RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
NECAP1-223ENST00000640091 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
NECAP1-223ENST00000640091 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
NECAP1-223ENST00000640091 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
NECAP1-223ENST00000640091 MAPK8IP3Q9UPT6 1336 aa13.78□□□□□ -0.2
NECAP1-223ENST00000640091 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
NECAP1-223ENST00000640091 PXDNQ92626 1479 aa13.78□□□□□ -0.2
NECAP1-223ENST00000640091 USP19O94966 1318 aa13.77□□□□□ -0.21
NECAP1-223ENST00000640091 SOS2Q07890 1332 aaPredicted RBP13.77□□□□□ -0.21
NECAP1-223ENST00000640091 GOLGA2Q08379 1002 aa13.77□□□□□ -0.21
NECAP1-223ENST00000640091 ARHGEF25Q86VW2 580 aa13.77□□□□□ -0.21
NECAP1-223ENST00000640091 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
NECAP1-223ENST00000640091 TMPOP42166 694 aaKnown RBP13.76□□□□□ -0.21
NECAP1-223ENST00000640091 IP6K1Q92551 441 aa13.76□□□□□ -0.21
NECAP1-223ENST00000640091 EYA1Q99502 592 aa13.76□□□□□ -0.21
NECAP1-223ENST00000640091 TNS3Q68CZ2 1445 aa13.75□□□□□ -0.21
NECAP1-223ENST00000640091 NEFMP07197 916 aa13.75□□□□□ -0.21
NECAP1-223ENST00000640091 RIPK4P57078 832 aa13.75□□□□□ -0.21
NECAP1-223ENST00000640091 AXIN2Q9Y2T1 843 aa13.75□□□□□ -0.21
NECAP1-223ENST00000640091 NFAT5O94916 1531 aa13.75□□□□□ -0.21
NECAP1-223ENST00000640091 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
NECAP1-223ENST00000640091 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
NECAP1-223ENST00000640091 KIF24Q5T7B8 1368 aa13.74□□□□□ -0.21
NECAP1-223ENST00000640091 IQSEC2Q5JU85 1478 aa13.73□□□□□ -0.21
NECAP1-223ENST00000640091 ALS2Q96Q42 1657 aa13.73□□□□□ -0.21
NECAP1-223ENST00000640091 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
NECAP1-223ENST00000640091 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
NECAP1-223ENST00000640091 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
NECAP1-223ENST00000640091 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
NECAP1-223ENST00000640091 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
NECAP1-223ENST00000640091 SLIT3O75094 1523 aa13.72□□□□□ -0.21
NECAP1-223ENST00000640091 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
NECAP1-223ENST00000640091 DUSP27Q5VZP5 1158 aa13.72□□□□□ -0.21
NECAP1-223ENST00000640091 ARHGEF10O15013 1369 aa13.72□□□□□ -0.21
NECAP1-223ENST00000640091 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
NECAP1-223ENST00000640091 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
NECAP1-223ENST00000640091 LRRC59Q96AG4 307 aaKnown RBP13.72□□□□□ -0.21
NECAP1-223ENST00000640091 NBPF6Q5VWK0 638 aa13.71□□□□□ -0.21
NECAP1-223ENST00000640091 NBPF4Q96M43 638 aa13.71□□□□□ -0.21
NECAP1-223ENST00000640091 RTL1A6NKG5 1358 aa13.71□□□□□ -0.21
NECAP1-223ENST00000640091 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.22
NECAP1-223ENST00000640091 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
NECAP1-223ENST00000640091 LTN1O94822 1766 aa13.7□□□□□ -0.22
NECAP1-223ENST00000640091 HAP1P54257 671 aaPredicted RBP13.7□□□□□ -0.22
NECAP1-223ENST00000640091 IRX6P78412 446 aaPredicted RBP13.7□□□□□ -0.22
NECAP1-223ENST00000640091 TRMT2AQ8IZ69 625 aaKnown RBP13.7□□□□□ -0.22
NECAP1-223ENST00000640091 E9PSI1 815 aa13.69□□□□□ -0.22
NECAP1-223ENST00000640091 TOM1O60784 492 aa13.69□□□□□ -0.22
NECAP1-223ENST00000640091 FKBP8Q14318 412 aa13.69□□□□□ -0.22
NECAP1-223ENST00000640091 WDR63Q8IWG1 891 aa13.69□□□□□ -0.22
NECAP1-223ENST00000640091 ANKRD24Q8TF21 1146 aa13.69□□□□□ -0.22
NECAP1-223ENST00000640091 THUMPD2Q9BTF0 503 aaKnown RBP13.69□□□□□ -0.22
NECAP1-223ENST00000640091 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
NECAP1-223ENST00000640091 FAM83GA6ND36 823 aa13.68□□□□□ -0.22
NECAP1-223ENST00000640091 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
NECAP1-223ENST00000640091 UBAP1LF5GYI3 381 aa13.67□□□□□ -0.22
NECAP1-223ENST00000640091 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
NECAP1-223ENST00000640091 KDRP35968 1356 aa13.67□□□□□ -0.22
NECAP1-223ENST00000640091 ROBO1Q9Y6N7 1651 aa13.67□□□□□ -0.22
NECAP1-223ENST00000640091 DCTN1Q14203 1278 aa13.67□□□□□ -0.22
NECAP1-223ENST00000640091 MTHFSDQ2M296 383 aaKnown RBP13.67□□□□□ -0.22
NECAP1-223ENST00000640091 RGPD1P0DJD0 1748 aa13.66□□□□□ -0.22
NECAP1-223ENST00000640091 NEFLP07196 543 aa13.66□□□□□ -0.22
NECAP1-223ENST00000640091 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
NECAP1-223ENST00000640091 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
NECAP1-223ENST00000640091 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
NECAP1-223ENST00000640091 ERBB3P21860 1342 aa13.65□□□□□ -0.22
NECAP1-223ENST00000640091 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
NECAP1-223ENST00000640091 CSB-PGBD3P0DP91 1061 aa13.64□□□□□ -0.23
NECAP1-223ENST00000640091 MCM10Q7L590 875 aa13.64□□□□□ -0.23
NECAP1-223ENST00000640091 NLRP2Q9NX02 1062 aa13.64□□□□□ -0.23
NECAP1-223ENST00000640091 PHRF1Q9P1Y6 1649 aaKnown RBP13.63□□□□□ -0.23
NECAP1-223ENST00000640091 MYH16Q9H6N6 1097 aa13.63□□□□□ -0.23
NECAP1-223ENST00000640091 CPDO75976 1380 aa13.63□□□□□ -0.23
NECAP1-223ENST00000640091 CERKQ8TCT0 537 aa13.61□□□□□ -0.23
NECAP1-223ENST00000640091 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
NECAP1-223ENST00000640091 PLIN1O60240 522 aa13.61□□□□□ -0.23
NECAP1-223ENST00000640091 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
NECAP1-223ENST00000640091 RGPD5Q99666 1765 aa13.61□□□□□ -0.23
NECAP1-223ENST00000640091 GAS2L2Q8NHY3 880 aa13.6□□□□□ -0.23
NECAP1-223ENST00000640091 CRYBG1Q9Y4K1 1723 aa13.6□□□□□ -0.23
NECAP1-223ENST00000640091 RGPD2P0DJD1 1756 aa13.6□□□□□ -0.23
NECAP1-223ENST00000640091 IL16Q14005 1332 aa13.6□□□□□ -0.23
NECAP1-223ENST00000640091 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
NECAP1-223ENST00000640091 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
NECAP1-223ENST00000640091 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
NECAP1-223ENST00000640091 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
NECAP1-223ENST00000640091 STRN4Q9NRL3 753 aa13.59□□□□□ -0.23
NECAP1-223ENST00000640091 COL18A1P39060 1754 aa13.58□□□□□ -0.23
NECAP1-223ENST00000640091 BCAR3O75815 825 aa13.58□□□□□ -0.23
NECAP1-223ENST00000640091 RRP1P56182 461 aaKnown RBP13.58□□□□□ -0.23
NECAP1-223ENST00000640091 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.24
NECAP1-223ENST00000640091 EVA1CP58658 441 aa13.58□□□□□ -0.24
NECAP1-223ENST00000640091 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
NECAP1-223ENST00000640091 TOM1L2Q6ZVM7 507 aa13.58□□□□□ -0.24
NECAP1-223ENST00000640091 CAMTA1Q9Y6Y1 1673 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
NECAP1-223ENST00000640091 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
NECAP1-223ENST00000640091 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
NECAP1-223ENST00000640091 GNAI1P63096 354 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms