RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 SLIT2O94813 1529 aa21.05■□□□□ 0.96
CTSD-207ENST00000636571 AMPHP49418 695 aa21.05■□□□□ 0.96
CTSD-207ENST00000636571 NRAPQ86VF7 1730 aa21.05■□□□□ 0.96
CTSD-207ENST00000636571 ANP32CO43423 234 aa21.03■□□□□ 0.96
CTSD-207ENST00000636571 HOXC9P31274 260 aa21.03■□□□□ 0.96
CTSD-207ENST00000636571 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
CTSD-207ENST00000636571 BCL9LQ86UU0 1499 aa21.03■□□□□ 0.96
CTSD-207ENST00000636571 PPP2R1AP30153 589 aa21.02■□□□□ 0.96
CTSD-207ENST00000636571 FNBP4Q8N3X1 1017 aaPredicted RBP21.02■□□□□ 0.96
CTSD-207ENST00000636571 PRKRIP1Q9H875 184 aaPredicted RBP21.02■□□□□ 0.96
CTSD-207ENST00000636571 NWD2Q9ULI1 1742 aa21.02■□□□□ 0.96
CTSD-207ENST00000636571 MTHFSP49914 203 aa21.02■□□□□ 0.96
CTSD-207ENST00000636571 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
CTSD-207ENST00000636571 IP6K1Q92551 441 aa21.01■□□□□ 0.95
CTSD-207ENST00000636571 LTV1Q96GA3 475 aaPredicted RBP21.01■□□□□ 0.95
CTSD-207ENST00000636571 RGS17Q9UGC6 210 aaPredicted RBP21.01■□□□□ 0.95
CTSD-207ENST00000636571 SMG6Q86US8 1419 aaKnown RBP21.01■□□□□ 0.95
CTSD-207ENST00000636571 COL5A2P05997 1499 aaPredicted RBP21.01■□□□□ 0.95
CTSD-207ENST00000636571 USP21Q9UK80 565 aa21■□□□□ 0.95
CTSD-207ENST00000636571 RGPD2P0DJD1 1756 aa21■□□□□ 0.95
CTSD-207ENST00000636571 FLT4P35916 1363 aa20.99■□□□□ 0.95
CTSD-207ENST00000636571 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
CTSD-207ENST00000636571 RALBP1Q15311 655 aa20.98■□□□□ 0.95
CTSD-207ENST00000636571 ABCC6O95255 1503 aa20.98■□□□□ 0.95
CTSD-207ENST00000636571 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
CTSD-207ENST00000636571 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
CTSD-207ENST00000636571 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.97■□□□□ 0.95
CTSD-207ENST00000636571 ANKRD24Q8TF21 1146 aa20.97■□□□□ 0.95
CTSD-207ENST00000636571 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
CTSD-207ENST00000636571 ERBB3P21860 1342 aa20.96■□□□□ 0.95
CTSD-207ENST00000636571 CDK12Q9NYV4 1490 aaPredicted RBP20.96■□□□□ 0.95
CTSD-207ENST00000636571 EVA1CP58658 441 aa20.96■□□□□ 0.95
CTSD-207ENST00000636571 BLMP54132 1417 aaPredicted RBP20.96■□□□□ 0.95
CTSD-207ENST00000636571 INSRP06213 1382 aa20.95■□□□□ 0.95
CTSD-207ENST00000636571 MYBBP1AQ9BQG0 1328 aaKnown RBP20.94■□□□□ 0.94
CTSD-207ENST00000636571 KIF24Q5T7B8 1368 aa20.94■□□□□ 0.94
CTSD-207ENST00000636571 CSB-PGBD3P0DP91 1061 aa20.93■□□□□ 0.94
CTSD-207ENST00000636571 USP35Q9P2H5 1018 aa20.93■□□□□ 0.94
CTSD-207ENST00000636571 COL3A1P02461 1466 aaPredicted RBP20.93■□□□□ 0.94
CTSD-207ENST00000636571 EIF4A2Q14240 407 aaKnown RBP20.92■□□□□ 0.94
CTSD-207ENST00000636571 WDR17Q8IZU2 1322 aa20.92■□□□□ 0.94
CTSD-207ENST00000636571 ATRNO75882 1429 aa20.92■□□□□ 0.94
CTSD-207ENST00000636571 POTEAQ6S8J7 498 aa20.92■□□□□ 0.94
CTSD-207ENST00000636571 CCDC184Q52MB2 194 aa20.91■□□□□ 0.94
CTSD-207ENST00000636571 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
CTSD-207ENST00000636571 CCDC9Q9Y3X0 531 aaKnown RBP20.91■□□□□ 0.94
CTSD-207ENST00000636571 TOM1L2Q6ZVM7 507 aa20.9■□□□□ 0.94
CTSD-207ENST00000636571 USHBP1Q8N6Y0 703 aa20.9■□□□□ 0.94
CTSD-207ENST00000636571 GLI3P10071 1580 aa20.9■□□□□ 0.94
CTSD-207ENST00000636571 VPS72Q15906 364 aa20.9■□□□□ 0.94
CTSD-207ENST00000636571 NBPF6Q5VWK0 638 aa20.9■□□□□ 0.94
CTSD-207ENST00000636571 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
CTSD-207ENST00000636571 NBPF4Q96M43 638 aa20.9■□□□□ 0.94
CTSD-207ENST00000636571 NLRP2Q9NX02 1062 aa20.9■□□□□ 0.94
CTSD-207ENST00000636571 TRPC5Q9UL62 973 aaPredicted RBP20.89■□□□□ 0.93
CTSD-207ENST00000636571 CRB1P82279 1406 aa20.89■□□□□ 0.93
CTSD-207ENST00000636571 IL13P35225 146 aa20.88■□□□□ 0.93
CTSD-207ENST00000636571 SPATA31A5Q5VU36 1347 aa20.88■□□□□ 0.93
CTSD-207ENST00000636571 SPATA31A7Q8IWB4 1347 aa20.88■□□□□ 0.93
CTSD-207ENST00000636571 FAM208AQ9UK61 1670 aaKnown RBP20.88■□□□□ 0.93
CTSD-207ENST00000636571 SPATA31A1Q5TZJ5 1347 aa20.87■□□□□ 0.93
CTSD-207ENST00000636571 EYA1Q99502 592 aa20.87■□□□□ 0.93
CTSD-207ENST00000636571 GJD4Q96KN9 370 aaPredicted RBP20.86■□□□□ 0.93
CTSD-207ENST00000636571 RGPD1P0DJD0 1748 aa20.85■□□□□ 0.93
CTSD-207ENST00000636571 DIAPH1O60610 1272 aaKnown RBP20.85■□□□□ 0.93
CTSD-207ENST00000636571 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
CTSD-207ENST00000636571 CARD10Q9BWT7 1032 aa20.84■□□□□ 0.93
CTSD-207ENST00000636571 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.93
CTSD-207ENST00000636571 FAM98CQ17RN3 349 aaKnown RBP20.82■□□□□ 0.92
CTSD-207ENST00000636571 AEBP1Q8IUX7 1158 aa20.82■□□□□ 0.92
CTSD-207ENST00000636571 U2SURPO15042 1029 aaKnown RBP20.82■□□□□ 0.92
CTSD-207ENST00000636571 TCP11L2Q8N4U5 519 aa20.82■□□□□ 0.92
CTSD-207ENST00000636571 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
CTSD-207ENST00000636571 HMOX1P09601 288 aa20.8■□□□□ 0.92
CTSD-207ENST00000636571 RBM6P78332 1123 aaKnown RBP20.8■□□□□ 0.92
CTSD-207ENST00000636571 NCAPD2Q15021 1401 aa20.79■□□□□ 0.92
CTSD-207ENST00000636571 RXRBP28702 533 aa20.79■□□□□ 0.92
CTSD-207ENST00000636571 MEGF6O75095 1541 aa20.79■□□□□ 0.92
CTSD-207ENST00000636571 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
CTSD-207ENST00000636571 MRS2Q9HD23 443 aa20.77■□□□□ 0.92
CTSD-207ENST00000636571 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.91
CTSD-207ENST00000636571 CCER2I3L3R5 266 aa20.77■□□□□ 0.91
CTSD-207ENST00000636571 DISP2A7MBM2 1401 aa20.77■□□□□ 0.91
CTSD-207ENST00000636571 A0A0G2JS52 829 aa20.76■□□□□ 0.91
CTSD-207ENST00000636571 MYT1Q01538 1121 aa20.76■□□□□ 0.91
CTSD-207ENST00000636571 RGS12O14924 1447 aa20.75■□□□□ 0.91
CTSD-207ENST00000636571 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
CTSD-207ENST00000636571 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.91
CTSD-207ENST00000636571 BARGINQ6ZT62 677 aa20.75■□□□□ 0.91
CTSD-207ENST00000636571 THRAP3Q9Y2W1 955 aaKnown RBP20.75■□□□□ 0.91
CTSD-207ENST00000636571 BRWD3Q6RI45 1802 aa20.75■□□□□ 0.91
CTSD-207ENST00000636571 LRRC37A3O60309 1634 aa20.75■□□□□ 0.91
CTSD-207ENST00000636571 IL2RBP14784 551 aa20.74■□□□□ 0.91
CTSD-207ENST00000636571 NUDCQ9Y266 331 aa20.74■□□□□ 0.91
CTSD-207ENST00000636571 KDRP35968 1356 aa20.73■□□□□ 0.91
CTSD-207ENST00000636571 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
CTSD-207ENST00000636571 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
CTSD-207ENST00000636571 EP400Q96L91 3159 aa20.73■□□□□ 0.91
CTSD-207ENST00000636571 ONECUT3O60422 494 aaPredicted RBP20.72■□□□□ 0.91
CTSD-207ENST00000636571 SHANK3Q9BYB0 1731 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms