RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
SCARB2-214ENST00000638843 KCNH5Q8NCM2 988 aa13.28□□□□□ -0.28
SCARB2-214ENST00000638843 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCARB2-214ENST00000638843 GLI3P10071 1580 aa13.28□□□□□ -0.28
SCARB2-214ENST00000638843 NRKQ7Z2Y5 1582 aa13.28□□□□□ -0.28
SCARB2-214ENST00000638843 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
SCARB2-214ENST00000638843 EVA1CP58658 441 aa13.28□□□□□ -0.28
SCARB2-214ENST00000638843 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
SCARB2-214ENST00000638843 SLIT3O75094 1523 aa13.27□□□□□ -0.28
SCARB2-214ENST00000638843 ANKRD36BQ8N2N9 1353 aa13.27□□□□□ -0.28
SCARB2-214ENST00000638843 COL14A1Q05707 1796 aaKnown RBP13.27□□□□□ -0.29
SCARB2-214ENST00000638843 PHRF1Q9P1Y6 1649 aaKnown RBP13.27□□□□□ -0.29
SCARB2-214ENST00000638843 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
SCARB2-214ENST00000638843 CAMTA1Q9Y6Y1 1673 aa13.27□□□□□ -0.29
SCARB2-214ENST00000638843 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
SCARB2-214ENST00000638843 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
SCARB2-214ENST00000638843 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-214ENST00000638843 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
SCARB2-214ENST00000638843 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
SCARB2-214ENST00000638843 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
SCARB2-214ENST00000638843 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.26□□□□□ -0.29
SCARB2-214ENST00000638843 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
SCARB2-214ENST00000638843 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
SCARB2-214ENST00000638843 POLR3GLQ9BT43 218 aa13.25□□□□□ -0.29
SCARB2-214ENST00000638843 CARD14Q9BXL6 1004 aa13.25□□□□□ -0.29
SCARB2-214ENST00000638843 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
SCARB2-214ENST00000638843 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
SCARB2-214ENST00000638843 A0A0G2JS52 829 aa13.24□□□□□ -0.29
SCARB2-214ENST00000638843 FYB1O15117 783 aa13.24□□□□□ -0.29
SCARB2-214ENST00000638843 MYT1Q01538 1121 aa13.24□□□□□ -0.29
SCARB2-214ENST00000638843 COL5A2P05997 1499 aaPredicted RBP13.23□□□□□ -0.29
SCARB2-214ENST00000638843 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
SCARB2-214ENST00000638843 FBLN1P23142 703 aa13.23□□□□□ -0.29
SCARB2-214ENST00000638843 OVOS2A0A0J9YW53 1432 aa13.23□□□□□ -0.29
SCARB2-214ENST00000638843 OVOS2Q6IE36 1432 aa13.23□□□□□ -0.29
SCARB2-214ENST00000638843 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
SCARB2-214ENST00000638843 KRT27Q7Z3Y8 459 aa13.22□□□□□ -0.29
SCARB2-214ENST00000638843 COG3Q96JB2 828 aa13.22□□□□□ -0.29
SCARB2-214ENST00000638843 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
SCARB2-214ENST00000638843 NFAT5O94916 1531 aa13.22□□□□□ -0.29
SCARB2-214ENST00000638843 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
SCARB2-214ENST00000638843 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.29
SCARB2-214ENST00000638843 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
SCARB2-214ENST00000638843 WDR17Q8IZU2 1322 aa13.2□□□□□ -0.3
SCARB2-214ENST00000638843 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
SCARB2-214ENST00000638843 NSD3Q9BZ95 1437 aa13.19□□□□□ -0.3
SCARB2-214ENST00000638843 FAM182BQ5T319 152 aa13.19□□□□□ -0.3
SCARB2-214ENST00000638843 CRB1P82279 1406 aa13.18□□□□□ -0.3
SCARB2-214ENST00000638843 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
SCARB2-214ENST00000638843 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
SCARB2-214ENST00000638843 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
SCARB2-214ENST00000638843 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
SCARB2-214ENST00000638843 PANK3Q9H999 370 aa13.17□□□□□ -0.3
SCARB2-214ENST00000638843 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
SCARB2-214ENST00000638843 IP6K1Q92551 441 aa13.16□□□□□ -0.3
SCARB2-214ENST00000638843 CARD10Q9BWT7 1032 aa13.16□□□□□ -0.3
SCARB2-214ENST00000638843 ERBB3P21860 1342 aa13.16□□□□□ -0.3
SCARB2-214ENST00000638843 KIF7Q2M1P5 1343 aa13.16□□□□□ -0.3
SCARB2-214ENST00000638843 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
SCARB2-214ENST00000638843 COL18A1P39060 1754 aa13.15□□□□□ -0.3
SCARB2-214ENST00000638843 USP54Q70EL1 1684 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 CGNL1Q0VF96 1302 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 SRCAPQ6ZRS2 3230 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 HOXC9P31274 260 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 AMPHP49418 695 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 CCDC125Q86Z20 511 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 MYOM1P52179 1685 aa13.14□□□□□ -0.31
SCARB2-214ENST00000638843 THSD7AQ9UPZ6 1657 aa13.13□□□□□ -0.31
SCARB2-214ENST00000638843 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
SCARB2-214ENST00000638843 LTV1Q96GA3 475 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-214ENST00000638843 ABCC6O95255 1503 aa13.12□□□□□ -0.31
SCARB2-214ENST00000638843 HAX1O00165 279 aa13.12□□□□□ -0.31
SCARB2-214ENST00000638843 BLMP54132 1417 aaPredicted RBP13.12□□□□□ -0.31
SCARB2-214ENST00000638843 CCDC7Q96M83 1385 aa13.11□□□□□ -0.31
SCARB2-214ENST00000638843 DDB1Q16531 1140 aa13.11□□□□□ -0.31
SCARB2-214ENST00000638843 FAM196AQ6ZSG2 479 aa13.11□□□□□ -0.31
SCARB2-214ENST00000638843 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
SCARB2-214ENST00000638843 CDCA7Q9BWT1 371 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-214ENST00000638843 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
SCARB2-214ENST00000638843 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
SCARB2-214ENST00000638843 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
SCARB2-214ENST00000638843 HSP90AB2PQ58FF8 381 aa13.1□□□□□ -0.31
SCARB2-214ENST00000638843 DISP2A7MBM2 1401 aa13.1□□□□□ -0.31
SCARB2-214ENST00000638843 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
SCARB2-214ENST00000638843 TNNT2P45379 298 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-214ENST00000638843 RTL1A6NKG5 1358 aa13.08□□□□□ -0.31
SCARB2-214ENST00000638843 TRIM37O94972 964 aa13.08□□□□□ -0.32
SCARB2-214ENST00000638843 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
SCARB2-214ENST00000638843 MARCH10Q8NA82 808 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-214ENST00000638843 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
SCARB2-214ENST00000638843 EXOC5O00471 708 aa13.07□□□□□ -0.32
SCARB2-214ENST00000638843 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-214ENST00000638843 PER1O15534 1290 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-214ENST00000638843 NBPF6Q5VWK0 638 aa13.07□□□□□ -0.32
SCARB2-214ENST00000638843 NBPF4Q96M43 638 aa13.07□□□□□ -0.32
SCARB2-214ENST00000638843 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
SCARB2-214ENST00000638843 FLT4P35916 1363 aa13.07□□□□□ -0.32
SCARB2-214ENST00000638843 IL2RBP14784 551 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms