CARD10Q9BWT7 1032 aa28.86■■■□□ 2.21
TSPAN9-208ENST00000640568 RGPD1P0DJD0 1748 aa28.86■■■□□ 2.21
TSPAN9-208ENST00000640568 NBPF6Q5VWK0 638 aa28.85■■■□□ 2.21
TSPAN9-208ENST00000640568 NBPF4Q96M43 638 aa28.85■■■□□ 2.21
TSPAN9-208ENST00000640568 EYA1Q99502 592 aa28.85■■■□□ 2.21
TSPAN9-208ENST00000640568 SPATA31A5Q5VU36 1347 aa28.85■■■□□ 2.21
TSPAN9-208ENST00000640568 SPATA31A7Q8IWB4 1347 aa28.85■■■□□ 2.21
TSPAN9-208ENST00000640568 SPATA31A1Q5TZJ5 1347 aa28.84■■■□□ 2.21
TSPAN9-208ENST00000640568 WNK3Q9BYP7 1800 aa28.83■■■□□ 2.21
TSPAN9-208ENST00000640568 USHBP1Q8N6Y0 703 aa28.83■■■□□ 2.21
TSPAN9-208ENST00000640568 IGSF1Q8N6C5 1336 aa28.82■■■□□ 2.2
TSPAN9-208ENST00000640568 TCP11L2Q8N4U5 519 aa28.82■■■□□ 2.2
TSPAN9-208ENST00000640568 GJD4Q96KN9 370 aaPredicted RBP28.82■■■□□ 2.2
TSPAN9-208ENST00000640568 WDR43Q15061 677 aaKnown RBP eCLIP28.81■■■□□ 2.2
TSPAN9-208ENST00000640568 CCDC184Q52MB2 194 aa28.81■■■□□ 2.2
TSPAN9-208ENST00000640568 THRAP3Q9Y2W1 955 aaKnown RBP28.81■■■□□ 2.2
TSPAN9-208ENST00000640568 CCER2I3L3R5 266 aa28.8■■■□□ 2.2
TSPAN9-208ENST00000640568 U2AF1L5P0DN76 240 aaPredicted RBP28.8■■■□□ 2.2
TSPAN9-208ENST00000640568 GLI3P10071 1580 aa28.8■■■□□ 2.2
TSPAN9-208ENST00000640568 U2AF1Q01081 240 aaKnown RBP eCLIP28.8■■■□□ 2.2
TSPAN9-208ENST00000640568 RGS17Q9UGC6 210 aaPredicted RBP28.8■■■□□ 2.2
TSPAN9-208ENST00000640568 SULT6B1Q6IMI4 303 aa28.78■■■□□ 2.2
TSPAN9-208ENST00000640568 PARP4Q9UKK3 1724 aaKnown RBP28.78■■■□□ 2.2
TSPAN9-208ENST00000640568 HMOX1P09601 288 aa28.77■■■□□ 2.2
TSPAN9-208ENST00000640568 RBM6P78332 1123 aaKnown RBP28.77■■■□□ 2.2
TSPAN9-208ENST00000640568 NCAPD2Q15021 1401 aa28.76■■■□□ 2.2
TSPAN9-208ENST00000640568 RAPGEF4Q8WZA2 1011 aa28.76■■■□□ 2.19
TSPAN9-208ENST00000640568 A0A0G2JS52 829 aa28.74■■■□□ 2.19
TSPAN9-208ENST00000640568 RXRBP28702 533 aa28.74■■■□□ 2.19
TSPAN9-208ENST00000640568 MYT1Q01538 1121 aa28.74■■■□□ 2.19
TSPAN9-208ENST00000640568 FAM98CQ17RN3 349 aaKnown RBP28.74■■■□□ 2.19
TSPAN9-208ENST00000640568 IL2RBP14784 551 aa28.73■■■□□ 2.19
TSPAN9-208ENST00000640568 POTEAQ6S8J7 498 aa28.73■■■□□ 2.19
TSPAN9-208ENST00000640568 BARGINQ6ZT62 677 aa28.73■■■□□ 2.19
TSPAN9-208ENST00000640568 AEBP1Q8IUX7 1158 aa28.73■■■□□ 2.19
TSPAN9-208ENST00000640568 KDRP35968 1356 aa28.73■■■□□ 2.19
TSPAN9-208ENST00000640568 TATP17735 454 aaPredicted RBP28.72■■■□□ 2.19
TSPAN9-208ENST00000640568 CDCA7Q9BWT1 371 aaPredicted RBP28.72■■■□□ 2.19
TSPAN9-208ENST00000640568 MEGF6O75095 1541 aa28.7■■■□□ 2.18
TSPAN9-208ENST00000640568 PNNQ9H307 717 aaKnown RBP28.7■■■□□ 2.18
TSPAN9-208ENST00000640568 DISP2A7MBM2 1401 aa28.69■■■□□ 2.18
TSPAN9-208ENST00000640568 THSD7AQ9UPZ6 1657 aa28.68■■■□□ 2.18
TSPAN9-208ENST00000640568 FCHSD2O94868 740 aa28.68■■■□□ 2.18
TSPAN9-208ENST00000640568 NEFMP07197 916 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms