RNA–Protein interactions for RNA: ENST00000639738.1

SCARB2-219, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 1,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-219ENST00000639738 HOXC9P31274 260 aa27.88■■■□□ 2.05
SCARB2-219ENST00000639738 CPDO75976 1380 aa27.88■■■□□ 2.05
SCARB2-219ENST00000639738 DIAPH1O60610 1272 aaKnown RBP27.87■■■□□ 2.05
SCARB2-219ENST00000639738 PLEKHG5O94827 1062 aa27.87■■■□□ 2.05
SCARB2-219ENST00000639738 IP6K1Q92551 441 aa27.87■■■□□ 2.05
SCARB2-219ENST00000639738 RGPD1P0DJD0 1748 aa27.86■■■□□ 2.05
SCARB2-219ENST00000639738 AMPHP49418 695 aa27.85■■■□□ 2.05
SCARB2-219ENST00000639738 RGPD5Q99666 1765 aa27.85■■■□□ 2.05
SCARB2-219ENST00000639738 ZC3H6P61129 1189 aaKnown RBP27.84■■■□□ 2.05
SCARB2-219ENST00000639738 EIF4A2Q14240 407 aaKnown RBP27.84■■■□□ 2.05
SCARB2-219ENST00000639738 BLMP54132 1417 aaPredicted RBP27.84■■■□□ 2.05
SCARB2-219ENST00000639738 ABCC6O95255 1503 aa27.83■■■□□ 2.05
SCARB2-219ENST00000639738 KIAA0232Q92628 1395 aa27.82■■■□□ 2.04
SCARB2-219ENST00000639738 WDR43Q15061 677 aaKnown RBP eCLIP27.82■■■□□ 2.04
SCARB2-219ENST00000639738 AXIN2Q9Y2T1 843 aa27.81■■■□□ 2.04
SCARB2-219ENST00000639738 LMO7Q8WWI1 1683 aa27.8■■■□□ 2.04
SCARB2-219ENST00000639738 LRP6O75581 1613 aa27.79■■■□□ 2.04
SCARB2-219ENST00000639738 NUDCQ9Y266 331 aa27.78■■■□□ 2.04
SCARB2-219ENST00000639738 SPATA31A6Q5VVP1 1343 aa27.78■■■□□ 2.04
SCARB2-219ENST00000639738 RGPD2P0DJD1 1756 aa27.75■■■□□ 2.03
SCARB2-219ENST00000639738 U2AF1L5P0DN76 240 aaPredicted RBP27.75■■■□□ 2.03
SCARB2-219ENST00000639738 U2AF1Q01081 240 aaKnown RBP eCLIP27.75■■■□□ 2.03
SCARB2-219ENST00000639738 U2SURPO15042 1029 aaKnown RBP27.74■■■□□ 2.03
SCARB2-219ENST00000639738 POTEAQ6S8J7 498 aa27.74■■■□□ 2.03
SCARB2-219ENST00000639738 YTHDC1Q96MU7 727 aaKnown RBP27.74■■■□□ 2.03
SCARB2-219ENST00000639738 CAMTA1Q9Y6Y1 1673 aa27.73■■■□□ 2.03
SCARB2-219ENST00000639738 ZBTB7CA1YPR0 619 aa27.73■■■□□ 2.03
SCARB2-219ENST00000639738 CHRNA2Q15822 529 aa27.73■■■□□ 2.03
SCARB2-219ENST00000639738 PLEKHF1Q96S99 279 aa27.72■■■□□ 2.03
SCARB2-219ENST00000639738 IGSF1Q8N6C5 1336 aa27.72■■■□□ 2.03
SCARB2-219ENST00000639738 EYA1Q99502 592 aa27.72■■■□□ 2.03
SCARB2-219ENST00000639738 FAM83GA6ND36 823 aa27.71■■■□□ 2.03
SCARB2-219ENST00000639738 RSPH6AQ9H0K4 717 aa27.71■■■□□ 2.03
SCARB2-219ENST00000639738 NCAPD2Q15021 1401 aa27.7■■■□□ 2.02
SCARB2-219ENST00000639738 COL14A1Q05707 1796 aaKnown RBP27.7■■■□□ 2.02
SCARB2-219ENST00000639738 KDRP35968 1356 aa27.69■■■□□ 2.02
SCARB2-219ENST00000639738 FCHSD2O94868 740 aa27.69■■■□□ 2.02
SCARB2-219ENST00000639738 PRDM11Q9NQV5 511 aa27.69■■■□□ 2.02
SCARB2-219ENST00000639738 ERBB3P21860 1342 aa27.68■■■□□ 2.02
SCARB2-219ENST00000639738 HAP1P54257 671 aaPredicted RBP27.68■■■□□ 2.02
SCARB2-219ENST00000639738 CCDC146Q8IYE0 955 aa27.68■■■□□ 2.02
SCARB2-219ENST00000639738 ANKRD24Q8TF21 1146 aa27.68■■■□□ 2.02
SCARB2-219ENST00000639738 LTV1Q96GA3 475 aaPredicted RBP27.67■■■□□ 2.02
SCARB2-219ENST00000639738 NBPF6Q5VWK0 638 aa27.67■■■□□ 2.02
SCARB2-219ENST00000639738 AEBP1Q8IUX7 1158 aa27.67■■■□□ 2.02
SCARB2-219ENST00000639738 NBPF4Q96M43 638 aa27.67■■■□□ 2.02
SCARB2-219ENST00000639738 FAM208AQ9UK61 1670 aaKnown RBP27.66■■■□□ 2.02
SCARB2-219ENST00000639738 HMOX1P09601 288 aa27.66■■■□□ 2.02
SCARB2-219ENST00000639738 HNRNPUQ00839 825 aaKnown RBP eCLIP27.66■■■□□ 2.02
SCARB2-219ENST00000639738 MEX3CQ5U5Q3 659 aaKnown RBP27.66■■■□□ 2.02
SCARB2-219ENST00000639738 RUNDC1Q96C34 613 aa27.66■■■□□ 2.02
SCARB2-219ENST00000639738 COL5A2P05997 1499 aaPredicted RBP27.64■■■□□ 2.02
SCARB2-219ENST00000639738 SULT6B1Q6IMI4 303 aa27.64■■■□□ 2.02
SCARB2-219ENST00000639738 PRKAR2BP31323 418 aa27.62■■■□□ 2.01
SCARB2-219ENST00000639738 PLCH1Q4KWH8 1693 aa27.61■■■□□ 2.01
SCARB2-219ENST00000639738 APAF1O14727 1248 aa27.61■■■□□ 2.01
SCARB2-219ENST00000639738 SENP3-EIF4A1A0A087X0R7 540 aa27.6■■■□□ 2.01
SCARB2-219ENST00000639738 PHACTR3Q96KR7 559 aa27.6■■■□□ 2.01
SCARB2-219ENST00000639738 NUTM2BA6NNL0 878 aaPredicted RBP27.59■■■□□ 2.01
SCARB2-219ENST00000639738 NUTM2EB1AL46 878 aaPredicted RBP27.59■■■□□ 2.01
SCARB2-219ENST00000639738 NUTM2AQ8IVF1 878 aaPredicted RBP27.59■■■□□ 2.01
SCARB2-219ENST00000639738 NRAPQ86VF7 1730 aa27.59■■■□□ 2.01
SCARB2-219ENST00000639738 TCP11L2Q8N4U5 519 aa27.58■■■□□ 2.01
SCARB2-219ENST00000639738 PNNQ9H307 717 aaKnown RBP27.58■■■□□ 2.01
SCARB2-219ENST00000639738 ADAMTS2O95450 1211 aa27.57■■■□□ 2
SCARB2-219ENST00000639738 USHBP1Q8N6Y0 703 aa27.57■■■□□ 2
SCARB2-219ENST00000639738 ZBED9Q6R2W3 1325 aa27.57■■■□□ 2
SCARB2-219ENST00000639738 WDR17Q8IZU2 1322 aa27.57■■■□□ 2
SCARB2-219ENST00000639738 NWD2Q9ULI1 1742 aa27.56■■■□□ 2
SCARB2-219ENST00000639738 ZNF772Q68DY9 489 aaPredicted RBP27.56■■■□□ 2
SCARB2-219ENST00000639738 BTG4Q9NY30 223 aa27.56■■■□□ 2
SCARB2-219ENST00000639738 SLIT2O94813 1529 aa27.55■■■□□ 2
SCARB2-219ENST00000639738 NCBP3Q53F19 620 aaKnown RBP27.55■■■□□ 2
SCARB2-219ENST00000639738 ZNF521Q96K83 1311 aa27.53■■■□□ 2
SCARB2-219ENST00000639738 DLG5Q8TDM6 1919 aa27.53■■■□□ 2
SCARB2-219ENST00000639738 TMPOP42166 694 aaKnown RBP27.52■■■□□ 2
SCARB2-219ENST00000639738 LARP1Q6PKG0 1096 aaKnown RBP27.51■■□□□ 1.99
SCARB2-219ENST00000639738 NGEFQ8N5V2 710 aa27.51■■□□□ 1.99
SCARB2-219ENST00000639738 NLRP2Q9NX02 1062 aa27.51■■□□□ 1.99
SCARB2-219ENST00000639738 MAPK8IP3Q9UPT6 1336 aa27.49■■□□□ 1.99
SCARB2-219ENST00000639738 CSB-PGBD3P0DP91 1061 aa27.49■■□□□ 1.99
SCARB2-219ENST00000639738 RRP7AQ9Y3A4 280 aaKnown RBP27.49■■□□□ 1.99
SCARB2-219ENST00000639738 AFF2P51816 1311 aa27.48■■□□□ 1.99
SCARB2-219ENST00000639738 CARD10Q9BWT7 1032 aa27.48■■□□□ 1.99
SCARB2-219ENST00000639738 SALL2Q9Y467 1007 aaPredicted RBP27.48■■□□□ 1.99
SCARB2-219ENST00000639738 NFE2L2Q16236 605 aa27.47■■□□□ 1.99
SCARB2-219ENST00000639738 CCDC27Q2M243 656 aa27.47■■□□□ 1.99
SCARB2-219ENST00000639738 CRB1P82279 1406 aa27.47■■□□□ 1.99
SCARB2-219ENST00000639738 STRN4Q9NRL3 753 aa27.46■■□□□ 1.99
SCARB2-219ENST00000639738 TRIM35Q9UPQ4 493 aa27.46■■□□□ 1.99
SCARB2-219ENST00000639738 EVA1CP58658 441 aa27.46■■□□□ 1.99
SCARB2-219ENST00000639738 FNBP4Q8N3X1 1017 aaPredicted RBP27.46■■□□□ 1.99
SCARB2-219ENST00000639738 BCL9LQ86UU0 1499 aa27.46■■□□□ 1.99
SCARB2-219ENST00000639738 MEGF6O75095 1541 aa27.45■■□□□ 1.98
SCARB2-219ENST00000639738 MTHFSDQ2M296 383 aaKnown RBP27.45■■□□□ 1.98
SCARB2-219ENST00000639738 TOM1L2Q6ZVM7 507 aa27.45■■□□□ 1.98
SCARB2-219ENST00000639738 WWC1Q8IX03 1113 aa27.44■■□□□ 1.98
SCARB2-219ENST00000639738 C8orf37Q96NL8 207 aa27.44■■□□□ 1.98
SCARB2-219ENST00000639738 PLEKHG2Q9H7P9 1386 aa27.44■■□□□ 1.98
SCARB2-219ENST00000639738 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms