RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SNRPBP14678 240 aaKnown RBP10.93□□□□□ -0.66
CCDC7-216ENST00000640058 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
CCDC7-216ENST00000640058 ZBBXA8MT70 800 aa10.92□□□□□ -0.66
CCDC7-216ENST00000640058 FBXO45P0C2W1 286 aa10.92□□□□□ -0.66
CCDC7-216ENST00000640058 SENP2Q9HC62 589 aa10.92□□□□□ -0.66
CCDC7-216ENST00000640058 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
CCDC7-216ENST00000640058 INTS6LQ5JSJ4 861 aaKnown RBP10.91□□□□□ -0.66
CCDC7-216ENST00000640058 ZNF775Q96BV0 537 aaPredicted RBP10.91□□□□□ -0.66
CCDC7-216ENST00000640058 TRIM47Q96LD4 638 aa10.91□□□□□ -0.66
CCDC7-216ENST00000640058 CDV3Q9UKY7 258 aaKnown RBP10.91□□□□□ -0.66
CCDC7-216ENST00000640058 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
CCDC7-216ENST00000640058 GPR37L1O60883 481 aa10.9□□□□□ -0.66
CCDC7-216ENST00000640058 PPP1R26Q5T8A7 1209 aaPredicted RBP10.9□□□□□ -0.66
CCDC7-216ENST00000640058 MRPL14Q6P1L8 145 aaKnown RBP10.9□□□□□ -0.66
CCDC7-216ENST00000640058 PURBQ96QR8 312 aaKnown RBP10.9□□□□□ -0.66
CCDC7-216ENST00000640058 APBB1O00213 710 aa10.89□□□□□ -0.67
CCDC7-216ENST00000640058 ZFP42Q96MM3 310 aa10.89□□□□□ -0.67
CCDC7-216ENST00000640058 TBC1D2BQ9UPU7 963 aa10.89□□□□□ -0.67
CCDC7-216ENST00000640058 EMILIN1Q9Y6C2 1016 aa10.89□□□□□ -0.67
CCDC7-216ENST00000640058 NBPF20Q3BBV1 942 aa10.88□□□□□ -0.67
CCDC7-216ENST00000640058 C6orf118Q5T5N4 469 aa10.88□□□□□ -0.67
CCDC7-216ENST00000640058 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
CCDC7-216ENST00000640058 SOCS7O14512 581 aa10.87□□□□□ -0.67
CCDC7-216ENST00000640058 NR1H3Q13133 447 aa10.86□□□□□ -0.67
CCDC7-216ENST00000640058 CBLBQ13191 982 aa10.86□□□□□ -0.67
CCDC7-216ENST00000640058 SCARF1Q14162 830 aa10.86□□□□□ -0.67
CCDC7-216ENST00000640058 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
CCDC7-216ENST00000640058 MEIOBQ8N635 442 aa10.85□□□□□ -0.67
CCDC7-216ENST00000640058 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
CCDC7-216ENST00000640058 DHX9Q08211 1270 aaKnown RBP10.84□□□□□ -0.67
CCDC7-216ENST00000640058 BMP2P12643 396 aa10.83□□□□□ -0.68
CCDC7-216ENST00000640058 LINC00528Q8N1L1 170 aa10.83□□□□□ -0.68
CCDC7-216ENST00000640058 SOBPA7XYQ1 873 aa10.82□□□□□ -0.68
CCDC7-216ENST00000640058 GIGYF1O75420 1035 aaPredicted RBP10.82□□□□□ -0.68
CCDC7-216ENST00000640058 UPP2O95045 317 aa10.82□□□□□ -0.68
CCDC7-216ENST00000640058 MCM6Q14566 821 aa10.82□□□□□ -0.68
CCDC7-216ENST00000640058 GDPD2Q9HCC8 539 aa10.82□□□□□ -0.68
CCDC7-216ENST00000640058 ESPNB1AK53 854 aa10.81□□□□□ -0.68
CCDC7-216ENST00000640058 ERVH48-1M5A8F1 160 aa10.81□□□□□ -0.68
CCDC7-216ENST00000640058 PRM3Q9NNZ6 103 aa10.81□□□□□ -0.68
CCDC7-216ENST00000640058 ABL2P42684 1182 aa10.8□□□□□ -0.68
CCDC7-216ENST00000640058 ZNF784Q8NCA9 323 aaPredicted RBP10.8□□□□□ -0.68
CCDC7-216ENST00000640058 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
CCDC7-216ENST00000640058 ZNF330Q9Y3S2 320 aaPredicted RBP10.79□□□□□ -0.68
CCDC7-216ENST00000640058 IRF5Q13568 498 aa10.78□□□□□ -0.68
CCDC7-216ENST00000640058 TSEN34Q9BSV6 310 aaKnown RBP10.78□□□□□ -0.68
CCDC7-216ENST00000640058 CYLDQ9NQC7 956 aa10.78□□□□□ -0.68
CCDC7-216ENST00000640058 RELBQ01201 579 aa10.77□□□□□ -0.69
CCDC7-216ENST00000640058 Q6ZVU0 165 aa10.77□□□□□ -0.69
CCDC7-216ENST00000640058 VAC14Q08AM6 782 aa10.76□□□□□ -0.69
CCDC7-216ENST00000640058 TMEM132AQ24JP5 1023 aa10.75□□□□□ -0.69
CCDC7-216ENST00000640058 SEPT12Q8IYM1 358 aa10.75□□□□□ -0.69
CCDC7-216ENST00000640058 MAN1A2O60476 641 aa10.74□□□□□ -0.69
CCDC7-216ENST00000640058 LILRA1O75019 489 aa10.74□□□□□ -0.69
CCDC7-216ENST00000640058 ADD1P35611 737 aaKnown RBP10.74□□□□□ -0.69
CCDC7-216ENST00000640058 VEGFBP49765 207 aa10.73□□□□□ -0.69
CCDC7-216ENST00000640058 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
CCDC7-216ENST00000640058 TERTO14746 1132 aaKnown RBP10.72□□□□□ -0.69
CCDC7-216ENST00000640058 MCCD1P59942 119 aaPredicted RBP10.72□□□□□ -0.69
CCDC7-216ENST00000640058 TREML4Q6UXN2 200 aa10.72□□□□□ -0.69
CCDC7-216ENST00000640058 POM121Q96HA1 1249 aa10.72□□□□□ -0.69
CCDC7-216ENST00000640058 COG6Q9Y2V7 657 aa10.72□□□□□ -0.69
CCDC7-216ENST00000640058 FIGNL2A6NMB9 653 aa10.71□□□□□ -0.69
CCDC7-216ENST00000640058 WFS1O76024 890 aa10.71□□□□□ -0.69
CCDC7-216ENST00000640058 ADH1AP07327 375 aa10.71□□□□□ -0.69
CCDC7-216ENST00000640058 SOS2Q07890 1332 aaPredicted RBP10.71□□□□□ -0.69
CCDC7-216ENST00000640058 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
CCDC7-216ENST00000640058 ZNF592Q92610 1267 aa10.71□□□□□ -0.69
CCDC7-216ENST00000640058 DNMT3LQ9UJW3 386 aa10.71□□□□□ -0.69
CCDC7-216ENST00000640058 PCDHB11Q9Y5F2 797 aa10.71□□□□□ -0.69
CCDC7-216ENST00000640058 SPINT1O43278 529 aa10.7□□□□□ -0.7
CCDC7-216ENST00000640058 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCDC7-216ENST00000640058 NFX1Q12986 1120 aaKnown RBP10.7□□□□□ -0.7
CCDC7-216ENST00000640058 INSM2Q96T92 566 aaPredicted RBP10.7□□□□□ -0.7
CCDC7-216ENST00000640058 TTLL8A6PVC2 850 aa10.69□□□□□ -0.7
CCDC7-216ENST00000640058 POLMQ9NP87 494 aaPredicted RBP10.69□□□□□ -0.7
CCDC7-216ENST00000640058 CEP126Q9P2H0 1117 aa10.69□□□□□ -0.7
CCDC7-216ENST00000640058 NXF1Q9UBU9 619 aaKnown RBP10.69□□□□□ -0.7
CCDC7-216ENST00000640058 CTSOP43234 321 aaPredicted RBP10.68□□□□□ -0.7
CCDC7-216ENST00000640058 SCTRP47872 440 aa10.68□□□□□ -0.7
CCDC7-216ENST00000640058 CC2D2BQ6DHV5 1058 aa10.67□□□□□ -0.7
CCDC7-216ENST00000640058 KDF1Q8NAX2 398 aaPredicted RBP10.67□□□□□ -0.7
CCDC7-216ENST00000640058 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
CCDC7-216ENST00000640058 PTGIRP43119 386 aa10.66□□□□□ -0.7
CCDC7-216ENST00000640058 FLIIQ13045 1269 aa10.66□□□□□ -0.7
CCDC7-216ENST00000640058 WASHC4Q2M389 1173 aa10.66□□□□□ -0.7
CCDC7-216ENST00000640058 CCDC85AQ96PX6 553 aaPredicted RBP10.66□□□□□ -0.7
CCDC7-216ENST00000640058 ERVK-9P63128 1117 aa10.65□□□□□ -0.7
CCDC7-216ENST00000640058 LCE2AQ5TA79 106 aaPredicted RBP10.65□□□□□ -0.7
CCDC7-216ENST00000640058 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
CCDC7-216ENST00000640058 CDCA7Q9BWT1 371 aaPredicted RBP10.65□□□□□ -0.7
CCDC7-216ENST00000640058 ATP5J2-PTCD1G3V325 749 aa10.64□□□□□ -0.71
CCDC7-216ENST00000640058 RAD21O60216 631 aa10.64□□□□□ -0.71
CCDC7-216ENST00000640058 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.63□□□□□ -0.71
CCDC7-216ENST00000640058 TSGA10IPQ3SY00 556 aa10.63□□□□□ -0.71
CCDC7-216ENST00000640058 SLFNL1Q499Z3 407 aa10.63□□□□□ -0.71
CCDC7-216ENST00000640058 CCDC125Q86Z20 511 aa10.63□□□□□ -0.71
CCDC7-216ENST00000640058 SLC16A10Q8TF71 515 aa10.63□□□□□ -0.71
CCDC7-216ENST00000640058 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
CCDC7-216ENST00000640058 ESF1Q9H501 851 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms