RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
LINC00643-207ENST00000637212 FCHSD2O94868 740 aa17.81■□□□□ 0.44
LINC00643-207ENST00000637212 MARF1Q9Y4F3 1742 aaKnown RBP17.79■□□□□ 0.44
LINC00643-207ENST00000637212 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
LINC00643-207ENST00000637212 JCADQ9P266 1359 aa17.79■□□□□ 0.44
LINC00643-207ENST00000637212 ZBTB7CA1YPR0 619 aa17.78■□□□□ 0.44
LINC00643-207ENST00000637212 AXIN2Q9Y2T1 843 aa17.78■□□□□ 0.44
LINC00643-207ENST00000637212 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
LINC00643-207ENST00000637212 FAM83GA6ND36 823 aa17.77■□□□□ 0.44
LINC00643-207ENST00000637212 RUNDC1Q96C34 613 aa17.77■□□□□ 0.44
LINC00643-207ENST00000637212 PRDM11Q9NQV5 511 aa17.77■□□□□ 0.44
LINC00643-207ENST00000637212 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
LINC00643-207ENST00000637212 PHLPP1O60346 1717 aa17.76■□□□□ 0.43
LINC00643-207ENST00000637212 NGEFQ8N5V2 710 aa17.76■□□□□ 0.43
LINC00643-207ENST00000637212 EYA1Q99502 592 aa17.76■□□□□ 0.43
LINC00643-207ENST00000637212 MAP2P11137 1827 aaKnown RBP17.76■□□□□ 0.43
LINC00643-207ENST00000637212 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
LINC00643-207ENST00000637212 ANKRD24Q8TF21 1146 aa17.75■□□□□ 0.43
LINC00643-207ENST00000637212 SPATA31A6Q5VVP1 1343 aa17.74■□□□□ 0.43
LINC00643-207ENST00000637212 ABCC6O95255 1503 aa17.74■□□□□ 0.43
LINC00643-207ENST00000637212 CHRNA2Q15822 529 aa17.74■□□□□ 0.43
LINC00643-207ENST00000637212 LTV1Q96GA3 475 aaPredicted RBP17.74■□□□□ 0.43
LINC00643-207ENST00000637212 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
LINC00643-207ENST00000637212 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
LINC00643-207ENST00000637212 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
LINC00643-207ENST00000637212 HNRNPUQ00839 825 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00643-207ENST00000637212 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
LINC00643-207ENST00000637212 YTHDC1Q96MU7 727 aaKnown RBP17.73■□□□□ 0.43
LINC00643-207ENST00000637212 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
LINC00643-207ENST00000637212 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
LINC00643-207ENST00000637212 PEAK1Q9H792 1746 aa17.72■□□□□ 0.43
LINC00643-207ENST00000637212 NEFMP07197 916 aa17.72■□□□□ 0.43
LINC00643-207ENST00000637212 ERBB3P21860 1342 aa17.72■□□□□ 0.43
LINC00643-207ENST00000637212 NBPF6Q5VWK0 638 aa17.71■□□□□ 0.43
LINC00643-207ENST00000637212 NBPF4Q96M43 638 aa17.71■□□□□ 0.43
LINC00643-207ENST00000637212 NUTM2BA6NNL0 878 aaPredicted RBP17.7■□□□□ 0.42
LINC00643-207ENST00000637212 NUTM2EB1AL46 878 aaPredicted RBP17.7■□□□□ 0.42
LINC00643-207ENST00000637212 HMOX1P09601 288 aa17.7■□□□□ 0.42
LINC00643-207ENST00000637212 EVA1CP58658 441 aa17.7■□□□□ 0.42
LINC00643-207ENST00000637212 NUTM2AQ8IVF1 878 aaPredicted RBP17.7■□□□□ 0.42
LINC00643-207ENST00000637212 CCDC146Q8IYE0 955 aa17.7■□□□□ 0.42
LINC00643-207ENST00000637212 APAF1O14727 1248 aa17.69■□□□□ 0.42
LINC00643-207ENST00000637212 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
LINC00643-207ENST00000637212 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
LINC00643-207ENST00000637212 KDRP35968 1356 aa17.68■□□□□ 0.42
LINC00643-207ENST00000637212 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
LINC00643-207ENST00000637212 TCP11L2Q8N4U5 519 aa17.68■□□□□ 0.42
LINC00643-207ENST00000637212 MAPK8IP3Q9UPT6 1336 aa17.68■□□□□ 0.42
LINC00643-207ENST00000637212 ADAMTS2O95450 1211 aa17.67■□□□□ 0.42
LINC00643-207ENST00000637212 AEBP1Q8IUX7 1158 aa17.67■□□□□ 0.42
LINC00643-207ENST00000637212 NLRP2Q9NX02 1062 aa17.67■□□□□ 0.42
LINC00643-207ENST00000637212 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
LINC00643-207ENST00000637212 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
LINC00643-207ENST00000637212 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
LINC00643-207ENST00000637212 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
LINC00643-207ENST00000637212 CCDC27Q2M243 656 aa17.65■□□□□ 0.42
LINC00643-207ENST00000637212 PHACTR3Q96KR7 559 aa17.65■□□□□ 0.42
LINC00643-207ENST00000637212 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
LINC00643-207ENST00000637212 CAMTA1Q9Y6Y1 1673 aa17.64■□□□□ 0.42
LINC00643-207ENST00000637212 COL18A1P39060 1754 aa17.64■□□□□ 0.41
LINC00643-207ENST00000637212 TMPOP42166 694 aaKnown RBP17.64■□□□□ 0.41
LINC00643-207ENST00000637212 NCAPD2Q15021 1401 aa17.64■□□□□ 0.41
LINC00643-207ENST00000637212 NFE2L2Q16236 605 aa17.63■□□□□ 0.41
LINC00643-207ENST00000637212 TOM1L2Q6ZVM7 507 aa17.63■□□□□ 0.41
LINC00643-207ENST00000637212 LTN1O94822 1766 aa17.63■□□□□ 0.41
LINC00643-207ENST00000637212 PDE3BQ13370 1112 aa17.62■□□□□ 0.41
LINC00643-207ENST00000637212 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
LINC00643-207ENST00000637212 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
LINC00643-207ENST00000637212 NGLY1Q96IV0 654 aa17.62■□□□□ 0.41
LINC00643-207ENST00000637212 PLEKHG2Q9H7P9 1386 aa17.62■□□□□ 0.41
LINC00643-207ENST00000637212 COL5A2P05997 1499 aaPredicted RBP17.62■□□□□ 0.41
LINC00643-207ENST00000637212 PLEKHO1Q53GL0 409 aaPredicted RBP17.61■□□□□ 0.41
LINC00643-207ENST00000637212 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
LINC00643-207ENST00000637212 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
LINC00643-207ENST00000637212 GAS2L2Q8NHY3 880 aa17.61■□□□□ 0.41
LINC00643-207ENST00000637212 STRN4Q9NRL3 753 aa17.61■□□□□ 0.41
LINC00643-207ENST00000637212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC00643-207ENST00000637212 RIPK4P57078 832 aa17.6■□□□□ 0.41
LINC00643-207ENST00000637212 RAPGEF4Q8WZA2 1011 aa17.6■□□□□ 0.41
LINC00643-207ENST00000637212 LMO7Q8WWI1 1683 aa17.6■□□□□ 0.41
LINC00643-207ENST00000637212 ABCA3Q99758 1704 aa17.6■□□□□ 0.41
LINC00643-207ENST00000637212 RGPD1P0DJD0 1748 aa17.59■□□□□ 0.41
LINC00643-207ENST00000637212 HTATSF1O43719 755 aaKnown RBP17.59■□□□□ 0.41
LINC00643-207ENST00000637212 TATP17735 454 aaPredicted RBP17.59■□□□□ 0.41
LINC00643-207ENST00000637212 LMOD3Q0VAK6 560 aa17.59■□□□□ 0.41
LINC00643-207ENST00000637212 UNC5CLQ8IV45 518 aa17.59■□□□□ 0.41
LINC00643-207ENST00000637212 WDR63Q8IWG1 891 aa17.59■□□□□ 0.41
LINC00643-207ENST00000637212 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
LINC00643-207ENST00000637212 SALL2Q9Y467 1007 aaPredicted RBP17.59■□□□□ 0.41
LINC00643-207ENST00000637212 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.41
LINC00643-207ENST00000637212 CRB1P82279 1406 aa17.58■□□□□ 0.41
LINC00643-207ENST00000637212 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
LINC00643-207ENST00000637212 NEUROD2Q15784 382 aa17.58■□□□□ 0.4
LINC00643-207ENST00000637212 MTHFSDQ2M296 383 aaKnown RBP17.58■□□□□ 0.4
LINC00643-207ENST00000637212 MEX3CQ5U5Q3 659 aaKnown RBP17.58■□□□□ 0.4
LINC00643-207ENST00000637212 C8orf37Q96NL8 207 aa17.58■□□□□ 0.4
LINC00643-207ENST00000637212 RRP7AQ9Y3A4 280 aaKnown RBP17.58■□□□□ 0.4
LINC00643-207ENST00000637212 SLIT2O94813 1529 aa17.57■□□□□ 0.4
LINC00643-207ENST00000637212 CENPBP07199 599 aaPredicted RBP17.57■□□□□ 0.4
LINC00643-207ENST00000637212 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms