RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 SMG6Q86US8 1419 aaKnown RBP19.53■□□□□ 0.72
CNTNAP2-225ENST00000639247 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
CNTNAP2-225ENST00000639247 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.72
CNTNAP2-225ENST00000639247 LRP6O75581 1613 aa19.52■□□□□ 0.71
CNTNAP2-225ENST00000639247 IP6K1Q92551 441 aa19.52■□□□□ 0.71
CNTNAP2-225ENST00000639247 FLT4P35916 1363 aa19.51■□□□□ 0.71
CNTNAP2-225ENST00000639247 EIF4A2Q14240 407 aaKnown RBP19.51■□□□□ 0.71
CNTNAP2-225ENST00000639247 CDK12Q9NYV4 1490 aaPredicted RBP19.51■□□□□ 0.71
CNTNAP2-225ENST00000639247 COL18A1P39060 1754 aa19.5■□□□□ 0.71
CNTNAP2-225ENST00000639247 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
CNTNAP2-225ENST00000639247 CPDO75976 1380 aa19.5■□□□□ 0.71
CNTNAP2-225ENST00000639247 CAMTA1Q9Y6Y1 1673 aa19.49■□□□□ 0.71
CNTNAP2-225ENST00000639247 U2SURPO15042 1029 aaKnown RBP19.48■□□□□ 0.71
CNTNAP2-225ENST00000639247 DIAPH1O60610 1272 aaKnown RBP19.48■□□□□ 0.71
CNTNAP2-225ENST00000639247 IL13P35225 146 aa19.48■□□□□ 0.71
CNTNAP2-225ENST00000639247 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
CNTNAP2-225ENST00000639247 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
CNTNAP2-225ENST00000639247 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
CNTNAP2-225ENST00000639247 RGPD2P0DJD1 1756 aa19.47■□□□□ 0.71
CNTNAP2-225ENST00000639247 C8orf37Q96NL8 207 aa19.47■□□□□ 0.71
CNTNAP2-225ENST00000639247 BTG4Q9NY30 223 aa19.47■□□□□ 0.71
CNTNAP2-225ENST00000639247 ANKRD24Q8TF21 1146 aa19.46■□□□□ 0.71
CNTNAP2-225ENST00000639247 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
CNTNAP2-225ENST00000639247 INSRP06213 1382 aa19.46■□□□□ 0.71
CNTNAP2-225ENST00000639247 HMOX1P09601 288 aa19.45■□□□□ 0.7
CNTNAP2-225ENST00000639247 AEBP1Q8IUX7 1158 aa19.45■□□□□ 0.7
CNTNAP2-225ENST00000639247 SPATA31A6Q5VVP1 1343 aa19.45■□□□□ 0.7
CNTNAP2-225ENST00000639247 RTL1A6NKG5 1358 aa19.45■□□□□ 0.7
CNTNAP2-225ENST00000639247 LMO7Q8WWI1 1683 aa19.44■□□□□ 0.7
CNTNAP2-225ENST00000639247 U2AF1L5P0DN76 240 aaPredicted RBP19.44■□□□□ 0.7
CNTNAP2-225ENST00000639247 U2AF1Q01081 240 aaKnown RBP eCLIP19.44■□□□□ 0.7
CNTNAP2-225ENST00000639247 NBPF6Q5VWK0 638 aa19.44■□□□□ 0.7
CNTNAP2-225ENST00000639247 NBPF4Q96M43 638 aa19.44■□□□□ 0.7
CNTNAP2-225ENST00000639247 EYA1Q99502 592 aa19.44■□□□□ 0.7
CNTNAP2-225ENST00000639247 ERBB3P21860 1342 aa19.43■□□□□ 0.7
CNTNAP2-225ENST00000639247 CCDC146Q8IYE0 955 aa19.43■□□□□ 0.7
CNTNAP2-225ENST00000639247 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
CNTNAP2-225ENST00000639247 KIF24Q5T7B8 1368 aa19.42■□□□□ 0.7
CNTNAP2-225ENST00000639247 CSB-PGBD3P0DP91 1061 aa19.42■□□□□ 0.7
CNTNAP2-225ENST00000639247 LARP1Q6PKG0 1096 aaKnown RBP19.42■□□□□ 0.7
CNTNAP2-225ENST00000639247 NGLY1Q96IV0 654 aa19.41■□□□□ 0.7
CNTNAP2-225ENST00000639247 COL5A2P05997 1499 aaPredicted RBP19.41■□□□□ 0.7
CNTNAP2-225ENST00000639247 BLMP54132 1417 aaPredicted RBP19.41■□□□□ 0.7
CNTNAP2-225ENST00000639247 PLCH1Q4KWH8 1693 aa19.41■□□□□ 0.7
CNTNAP2-225ENST00000639247 MEX3CQ5U5Q3 659 aaKnown RBP19.4■□□□□ 0.7
CNTNAP2-225ENST00000639247 YTHDC1Q96MU7 727 aaKnown RBP19.4■□□□□ 0.7
CNTNAP2-225ENST00000639247 USP35Q9P2H5 1018 aa19.4■□□□□ 0.7
CNTNAP2-225ENST00000639247 NLRP2Q9NX02 1062 aa19.4■□□□□ 0.7
CNTNAP2-225ENST00000639247 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
CNTNAP2-225ENST00000639247 EVA1CP58658 441 aa19.39■□□□□ 0.69
CNTNAP2-225ENST00000639247 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.69
CNTNAP2-225ENST00000639247 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
CNTNAP2-225ENST00000639247 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
CNTNAP2-225ENST00000639247 RGPD1P0DJD0 1748 aa19.38■□□□□ 0.69
CNTNAP2-225ENST00000639247 TOM1L2Q6ZVM7 507 aa19.37■□□□□ 0.69
CNTNAP2-225ENST00000639247 IGSF1Q8N6C5 1336 aa19.36■□□□□ 0.69
CNTNAP2-225ENST00000639247 WDR17Q8IZU2 1322 aa19.35■□□□□ 0.69
CNTNAP2-225ENST00000639247 SLIT2O94813 1529 aa19.35■□□□□ 0.69
CNTNAP2-225ENST00000639247 BCL9LQ86UU0 1499 aa19.35■□□□□ 0.69
CNTNAP2-225ENST00000639247 PRKAR2BP31323 418 aa19.35■□□□□ 0.69
CNTNAP2-225ENST00000639247 RSPH6AQ9H0K4 717 aa19.35■□□□□ 0.69
CNTNAP2-225ENST00000639247 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
CNTNAP2-225ENST00000639247 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
CNTNAP2-225ENST00000639247 ABCC6O95255 1503 aa19.34■□□□□ 0.69
CNTNAP2-225ENST00000639247 AFF2P51816 1311 aa19.33■□□□□ 0.69
CNTNAP2-225ENST00000639247 NRAPQ86VF7 1730 aa19.33■□□□□ 0.69
CNTNAP2-225ENST00000639247 FNBP4Q8N3X1 1017 aaPredicted RBP19.32■□□□□ 0.68
CNTNAP2-225ENST00000639247 PLEKHF1Q96S99 279 aa19.32■□□□□ 0.68
CNTNAP2-225ENST00000639247 USP21Q9UK80 565 aa19.32■□□□□ 0.68
CNTNAP2-225ENST00000639247 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
CNTNAP2-225ENST00000639247 CCDC9Q9Y3X0 531 aaKnown RBP19.31■□□□□ 0.68
CNTNAP2-225ENST00000639247 UNC5CLQ8IV45 518 aa19.31■□□□□ 0.68
CNTNAP2-225ENST00000639247 FAM208AQ9UK61 1670 aaKnown RBP19.3■□□□□ 0.68
CNTNAP2-225ENST00000639247 APAF1O14727 1248 aa19.29■□□□□ 0.68
CNTNAP2-225ENST00000639247 FCHSD2O94868 740 aa19.29■□□□□ 0.68
CNTNAP2-225ENST00000639247 NEUROD2Q15784 382 aa19.29■□□□□ 0.68
CNTNAP2-225ENST00000639247 NWD2Q9ULI1 1742 aa19.29■□□□□ 0.68
CNTNAP2-225ENST00000639247 KDRP35968 1356 aa19.29■□□□□ 0.68
CNTNAP2-225ENST00000639247 CRB1P82279 1406 aa19.29■□□□□ 0.68
CNTNAP2-225ENST00000639247 CARD10Q9BWT7 1032 aa19.28■□□□□ 0.68
CNTNAP2-225ENST00000639247 MEGF6O75095 1541 aa19.28■□□□□ 0.68
CNTNAP2-225ENST00000639247 HNRNPUQ00839 825 aaKnown RBP eCLIP19.27■□□□□ 0.68
CNTNAP2-225ENST00000639247 TCP11L2Q8N4U5 519 aa19.26■□□□□ 0.67
CNTNAP2-225ENST00000639247 RUNDC1Q96C34 613 aa19.26■□□□□ 0.67
CNTNAP2-225ENST00000639247 NCAPD2Q15021 1401 aa19.26■□□□□ 0.67
CNTNAP2-225ENST00000639247 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
CNTNAP2-225ENST00000639247 SPATA31A5Q5VU36 1347 aa19.25■□□□□ 0.67
CNTNAP2-225ENST00000639247 SPATA31A7Q8IWB4 1347 aa19.25■□□□□ 0.67
CNTNAP2-225ENST00000639247 MTHFSDQ2M296 383 aaKnown RBP19.24■□□□□ 0.67
CNTNAP2-225ENST00000639247 PELP1Q8IZL8 1130 aaKnown RBP19.24■□□□□ 0.67
CNTNAP2-225ENST00000639247 MAPK8IP3Q9UPT6 1336 aa19.23■□□□□ 0.67
CNTNAP2-225ENST00000639247 VPS72Q15906 364 aa19.23■□□□□ 0.67
CNTNAP2-225ENST00000639247 RAPGEF4Q8WZA2 1011 aa19.23■□□□□ 0.67
CNTNAP2-225ENST00000639247 RGS17Q9UGC6 210 aaPredicted RBP19.23■□□□□ 0.67
CNTNAP2-225ENST00000639247 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
CNTNAP2-225ENST00000639247 QTRT2Q9H974 415 aaKnown RBP19.22■□□□□ 0.67
CNTNAP2-225ENST00000639247 TMPOP42166 694 aaKnown RBP19.21■□□□□ 0.67
CNTNAP2-225ENST00000639247 IL2RBP14784 551 aa19.2■□□□□ 0.66
CNTNAP2-225ENST00000639247 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.2■□□□□ 0.66
CNTNAP2-225ENST00000639247 TATP17735 454 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms