RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 TRIM47Q96LD4 638 aa9.24□□□□□ -0.93
CLN8-210ENST00000636605 RUSC2Q8N2Y8 1516 aa9.24□□□□□ -0.93
CLN8-210ENST00000636605 C11orf95C9JLR9 678 aaPredicted RBP9.23□□□□□ -0.93
CLN8-210ENST00000636605 SHROOM2Q13796 1616 aa9.23□□□□□ -0.93
CLN8-210ENST00000636605 CARMIL2Q6F5E8 1435 aa9.22□□□□□ -0.93
CLN8-210ENST00000636605 PRXQ9BXM0 1461 aa9.22□□□□□ -0.93
CLN8-210ENST00000636605 CTHP32929 405 aa9.22□□□□□ -0.93
CLN8-210ENST00000636605 PRG4Q92954 1404 aaPredicted RBP9.22□□□□□ -0.93
CLN8-210ENST00000636605 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
CLN8-210ENST00000636605 BCANQ96GW7 911 aa9.21□□□□□ -0.94
CLN8-210ENST00000636605 SENP2Q9HC62 589 aa9.21□□□□□ -0.94
CLN8-210ENST00000636605 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
CLN8-210ENST00000636605 RTL5Q5HYW3 569 aaPredicted RBP9.2□□□□□ -0.94
CLN8-210ENST00000636605 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
CLN8-210ENST00000636605 WASF2Q9Y6W5 498 aa9.2□□□□□ -0.94
CLN8-210ENST00000636605 ARAP1Q96P48 1450 aa9.2□□□□□ -0.94
CLN8-210ENST00000636605 IQGAP2Q13576 1575 aa9.2□□□□□ -0.94
CLN8-210ENST00000636605 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
CLN8-210ENST00000636605 FOXJ1Q92949 421 aa9.19□□□□□ -0.94
CLN8-210ENST00000636605 NUTM2BA6NNL0 878 aaPredicted RBP9.18□□□□□ -0.94
CLN8-210ENST00000636605 NUTM2EB1AL46 878 aaPredicted RBP9.18□□□□□ -0.94
CLN8-210ENST00000636605 NUTM2DQ5VT03 806 aaPredicted RBP9.18□□□□□ -0.94
CLN8-210ENST00000636605 TRIM46Q7Z4K8 759 aa9.18□□□□□ -0.94
CLN8-210ENST00000636605 NUTM2AQ8IVF1 878 aaPredicted RBP9.18□□□□□ -0.94
CLN8-210ENST00000636605 KIFC2Q96AC6 838 aa9.18□□□□□ -0.94
CLN8-210ENST00000636605 CDK15Q96Q40 435 aa9.18□□□□□ -0.94
CLN8-210ENST00000636605 KDM4CQ9H3R0 1056 aa9.18□□□□□ -0.94
CLN8-210ENST00000636605 GOLGA3Q08378 1498 aa9.17□□□□□ -0.94
CLN8-210ENST00000636605 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
CLN8-210ENST00000636605 NFX1Q12986 1120 aaKnown RBP9.17□□□□□ -0.94
CLN8-210ENST00000636605 NNTQ13423 1086 aa9.17□□□□□ -0.94
CLN8-210ENST00000636605 SH3D19Q5HYK7 790 aa9.17□□□□□ -0.94
CLN8-210ENST00000636605 HELBQ8NG08 1087 aaPredicted RBP9.17□□□□□ -0.94
CLN8-210ENST00000636605 FAM174AQ8TBP5 190 aa9.17□□□□□ -0.94
CLN8-210ENST00000636605 GPBP1L1Q9HC44 474 aaPredicted RBP9.17□□□□□ -0.94
CLN8-210ENST00000636605 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
CLN8-210ENST00000636605 ADH1CP00326 375 aa9.16□□□□□ -0.94
CLN8-210ENST00000636605 BMP1P13497 986 aa9.16□□□□□ -0.94
CLN8-210ENST00000636605 FBXO31Q5XUX0 539 aaPredicted RBP9.16□□□□□ -0.94
CLN8-210ENST00000636605 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
CLN8-210ENST00000636605 C1QTNF2Q9BXJ5 285 aa9.16□□□□□ -0.94
CLN8-210ENST00000636605 KLF16Q9BXK1 252 aaPredicted RBP9.16□□□□□ -0.94
CLN8-210ENST00000636605 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
CLN8-210ENST00000636605 TNIKQ9UKE5 1360 aa9.15□□□□□ -0.94
CLN8-210ENST00000636605 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.15□□□□□ -0.94
CLN8-210ENST00000636605 UGGT2Q9NYU1 1516 aa9.15□□□□□ -0.95
CLN8-210ENST00000636605 PTPRGP23470 1445 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 CTTNBP2Q8WZ74 1663 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 KIF21BO75037 1637 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 TIMP2P16035 220 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 SKIV2LQ15477 1246 aaKnown RBP9.14□□□□□ -0.95
CLN8-210ENST00000636605 SH3BP5LQ7L8J4 393 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 BPHLQ86WA6 291 aaPredicted RBP9.14□□□□□ -0.95
CLN8-210ENST00000636605 ARMC2Q8NEN0 867 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 TSC1Q92574 1164 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
CLN8-210ENST00000636605 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
CLN8-210ENST00000636605 DDRGK1Q96HY6 314 aa9.13□□□□□ -0.95
CLN8-210ENST00000636605 ERCC6L2Q5T890 1561 aa9.12□□□□□ -0.95
CLN8-210ENST00000636605 WFS1O76024 890 aa9.12□□□□□ -0.95
CLN8-210ENST00000636605 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
CLN8-210ENST00000636605 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
CLN8-210ENST00000636605 PPP2R2DQ66LE6 453 aa9.12□□□□□ -0.95
CLN8-210ENST00000636605 NR3C2P08235 984 aa9.11□□□□□ -0.95
CLN8-210ENST00000636605 GRM5P41594 1212 aa9.11□□□□□ -0.95
CLN8-210ENST00000636605 TRMT44Q8IYL2 757 aaKnown RBP9.11□□□□□ -0.95
CLN8-210ENST00000636605 GPKOWQ92917 476 aaPredicted RBP eCLIP9.11□□□□□ -0.95
CLN8-210ENST00000636605 CTDSPL2Q05D32 466 aa9.1□□□□□ -0.95
CLN8-210ENST00000636605 MAP4K5Q9Y4K4 846 aa9.1□□□□□ -0.95
CLN8-210ENST00000636605 DISP1Q96F81 1524 aa9.1□□□□□ -0.95
CLN8-210ENST00000636605 TERTO14746 1132 aaKnown RBP9.09□□□□□ -0.95
CLN8-210ENST00000636605 WDR4P57081 412 aaKnown RBP9.09□□□□□ -0.95
CLN8-210ENST00000636605 NR5A1Q13285 461 aa9.09□□□□□ -0.95
CLN8-210ENST00000636605 PROCA1Q8NCQ7 364 aaPredicted RBP9.09□□□□□ -0.95
CLN8-210ENST00000636605 KIAA0556O60303 1618 aa9.09□□□□□ -0.95
CLN8-210ENST00000636605 WIPF1O43516 503 aa9.08□□□□□ -0.96
CLN8-210ENST00000636605 UACAQ9BZF9 1416 aa9.07□□□□□ -0.96
CLN8-210ENST00000636605 AGERQ15109 404 aa9.07□□□□□ -0.96
CLN8-210ENST00000636605 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
CLN8-210ENST00000636605 LRRN4Q8WUT4 740 aa9.07□□□□□ -0.96
CLN8-210ENST00000636605 ZFP42Q96MM3 310 aa9.07□□□□□ -0.96
CLN8-210ENST00000636605 UHRF1BP1LA0JNW5 1464 aa9.07□□□□□ -0.96
CLN8-210ENST00000636605 ITPKCQ96DU7 683 aa9.06□□□□□ -0.96
CLN8-210ENST00000636605 TTBK1Q5TCY1 1321 aaPredicted RBP9.05□□□□□ -0.96
CLN8-210ENST00000636605 EFCAB5A4FU69 1503 aa9.05□□□□□ -0.96
CLN8-210ENST00000636605 ARID5BQ14865 1188 aa9.05□□□□□ -0.96
CLN8-210ENST00000636605 ZFAND3Q9H8U3 227 aa9.05□□□□□ -0.96
CLN8-210ENST00000636605 ZC3H4Q9UPT8 1303 aaKnown RBP9.05□□□□□ -0.96
CLN8-210ENST00000636605 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
CLN8-210ENST00000636605 FSHRP23945 695 aa9.04□□□□□ -0.96
CLN8-210ENST00000636605 ERFEQ4G0M1 354 aa9.04□□□□□ -0.96
CLN8-210ENST00000636605 PDXDC2PQ6P474 469 aa9.04□□□□□ -0.96
CLN8-210ENST00000636605 NPAS3Q8IXF0 933 aa9.04□□□□□ -0.96
CLN8-210ENST00000636605 FKBPLQ9UIM3 349 aa9.04□□□□□ -0.96
CLN8-210ENST00000636605 MAPKBP1O60336 1514 aa9.04□□□□□ -0.96
CLN8-210ENST00000636605 ABCC2Q92887 1545 aa9.04□□□□□ -0.96
CLN8-210ENST00000636605 OCSTAMPQ9BR26 566 aa9.03□□□□□ -0.96
CLN8-210ENST00000636605 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
CLN8-210ENST00000636605 NXF1Q9UBU9 619 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms