RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 ZNF76P36508 570 aa22.45■■□□□ 1.18
CACNA1A-246ENST00000637736 SLC26A8Q96RN1 970 aa22.45■■□□□ 1.18
CACNA1A-246ENST00000637736 CNTLNQ9NXG0 1405 aa22.45■■□□□ 1.18
CACNA1A-246ENST00000637736 HMGB2P26583 209 aaKnown RBP22.44■■□□□ 1.18
CACNA1A-246ENST00000637736 JAKMIP3Q5VZ66 844 aa22.44■■□□□ 1.18
CACNA1A-246ENST00000637736 SSBP05455 408 aaKnown RBP eCLIP22.44■■□□□ 1.18
CACNA1A-246ENST00000637736 FANCIQ9NVI1 1328 aa22.44■■□□□ 1.18
CACNA1A-246ENST00000637736 MAP2K1Q02750 393 aaPredicted RBP22.44■■□□□ 1.18
CACNA1A-246ENST00000637736 CHMP4BP1P59074 171 aa22.44■■□□□ 1.18
CACNA1A-246ENST00000637736 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.44■■□□□ 1.18
CACNA1A-246ENST00000637736 POTEJP0CG39 1038 aa22.43■■□□□ 1.18
CACNA1A-246ENST00000637736 PLEKHO1Q53GL0 409 aaPredicted RBP22.43■■□□□ 1.18
CACNA1A-246ENST00000637736 ZSCAN25Q6NSZ9 544 aa22.43■■□□□ 1.18
CACNA1A-246ENST00000637736 ZSCAN29Q8IWY8 852 aaPredicted RBP22.43■■□□□ 1.18
CACNA1A-246ENST00000637736 ABTB2Q8N961 1025 aa22.43■■□□□ 1.18
CACNA1A-246ENST00000637736 SCAPERQ9BY12 1400 aa22.43■■□□□ 1.18
CACNA1A-246ENST00000637736 WDR70Q9NW82 654 aa22.43■■□□□ 1.18
CACNA1A-246ENST00000637736 PPM1EQ8WY54 764 aa22.42■■□□□ 1.18
CACNA1A-246ENST00000637736 GIMAP7Q8NHV1 300 aa22.42■■□□□ 1.18
CACNA1A-246ENST00000637736 RBM42Q9BTD8 480 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-246ENST00000637736 CDKL5O76039 1030 aa22.42■■□□□ 1.18
CACNA1A-246ENST00000637736 AEBP1Q8IUX7 1158 aa22.42■■□□□ 1.18
CACNA1A-246ENST00000637736 BMP2KQ9NSY1 1161 aaPredicted RBP22.42■■□□□ 1.18
CACNA1A-246ENST00000637736 NUTM2GQ5VZR2 741 aa22.42■■□□□ 1.18
CACNA1A-246ENST00000637736 GNAI2P04899 355 aa22.41■■□□□ 1.18
CACNA1A-246ENST00000637736 ERLIN1O75477 346 aa22.41■■□□□ 1.18
CACNA1A-246ENST00000637736 SURF6O75683 361 aaKnown RBP22.41■■□□□ 1.18
CACNA1A-246ENST00000637736 CCDC192P0DO97 292 aa22.41■■□□□ 1.18
CACNA1A-246ENST00000637736 KIAA1328Q86T90 577 aa22.41■■□□□ 1.18
CACNA1A-246ENST00000637736 PSMD1Q99460 953 aa22.41■■□□□ 1.18
CACNA1A-246ENST00000637736 CBFA2T2O43439 604 aa22.4■■□□□ 1.18
CACNA1A-246ENST00000637736 NUP133Q8WUM0 1156 aa22.4■■□□□ 1.18
CACNA1A-246ENST00000637736 NFKBIBQ15653 356 aa22.39■■□□□ 1.18
CACNA1A-246ENST00000637736 NOL7Q9UMY1 257 aaKnown RBP22.39■■□□□ 1.18
CACNA1A-246ENST00000637736 DDX23Q9BUQ8 820 aaKnown RBP22.39■■□□□ 1.17
CACNA1A-246ENST00000637736 ME1P48163 572 aa22.39■■□□□ 1.17
CACNA1A-246ENST00000637736 USP8P40818 1118 aa22.39■■□□□ 1.17
CACNA1A-246ENST00000637736 FIBPO43427 364 aa22.38■■□□□ 1.17
CACNA1A-246ENST00000637736 CCDC113Q9H0I3 377 aa22.38■■□□□ 1.17
CACNA1A-246ENST00000637736 CFAP45Q9UL16 551 aa22.38■■□□□ 1.17
CACNA1A-246ENST00000637736 SUPT6HQ7KZ85 1726 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-246ENST00000637736 STK3Q13188 491 aa22.38■■□□□ 1.17
CACNA1A-246ENST00000637736 COMMD10Q9Y6G5 202 aa22.38■■□□□ 1.17
CACNA1A-246ENST00000637736 NLRP6P59044 892 aa22.37■■□□□ 1.17
CACNA1A-246ENST00000637736 CETN2P41208 172 aa22.37■■□□□ 1.17
CACNA1A-246ENST00000637736 CCDC57Q2TAC2 916 aa22.37■■□□□ 1.17
CACNA1A-246ENST00000637736 CYB5RLQ6IPT4 315 aa22.37■■□□□ 1.17
CACNA1A-246ENST00000637736 SCLT1Q96NL6 688 aa22.37■■□□□ 1.17
CACNA1A-246ENST00000637736 CYP46A1Q9Y6A2 500 aa22.36■■□□□ 1.17
CACNA1A-246ENST00000637736 MYCNP04198 464 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-246ENST00000637736 MPHOSPH8Q99549 860 aa22.36■■□□□ 1.17
CACNA1A-246ENST00000637736 TNMDQ9H2S6 317 aa22.36■■□□□ 1.17
CACNA1A-246ENST00000637736 NEK4P51957 841 aa22.36■■□□□ 1.17
CACNA1A-246ENST00000637736 RBM10P98175 930 aaKnown RBP22.35■■□□□ 1.17
CACNA1A-246ENST00000637736 PRPF40AO75400 957 aaKnown RBP22.35■■□□□ 1.17
CACNA1A-246ENST00000637736 TAF4BQ92750 862 aa22.35■■□□□ 1.17
CACNA1A-246ENST00000637736 CCDC102AQ96A19 550 aa22.35■■□□□ 1.17
CACNA1A-246ENST00000637736 ZNF397Q8NF99 534 aaPredicted RBP22.34■■□□□ 1.17
CACNA1A-246ENST00000637736 DRC1Q96MC2 740 aa22.34■■□□□ 1.17
CACNA1A-246ENST00000637736 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
CACNA1A-246ENST00000637736 EPB41L2O43491 1005 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-246ENST00000637736 GCC1Q96CN9 775 aa22.34■■□□□ 1.17
CACNA1A-246ENST00000637736 USP5P45974 858 aa22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 KIF21BO75037 1637 aa22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 PANK1Q8TE04 598 aa22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 PPP1R12BO60237 982 aaPredicted RBP22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 CCT4P50991 539 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 TATP17735 454 aaPredicted RBP22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 PUS7Q96PZ0 661 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 STRN4Q9NRL3 753 aa22.33■■□□□ 1.17
CACNA1A-246ENST00000637736 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
CACNA1A-246ENST00000637736 HOMER2Q9NSB8 354 aa22.33■■□□□ 1.16
CACNA1A-246ENST00000637736 TRAK2O60296 914 aa22.32■■□□□ 1.16
CACNA1A-246ENST00000637736 PDIA4P13667 645 aaKnown RBP22.32■■□□□ 1.16
CACNA1A-246ENST00000637736 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
CACNA1A-246ENST00000637736 SRCIN1Q9C0H9 1055 aa22.32■■□□□ 1.16
CACNA1A-246ENST00000637736 BRD4O60885 1362 aaPredicted RBP22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 CEP57L1Q8IYX8 460 aa22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 PIBF1Q8WXW3 757 aa22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 CCDC7Q96M83 1385 aa22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 GOPCQ9HD26 462 aa22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 PPP4R3AQ6IN85 833 aa22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 ZNF287Q9HBT7 754 aa22.31■■□□□ 1.16
CACNA1A-246ENST00000637736 CABP4P57796 275 aa22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 FEZ1Q99689 392 aa22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 KRT85P78386 507 aa22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 UBE4AQ14139 1066 aa22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 WDR33Q9C0J8 1336 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 TNIP1Q15025 636 aa22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 BCCIPQ9P287 314 aaKnown RBP eCLIP22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 ZNF428Q96B54 188 aa22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 WASF1Q92558 559 aa22.3■■□□□ 1.16
CACNA1A-246ENST00000637736 ESCO1Q5FWF5 840 aa22.29■■□□□ 1.16
CACNA1A-246ENST00000637736 PNISRQ8TF01 805 aaKnown RBP22.29■■□□□ 1.16
CACNA1A-246ENST00000637736 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
CACNA1A-246ENST00000637736 CEP131Q9UPN4 1083 aa22.29■■□□□ 1.16
CACNA1A-246ENST00000637736 CCDC148Q8NFR7 591 aa22.29■■□□□ 1.16
CACNA1A-246ENST00000637736 CCDC150Q8NCX0 1101 aa22.28■■□□□ 1.16
CACNA1A-246ENST00000637736 GSTTP1A0A1W2PQM5 241 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms