RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 CRB1P82279 1406 aa17.5■□□□□ 0.39
GFAP-227ENST00000638400 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
GFAP-227ENST00000638400 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
GFAP-227ENST00000638400 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
GFAP-227ENST00000638400 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
GFAP-227ENST00000638400 ABCC6O95255 1503 aa17.49■□□□□ 0.39
GFAP-227ENST00000638400 THRAP3Q9Y2W1 955 aaKnown RBP17.49■□□□□ 0.39
GFAP-227ENST00000638400 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
GFAP-227ENST00000638400 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
GFAP-227ENST00000638400 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
GFAP-227ENST00000638400 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
GFAP-227ENST00000638400 TOM1L2Q6ZVM7 507 aa17.46■□□□□ 0.39
GFAP-227ENST00000638400 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
GFAP-227ENST00000638400 COL18A1P39060 1754 aa17.45■□□□□ 0.38
GFAP-227ENST00000638400 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
GFAP-227ENST00000638400 EIF4G2P78344 907 aaKnown RBP eCLIP17.44■□□□□ 0.38
GFAP-227ENST00000638400 COG3Q96JB2 828 aa17.44■□□□□ 0.38
GFAP-227ENST00000638400 PDE3BQ13370 1112 aa17.43■□□□□ 0.38
GFAP-227ENST00000638400 FAM182BQ5T319 152 aa17.43■□□□□ 0.38
GFAP-227ENST00000638400 HSPA5P11021 654 aaKnown RBP17.41■□□□□ 0.38
GFAP-227ENST00000638400 FAM196AQ6ZSG2 479 aa17.41■□□□□ 0.38
GFAP-227ENST00000638400 CARD10Q9BWT7 1032 aa17.41■□□□□ 0.38
GFAP-227ENST00000638400 CDCA7Q9BWT1 371 aaPredicted RBP17.4■□□□□ 0.38
GFAP-227ENST00000638400 ERBB3P21860 1342 aa17.4■□□□□ 0.38
GFAP-227ENST00000638400 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
GFAP-227ENST00000638400 CCDC7Q96M83 1385 aa17.39■□□□□ 0.37
GFAP-227ENST00000638400 FYB1O15117 783 aa17.38■□□□□ 0.37
GFAP-227ENST00000638400 BAG6P46379 1132 aa17.38■□□□□ 0.37
GFAP-227ENST00000638400 MYOM1P52179 1685 aa17.38■□□□□ 0.37
GFAP-227ENST00000638400 PARP4Q9UKK3 1724 aaKnown RBP17.38■□□□□ 0.37
GFAP-227ENST00000638400 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
GFAP-227ENST00000638400 DDB1Q16531 1140 aa17.37■□□□□ 0.37
GFAP-227ENST00000638400 ANKRD24Q8TF21 1146 aa17.37■□□□□ 0.37
GFAP-227ENST00000638400 GGNBP2Q9H3C7 697 aa17.37■□□□□ 0.37
GFAP-227ENST00000638400 DISP2A7MBM2 1401 aa17.37■□□□□ 0.37
GFAP-227ENST00000638400 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
GFAP-227ENST00000638400 IP6K1Q92551 441 aa17.36■□□□□ 0.37
GFAP-227ENST00000638400 POLR3GLQ9BT43 218 aa17.36■□□□□ 0.37
GFAP-227ENST00000638400 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
GFAP-227ENST00000638400 NLRP2Q9NX02 1062 aa17.36■□□□□ 0.37
GFAP-227ENST00000638400 MAP3K19Q56UN5 1328 aa17.36■□□□□ 0.37
GFAP-227ENST00000638400 LRRC37A3O60309 1634 aa17.36■□□□□ 0.37
GFAP-227ENST00000638400 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
GFAP-227ENST00000638400 OVOS2A0A0G2JMS6 1433 aa17.35■□□□□ 0.37
GFAP-227ENST00000638400 LTN1O94822 1766 aa17.34■□□□□ 0.37
GFAP-227ENST00000638400 TRIM37O94972 964 aa17.34■□□□□ 0.37
GFAP-227ENST00000638400 RGPD1P0DJD0 1748 aa17.34■□□□□ 0.37
GFAP-227ENST00000638400 HOXC9P31274 260 aa17.33■□□□□ 0.36
GFAP-227ENST00000638400 AMPHP49418 695 aa17.33■□□□□ 0.36
GFAP-227ENST00000638400 TNS2Q63HR2 1409 aa17.31■□□□□ 0.36
GFAP-227ENST00000638400 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
GFAP-227ENST00000638400 RGPD5Q99666 1765 aa17.31■□□□□ 0.36
GFAP-227ENST00000638400 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
GFAP-227ENST00000638400 FBLN1P23142 703 aa17.31■□□□□ 0.36
GFAP-227ENST00000638400 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
GFAP-227ENST00000638400 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
GFAP-227ENST00000638400 EN1Q05925 392 aaPredicted RBP17.3■□□□□ 0.36
GFAP-227ENST00000638400 RRS1Q15050 365 aaKnown RBP17.3■□□□□ 0.36
GFAP-227ENST00000638400 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
GFAP-227ENST00000638400 EXOC5O00471 708 aa17.29■□□□□ 0.36
GFAP-227ENST00000638400 APBA3O96018 575 aa17.29■□□□□ 0.36
GFAP-227ENST00000638400 IL2RBP14784 551 aa17.29■□□□□ 0.36
GFAP-227ENST00000638400 MARCH10Q8NA82 808 aaPredicted RBP17.29■□□□□ 0.36
GFAP-227ENST00000638400 BCL9O00512 1426 aa17.29■□□□□ 0.36
GFAP-227ENST00000638400 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
GFAP-227ENST00000638400 PARD3Q8TEW0 1356 aa17.28■□□□□ 0.36
GFAP-227ENST00000638400 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
GFAP-227ENST00000638400 PEAK1Q9H792 1746 aa17.28■□□□□ 0.36
GFAP-227ENST00000638400 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
GFAP-227ENST00000638400 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
GFAP-227ENST00000638400 FLT4P35916 1363 aa17.27■□□□□ 0.35
GFAP-227ENST00000638400 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
GFAP-227ENST00000638400 CAMKK2Q96RR4 588 aa17.26■□□□□ 0.35
GFAP-227ENST00000638400 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
GFAP-227ENST00000638400 PANK3Q9H999 370 aa17.25■□□□□ 0.35
GFAP-227ENST00000638400 INSRP06213 1382 aa17.25■□□□□ 0.35
GFAP-227ENST00000638400 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
GFAP-227ENST00000638400 EMILIN1Q9Y6C2 1016 aa17.23■□□□□ 0.35
GFAP-227ENST00000638400 SRCAPQ6ZRS2 3230 aa17.23■□□□□ 0.35
GFAP-227ENST00000638400 NSD2O96028 1365 aa17.23■□□□□ 0.35
GFAP-227ENST00000638400 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
GFAP-227ENST00000638400 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
GFAP-227ENST00000638400 NBPF6Q5VWK0 638 aa17.2■□□□□ 0.34
GFAP-227ENST00000638400 NBPF4Q96M43 638 aa17.2■□□□□ 0.34
GFAP-227ENST00000638400 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
GFAP-227ENST00000638400 PTF1AQ7RTS3 328 aa17.19■□□□□ 0.34
GFAP-227ENST00000638400 MEGF6O75095 1541 aa17.19■□□□□ 0.34
GFAP-227ENST00000638400 PSDA5PKW4 1024 aaPredicted RBP17.18■□□□□ 0.34
GFAP-227ENST00000638400 PLSCR1O15162 318 aa17.18■□□□□ 0.34
GFAP-227ENST00000638400 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
GFAP-227ENST00000638400 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
GFAP-227ENST00000638400 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
GFAP-227ENST00000638400 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
GFAP-227ENST00000638400 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
GFAP-227ENST00000638400 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
GFAP-227ENST00000638400 POLKQ9UBT6 870 aa17.17■□□□□ 0.34
GFAP-227ENST00000638400 ANKRD26Q9UPS8 1709 aa17.16■□□□□ 0.34
GFAP-227ENST00000638400 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
GFAP-227ENST00000638400 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
GFAP-227ENST00000638400 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms