RNA–Protein interactions for RNA: ENST00000640154.1

CGREF1-209, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 5 BASIC

Gene CGREF1, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-209ENST00000640154 MYT1Q01538 1121 aa16.98■□□□□ 0.31
CGREF1-209ENST00000640154 BLMP54132 1417 aaPredicted RBP16.97■□□□□ 0.31
CGREF1-209ENST00000640154 CRB1P82279 1406 aa16.97■□□□□ 0.31
CGREF1-209ENST00000640154 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
CGREF1-209ENST00000640154 TCP11L2Q8N4U5 519 aa16.97■□□□□ 0.31
CGREF1-209ENST00000640154 AXIN2Q9Y2T1 843 aa16.97■□□□□ 0.31
CGREF1-209ENST00000640154 THRAP3Q9Y2W1 955 aaKnown RBP16.97■□□□□ 0.31
CGREF1-209ENST00000640154 LTN1O94822 1766 aa16.97■□□□□ 0.31
CGREF1-209ENST00000640154 SOX12O15370 315 aa16.96■□□□□ 0.31
CGREF1-209ENST00000640154 MYOM1P52179 1685 aa16.96■□□□□ 0.31
CGREF1-209ENST00000640154 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
CGREF1-209ENST00000640154 PARP4Q9UKK3 1724 aaKnown RBP16.95■□□□□ 0.3
CGREF1-209ENST00000640154 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
CGREF1-209ENST00000640154 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
CGREF1-209ENST00000640154 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
CGREF1-209ENST00000640154 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
CGREF1-209ENST00000640154 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
CGREF1-209ENST00000640154 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
CGREF1-209ENST00000640154 COG3Q96JB2 828 aa16.9■□□□□ 0.3
CGREF1-209ENST00000640154 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
CGREF1-209ENST00000640154 KIF20BQ96Q89 1820 aa16.9■□□□□ 0.3
CGREF1-209ENST00000640154 SRCAPQ6ZRS2 3230 aa16.89■□□□□ 0.29
CGREF1-209ENST00000640154 FYB1O15117 783 aa16.89■□□□□ 0.29
CGREF1-209ENST00000640154 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
CGREF1-209ENST00000640154 PDE3BQ13370 1112 aa16.88■□□□□ 0.29
CGREF1-209ENST00000640154 SF3B2Q13435 895 aaKnown RBP16.88■□□□□ 0.29
CGREF1-209ENST00000640154 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
CGREF1-209ENST00000640154 ERBB3P21860 1342 aa16.88■□□□□ 0.29
CGREF1-209ENST00000640154 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
CGREF1-209ENST00000640154 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
CGREF1-209ENST00000640154 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
CGREF1-209ENST00000640154 CARD14Q9BXL6 1004 aa16.87■□□□□ 0.29
CGREF1-209ENST00000640154 CCDC7Q96M83 1385 aa16.87■□□□□ 0.29
CGREF1-209ENST00000640154 DISP2A7MBM2 1401 aa16.87■□□□□ 0.29
CGREF1-209ENST00000640154 CSB-PGBD3P0DP91 1061 aa16.86■□□□□ 0.29
CGREF1-209ENST00000640154 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
CGREF1-209ENST00000640154 IP6K1Q92551 441 aa16.86■□□□□ 0.29
CGREF1-209ENST00000640154 PEAK1Q9H792 1746 aa16.85■□□□□ 0.29
CGREF1-209ENST00000640154 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
CGREF1-209ENST00000640154 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
CGREF1-209ENST00000640154 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
CGREF1-209ENST00000640154 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
CGREF1-209ENST00000640154 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
CGREF1-209ENST00000640154 C11orf95C9JLR9 678 aaPredicted RBP16.83■□□□□ 0.28
CGREF1-209ENST00000640154 BAG6P46379 1132 aa16.83■□□□□ 0.28
CGREF1-209ENST00000640154 DDB1Q16531 1140 aa16.83■□□□□ 0.28
CGREF1-209ENST00000640154 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
CGREF1-209ENST00000640154 RTL1A6NKG5 1358 aa16.82■□□□□ 0.28
CGREF1-209ENST00000640154 OVOS2A0A0G2JMS6 1433 aa16.81■□□□□ 0.28
CGREF1-209ENST00000640154 FBLN1P23142 703 aa16.81■□□□□ 0.28
CGREF1-209ENST00000640154 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
CGREF1-209ENST00000640154 TRIM37O94972 964 aa16.8■□□□□ 0.28
CGREF1-209ENST00000640154 HOXC9P31274 260 aa16.8■□□□□ 0.28
CGREF1-209ENST00000640154 BCL9O00512 1426 aa16.79■□□□□ 0.28
CGREF1-209ENST00000640154 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
CGREF1-209ENST00000640154 AMPHP49418 695 aa16.79■□□□□ 0.28
CGREF1-209ENST00000640154 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
CGREF1-209ENST00000640154 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
CGREF1-209ENST00000640154 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
CGREF1-209ENST00000640154 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
CGREF1-209ENST00000640154 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
CGREF1-209ENST00000640154 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
CGREF1-209ENST00000640154 ANKRD26Q9UPS8 1709 aa16.78■□□□□ 0.28
CGREF1-209ENST00000640154 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.28
CGREF1-209ENST00000640154 EXOC5O00471 708 aa16.77■□□□□ 0.28
CGREF1-209ENST00000640154 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
CGREF1-209ENST00000640154 KAT6BQ8WYB5 2073 aa16.76■□□□□ 0.27
CGREF1-209ENST00000640154 IL2RBP14784 551 aa16.76■□□□□ 0.27
CGREF1-209ENST00000640154 CAMKK2Q96RR4 588 aa16.76■□□□□ 0.27
CGREF1-209ENST00000640154 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
CGREF1-209ENST00000640154 APBA3O96018 575 aa16.75■□□□□ 0.27
CGREF1-209ENST00000640154 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
CGREF1-209ENST00000640154 INSRP06213 1382 aa16.75■□□□□ 0.27
CGREF1-209ENST00000640154 FLT4P35916 1363 aa16.75■□□□□ 0.27
CGREF1-209ENST00000640154 PANK3Q9H999 370 aa16.74■□□□□ 0.27
CGREF1-209ENST00000640154 RREB1Q92766 1687 aa16.74■□□□□ 0.27
CGREF1-209ENST00000640154 RGPD3A6NKT7 1758 aaPredicted RBP16.74■□□□□ 0.27
CGREF1-209ENST00000640154 RGPD4Q7Z3J3 1758 aa16.74■□□□□ 0.27
CGREF1-209ENST00000640154 EZH2Q15910 746 aaKnown RBP16.72■□□□□ 0.27
CGREF1-209ENST00000640154 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
CGREF1-209ENST00000640154 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
CGREF1-209ENST00000640154 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
CGREF1-209ENST00000640154 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.27
CGREF1-209ENST00000640154 EMILIN1Q9Y6C2 1016 aa16.71■□□□□ 0.27
CGREF1-209ENST00000640154 NSD2O96028 1365 aa16.71■□□□□ 0.27
CGREF1-209ENST00000640154 NUP188Q5SRE5 1749 aa16.7■□□□□ 0.26
CGREF1-209ENST00000640154 NHSQ6T4R5 1651 aa16.69■□□□□ 0.26
CGREF1-209ENST00000640154 NBPF6Q5VWK0 638 aa16.69■□□□□ 0.26
CGREF1-209ENST00000640154 NBPF4Q96M43 638 aa16.69■□□□□ 0.26
CGREF1-209ENST00000640154 SHANK3Q9BYB0 1731 aa16.68■□□□□ 0.26
CGREF1-209ENST00000640154 PLSCR1O15162 318 aa16.68■□□□□ 0.26
CGREF1-209ENST00000640154 PTF1AQ7RTS3 328 aa16.68■□□□□ 0.26
CGREF1-209ENST00000640154 POLKQ9UBT6 870 aa16.68■□□□□ 0.26
CGREF1-209ENST00000640154 MEGF6O75095 1541 aa16.68■□□□□ 0.26
CGREF1-209ENST00000640154 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
CGREF1-209ENST00000640154 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
CGREF1-209ENST00000640154 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
CGREF1-209ENST00000640154 BTAF1O14981 1849 aa16.64■□□□□ 0.25
CGREF1-209ENST00000640154 PPM1GO15355 546 aaPredicted RBP16.64■□□□□ 0.25
CGREF1-209ENST00000640154 KCNQ2O43526 872 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms