RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 FBXO31Q5XUX0 539 aaPredicted RBP3.82□□□□□ -1.8
SYNGAP1-220ENST00000637194 LINC00528Q8N1L1 170 aa3.82□□□□□ -1.8
SYNGAP1-220ENST00000637194 LRRN4Q8WUT4 740 aa3.82□□□□□ -1.8
SYNGAP1-220ENST00000637194 TSEN34Q9BSV6 310 aaKnown RBP3.82□□□□□ -1.8
SYNGAP1-220ENST00000637194 CARD14Q9BXL6 1004 aa3.82□□□□□ -1.8
SYNGAP1-220ENST00000637194 PGPEP1Q9NXJ5 209 aa3.82□□□□□ -1.8
SYNGAP1-220ENST00000637194 SOS2Q07890 1332 aaPredicted RBP3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 MAN1A2O60476 641 aa3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 SLC24A1O60721 1099 aa3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 BMP2P12643 396 aa3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 GMPRP36959 345 aa3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 DHX9Q08211 1270 aaKnown RBP3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 Q6ZVU0 165 aa3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 ZBTB33Q86T24 672 aa3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 SLC10A4Q96EP9 437 aa3.81□□□□□ -1.8
SYNGAP1-220ENST00000637194 ERBB4Q15303 1308 aa3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 FAM181BA6NEQ2 426 aa3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 AP1G2O75843 785 aa3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 USP17L8P0C7I0 530 aa3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 C6orf118Q5T5N4 469 aa3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 PPP1R26Q5T8A7 1209 aaPredicted RBP3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 KCTD15Q96SI1 283 aaPredicted RBP3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 OCSTAMPQ9BR26 566 aa3.8□□□□□ -1.8
SYNGAP1-220ENST00000637194 SOBPA7XYQ1 873 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 SPINT1O43278 529 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 RFC5P40937 340 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 VEGFBP49765 207 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 NBPF20Q3BBV1 942 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 TMEM259Q4ZIN3 620 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 ZSCAN1Q8NBB4 408 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 ADAM32Q8TC27 787 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 PCMTD1Q96MG8 357 aaPredicted RBP3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 DNMT3LQ9UJW3 386 aa3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 ATP1B4Q9UN42 357 aaPredicted RBP3.79□□□□□ -1.8
SYNGAP1-220ENST00000637194 TTLL8A6PVC2 850 aa3.78□□□□□ -1.8
SYNGAP1-220ENST00000637194 PPFIA3O75145 1194 aa3.78□□□□□ -1.8
SYNGAP1-220ENST00000637194 INTS6LQ5JSJ4 861 aaKnown RBP3.78□□□□□ -1.8
SYNGAP1-220ENST00000637194 TRIM52Q96A61 297 aa3.78□□□□□ -1.8
SYNGAP1-220ENST00000637194 HMX1Q9NP08 348 aaPredicted RBP3.78□□□□□ -1.8
SYNGAP1-220ENST00000637194 ESPNB1AK53 854 aa3.77□□□□□ -1.81
SYNGAP1-220ENST00000637194 SOCS7O14512 581 aa3.77□□□□□ -1.81
SYNGAP1-220ENST00000637194 CBLBQ13191 982 aa3.77□□□□□ -1.81
SYNGAP1-220ENST00000637194 CCDC125Q86Z20 511 aa3.77□□□□□ -1.81
SYNGAP1-220ENST00000637194 SEPT12Q8IYM1 358 aa3.77□□□□□ -1.81
SYNGAP1-220ENST00000637194 EPS8L1Q8TE68 723 aa3.77□□□□□ -1.81
SYNGAP1-220ENST00000637194 DZIP3Q86Y13 1208 aaKnown RBP3.76□□□□□ -1.81
SYNGAP1-220ENST00000637194 NANOS1Q8WY41 292 aaKnown RBP3.76□□□□□ -1.81
SYNGAP1-220ENST00000637194 TRIM34Q9BYJ4 488 aa3.76□□□□□ -1.81
SYNGAP1-220ENST00000637194 ADH1AP07327 375 aa3.75□□□□□ -1.81
SYNGAP1-220ENST00000637194 PTSQ03393 145 aa3.75□□□□□ -1.81
SYNGAP1-220ENST00000637194 NEUROD2Q15784 382 aa3.75□□□□□ -1.81
SYNGAP1-220ENST00000637194 ZNF592Q92610 1267 aa3.75□□□□□ -1.81
SYNGAP1-220ENST00000637194 SLC35F4A4IF30 521 aa3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 ZBBXA8MT70 800 aa3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 ERVH48-1M5A8F1 160 aa3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 LILRA1O75019 489 aa3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 PTGIRP43119 386 aa3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 MCCD1P59942 119 aaPredicted RBP3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 CCDC155Q8N6L0 562 aa3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 ZNF784Q8NCA9 323 aaPredicted RBP3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 BANK1Q8NDB2 785 aa3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 GJD4Q96KN9 370 aaPredicted RBP3.74□□□□□ -1.81
SYNGAP1-220ENST00000637194 FIGNL2A6NMB9 653 aa3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 CTSOP43234 321 aaPredicted RBP3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 BRPF1P55201 1214 aaPredicted RBP3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 RELBQ01201 579 aa3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 IL27Q8NEV9 243 aa3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 RNF217Q8TC41 542 aa3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 AGBL1Q96MI9 1066 aa3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 INSM2Q96T92 566 aaPredicted RBP3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 TMPRSS4Q9NRS4 437 aa3.73□□□□□ -1.81
SYNGAP1-220ENST00000637194 APBB1O00213 710 aa3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 FBXO45P0C2W1 286 aa3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 ITGA6P23229 1130 aa3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 ADD1P35611 737 aaKnown RBP3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 NR1H3Q13133 447 aa3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 RNF20Q5VTR2 975 aa3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 FOXD4L5Q5VV16 416 aaPredicted RBP3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 GPR161Q8N6U8 529 aaKnown RBP3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 KDF1Q8NAX2 398 aaPredicted RBP3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 POLMQ9NP87 494 aaPredicted RBP3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 ZNF330Q9Y3S2 320 aaPredicted RBP3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 PCDHB9Q9Y5E1 797 aa3.72□□□□□ -1.81
SYNGAP1-220ENST00000637194 GPC1P35052 558 aa3.71□□□□□ -1.82
SYNGAP1-220ENST00000637194 RNF144AP50876 292 aaPredicted RBP3.71□□□□□ -1.82
SYNGAP1-220ENST00000637194 RAB15P59190 212 aa3.71□□□□□ -1.82
SYNGAP1-220ENST00000637194 ERVK-9P63128 1117 aa3.71□□□□□ -1.82
SYNGAP1-220ENST00000637194 KRT76Q01546 638 aa3.71□□□□□ -1.82
SYNGAP1-220ENST00000637194 SV2AQ7L0J3 742 aa3.71□□□□□ -1.82
SYNGAP1-220ENST00000637194 ZNF395Q9H8N7 513 aaPredicted RBP3.71□□□□□ -1.82
SYNGAP1-220ENST00000637194 SENP3-EIF4A1A0A087X0R7 540 aa3.7□□□□□ -1.82
SYNGAP1-220ENST00000637194 ATP5J2-PTCD1G3V325 749 aa3.7□□□□□ -1.82
SYNGAP1-220ENST00000637194 GPR37L1O60883 481 aa3.7□□□□□ -1.82
SYNGAP1-220ENST00000637194 GIGYF1O75420 1035 aaPredicted RBP3.7□□□□□ -1.82
SYNGAP1-220ENST00000637194 CC2D2BQ6DHV5 1058 aa3.7□□□□□ -1.82
SYNGAP1-220ENST00000637194 LYSMD3Q7Z3D4 306 aa3.7□□□□□ -1.82
SYNGAP1-220ENST00000637194 GMCL1Q96IK5 515 aa3.7□□□□□ -1.82
SYNGAP1-220ENST00000637194 COL25A1Q9BXS0 654 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms