RNA–Protein interactions for RNA: ENST00000640476.1

CROCCP2-207, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-207ENST00000640476 LTV1Q96GA3 475 aaPredicted RBP27.17■■□□□ 1.94
CROCCP2-207ENST00000640476 RGPD2P0DJD1 1756 aa27.17■■□□□ 1.94
CROCCP2-207ENST00000640476 FAM83GA6ND36 823 aa27.17■■□□□ 1.94
CROCCP2-207ENST00000640476 PRDM11Q9NQV5 511 aa27.16■■□□□ 1.94
CROCCP2-207ENST00000640476 FLT4P35916 1363 aa27.16■■□□□ 1.94
CROCCP2-207ENST00000640476 FAM9BQ8IZU0 186 aa27.15■■□□□ 1.94
CROCCP2-207ENST00000640476 PNISRQ8TF01 805 aaKnown RBP27.15■■□□□ 1.94
CROCCP2-207ENST00000640476 IP6K1Q92551 441 aa27.15■■□□□ 1.94
CROCCP2-207ENST00000640476 LRP6O75581 1613 aa27.14■■□□□ 1.94
CROCCP2-207ENST00000640476 EIF4A2Q14240 407 aaKnown RBP27.14■■□□□ 1.93
CROCCP2-207ENST00000640476 CPDO75976 1380 aa27.14■■□□□ 1.93
CROCCP2-207ENST00000640476 SENP3-EIF4A1A0A087X0R7 540 aa27.13■■□□□ 1.93
CROCCP2-207ENST00000640476 CFAP53Q96M91 514 aa27.12■■□□□ 1.93
CROCCP2-207ENST00000640476 CAMTA1Q9Y6Y1 1673 aa27.11■■□□□ 1.93
CROCCP2-207ENST00000640476 DIAPH1O60610 1272 aaKnown RBP27.11■■□□□ 1.93
CROCCP2-207ENST00000640476 IL13P35225 146 aa27.11■■□□□ 1.93
CROCCP2-207ENST00000640476 LMO7Q8WWI1 1683 aa27.11■■□□□ 1.93
CROCCP2-207ENST00000640476 INSRP06213 1382 aa27.1■■□□□ 1.93
CROCCP2-207ENST00000640476 U2SURPO15042 1029 aaKnown RBP27.09■■□□□ 1.93
CROCCP2-207ENST00000640476 ADAMTS8Q9UP79 889 aa27.09■■□□□ 1.93
CROCCP2-207ENST00000640476 RTL1A6NKG5 1358 aa27.08■■□□□ 1.92
CROCCP2-207ENST00000640476 ANKRD24Q8TF21 1146 aa27.06■■□□□ 1.92
CROCCP2-207ENST00000640476 KIF24Q5T7B8 1368 aa27.06■■□□□ 1.92
CROCCP2-207ENST00000640476 USHBP1Q8N6Y0 703 aa27.05■■□□□ 1.92
CROCCP2-207ENST00000640476 BTG4Q9NY30 223 aa27.05■■□□□ 1.92
CROCCP2-207ENST00000640476 PLCH1Q4KWH8 1693 aa27.05■■□□□ 1.92
CROCCP2-207ENST00000640476 COL14A1Q05707 1796 aaKnown RBP27.04■■□□□ 1.92
CROCCP2-207ENST00000640476 SPATA31A6Q5VVP1 1343 aa27.04■■□□□ 1.92
CROCCP2-207ENST00000640476 HMOX1P09601 288 aa27.04■■□□□ 1.92
CROCCP2-207ENST00000640476 U2AF1L5P0DN76 240 aaPredicted RBP27.04■■□□□ 1.92
CROCCP2-207ENST00000640476 U2AF1Q01081 240 aaKnown RBP eCLIP27.04■■□□□ 1.92
CROCCP2-207ENST00000640476 AEBP1Q8IUX7 1158 aa27.04■■□□□ 1.92
CROCCP2-207ENST00000640476 C8orf37Q96NL8 207 aa27.04■■□□□ 1.92
CROCCP2-207ENST00000640476 RGPD1P0DJD0 1748 aa27.03■■□□□ 1.92
CROCCP2-207ENST00000640476 EYA1Q99502 592 aa27.03■■□□□ 1.92
CROCCP2-207ENST00000640476 STRN4Q9NRL3 753 aa27.03■■□□□ 1.92
CROCCP2-207ENST00000640476 ERBB3P21860 1342 aa27.03■■□□□ 1.92
CROCCP2-207ENST00000640476 WDR43Q15061 677 aaKnown RBP eCLIP27.02■■□□□ 1.924e-8■■■■□ 21.4
CROCCP2-207ENST00000640476 NBPF6Q5VWK0 638 aa27.02■■□□□ 1.92
CROCCP2-207ENST00000640476 NBPF4Q96M43 638 aa27.02■■□□□ 1.92
CROCCP2-207ENST00000640476 BLMP54132 1417 aaPredicted RBP27.02■■□□□ 1.92
CROCCP2-207ENST00000640476 COL5A2P05997 1499 aaPredicted RBP27.01■■□□□ 1.91
CROCCP2-207ENST00000640476 CCDC146Q8IYE0 955 aa27.01■■□□□ 1.91
CROCCP2-207ENST00000640476 LARP1Q6PKG0 1096 aaKnown RBP26.98■■□□□ 1.91
CROCCP2-207ENST00000640476 CSB-PGBD3P0DP91 1061 aa26.97■■□□□ 1.91
CROCCP2-207ENST00000640476 SULT6B1Q6IMI4 303 aa26.97■■□□□ 1.91
CROCCP2-207ENST00000640476 NGLY1Q96IV0 654 aa26.97■■□□□ 1.91
CROCCP2-207ENST00000640476 YTHDC1Q96MU7 727 aaKnown RBP26.97■■□□□ 1.91
CROCCP2-207ENST00000640476 NUDCQ9Y266 331 aa26.97■■□□□ 1.91
CROCCP2-207ENST00000640476 ABCC6O95255 1503 aa26.96■■□□□ 1.91
CROCCP2-207ENST00000640476 NRAPQ86VF7 1730 aa26.96■■□□□ 1.91
CROCCP2-207ENST00000640476 MEX3CQ5U5Q3 659 aaKnown RBP26.95■■□□□ 1.9
CROCCP2-207ENST00000640476 NLRP2Q9NX02 1062 aa26.95■■□□□ 1.9
CROCCP2-207ENST00000640476 EVA1CP58658 441 aa26.94■■□□□ 1.9
CROCCP2-207ENST00000640476 IGSF1Q8N6C5 1336 aa26.94■■□□□ 1.9
CROCCP2-207ENST00000640476 USP35Q9P2H5 1018 aa26.94■■□□□ 1.9
CROCCP2-207ENST00000640476 SLIT2O94813 1529 aa26.93■■□□□ 1.9
CROCCP2-207ENST00000640476 RSPH6AQ9H0K4 717 aa26.93■■□□□ 1.9
CROCCP2-207ENST00000640476 WDR17Q8IZU2 1322 aa26.92■■□□□ 1.9
CROCCP2-207ENST00000640476 TOM1L2Q6ZVM7 507 aa26.92■■□□□ 1.9
CROCCP2-207ENST00000640476 NWD2Q9ULI1 1742 aa26.91■■□□□ 1.9
CROCCP2-207ENST00000640476 FAM208AQ9UK61 1670 aaKnown RBP26.91■■□□□ 1.9
CROCCP2-207ENST00000640476 PRKAR2BP31323 418 aa26.91■■□□□ 1.9
CROCCP2-207ENST00000640476 BCL9LQ86UU0 1499 aa26.9■■□□□ 1.9
CROCCP2-207ENST00000640476 PHACTR3Q96KR7 559 aa26.9■■□□□ 1.9
CROCCP2-207ENST00000640476 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
CROCCP2-207ENST00000640476 PLEKHF1Q96S99 279 aa26.89■■□□□ 1.9
CROCCP2-207ENST00000640476 FNBP4Q8N3X1 1017 aaPredicted RBP26.87■■□□□ 1.89
CROCCP2-207ENST00000640476 SALL2Q9Y467 1007 aaPredicted RBP26.87■■□□□ 1.89
CROCCP2-207ENST00000640476 AFF2P51816 1311 aa26.87■■□□□ 1.89
CROCCP2-207ENST00000640476 KDRP35968 1356 aa26.86■■□□□ 1.89
CROCCP2-207ENST00000640476 FCHSD2O94868 740 aa26.86■■□□□ 1.89
CROCCP2-207ENST00000640476 USP21Q9UK80 565 aa26.85■■□□□ 1.89
CROCCP2-207ENST00000640476 RRP7AQ9Y3A4 280 aaKnown RBP26.85■■□□□ 1.89
CROCCP2-207ENST00000640476 UNC5CLQ8IV45 518 aa26.84■■□□□ 1.89
CROCCP2-207ENST00000640476 NCAPD2Q15021 1401 aa26.84■■□□□ 1.89
CROCCP2-207ENST00000640476 APAF1O14727 1248 aa26.84■■□□□ 1.89
CROCCP2-207ENST00000640476 CRB1P82279 1406 aa26.83■■□□□ 1.89
CROCCP2-207ENST00000640476 CARD10Q9BWT7 1032 aa26.82■■□□□ 1.88
CROCCP2-207ENST00000640476 MEGF6O75095 1541 aa26.81■■□□□ 1.88
CROCCP2-207ENST00000640476 HNRNPUQ00839 825 aaKnown RBP eCLIP26.81■■□□□ 1.88
CROCCP2-207ENST00000640476 NEUROD2Q15784 382 aa26.81■■□□□ 1.88
CROCCP2-207ENST00000640476 RUNDC1Q96C34 613 aa26.81■■□□□ 1.88
CROCCP2-207ENST00000640476 CCDC9Q9Y3X0 531 aaKnown RBP26.81■■□□□ 1.88
CROCCP2-207ENST00000640476 DLG5Q8TDM6 1919 aa26.81■■□□□ 1.88
CROCCP2-207ENST00000640476 TCP11L2Q8N4U5 519 aa26.8■■□□□ 1.88
CROCCP2-207ENST00000640476 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.78■■□□□ 1.88
CROCCP2-207ENST00000640476 SPATA31A1Q5TZJ5 1347 aa26.78■■□□□ 1.88
CROCCP2-207ENST00000640476 SPATA31A5Q5VU36 1347 aa26.76■■□□□ 1.87
CROCCP2-207ENST00000640476 SPATA31A7Q8IWB4 1347 aa26.76■■□□□ 1.87
CROCCP2-207ENST00000640476 MTHFSDQ2M296 383 aaKnown RBP26.76■■□□□ 1.87
CROCCP2-207ENST00000640476 MAPK8IP3Q9UPT6 1336 aa26.75■■□□□ 1.87
CROCCP2-207ENST00000640476 VPS72Q15906 364 aa26.74■■□□□ 1.87
CROCCP2-207ENST00000640476 RAPGEF4Q8WZA2 1011 aa26.74■■□□□ 1.87
CROCCP2-207ENST00000640476 WNK3Q9BYP7 1800 aa26.73■■□□□ 1.87
CROCCP2-207ENST00000640476 TMPOP42166 694 aaKnown RBP26.73■■□□□ 1.87
CROCCP2-207ENST00000640476 GLI3P10071 1580 aa26.71■■□□□ 1.87
CROCCP2-207ENST00000640476 EP400Q96L91 3159 aa26.71■■□□□ 1.87
CROCCP2-207ENST00000640476 FAM98CQ17RN3 349 aaKnown RBP26.71■■□□□ 1.87
CROCCP2-207ENST00000640476 SHANK3Q9BYB0 1731 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms