RNA–Protein interactions for RNA: ENST00000636501.1

SMARCA2-251, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-251ENST00000636501 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-251ENST00000636501 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-251ENST00000636501 KCNH5Q8NCM2 988 aa11.79□□□□□ -0.52
SMARCA2-251ENST00000636501 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
SMARCA2-251ENST00000636501 CC2D1BQ5T0F9 858 aaKnown RBP11.78□□□□□ -0.52
SMARCA2-251ENST00000636501 STRN4Q9NRL3 753 aa11.78□□□□□ -0.52
SMARCA2-251ENST00000636501 EMILIN1Q9Y6C2 1016 aa11.78□□□□□ -0.52
SMARCA2-251ENST00000636501 TNNT2P45379 298 aaPredicted RBP11.77□□□□□ -0.53
SMARCA2-251ENST00000636501 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
SMARCA2-251ENST00000636501 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
SMARCA2-251ENST00000636501 TRPC5Q9UL62 973 aaPredicted RBP11.77□□□□□ -0.53
SMARCA2-251ENST00000636501 KNSTRNQ9Y448 316 aa11.77□□□□□ -0.53
SMARCA2-251ENST00000636501 RGS12O14924 1447 aa11.77□□□□□ -0.53
SMARCA2-251ENST00000636501 BRWD3Q6RI45 1802 aa11.76□□□□□ -0.53
SMARCA2-251ENST00000636501 VPS72Q15906 364 aa11.76□□□□□ -0.53
SMARCA2-251ENST00000636501 WNK3Q9BYP7 1800 aa11.75□□□□□ -0.53
SMARCA2-251ENST00000636501 HOXC9P31274 260 aa11.75□□□□□ -0.53
SMARCA2-251ENST00000636501 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
SMARCA2-251ENST00000636501 POLKQ9UBT6 870 aa11.75□□□□□ -0.53
SMARCA2-251ENST00000636501 SPATA31A5Q5VU36 1347 aa11.75□□□□□ -0.53
SMARCA2-251ENST00000636501 SPATA31A7Q8IWB4 1347 aa11.75□□□□□ -0.53
SMARCA2-251ENST00000636501 ABCC6O95255 1503 aa11.75□□□□□ -0.53
SMARCA2-251ENST00000636501 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-251ENST00000636501 RXRBP28702 533 aa11.74□□□□□ -0.53
SMARCA2-251ENST00000636501 RBM6P78332 1123 aaKnown RBP11.74□□□□□ -0.53
SMARCA2-251ENST00000636501 IP6K1Q92551 441 aa11.74□□□□□ -0.53
SMARCA2-251ENST00000636501 NSD2O96028 1365 aa11.74□□□□□ -0.53
SMARCA2-251ENST00000636501 ERBB3P21860 1342 aa11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 HSP90AB2PQ58FF8 381 aa11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 MORC1Q86VD1 984 aa11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 FAM208AQ9UK61 1670 aaKnown RBP11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 THSD7AQ9UPZ6 1657 aa11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 CCDC9Q9Y3X0 531 aaKnown RBP11.73□□□□□ -0.53
SMARCA2-251ENST00000636501 SMG6Q86US8 1419 aaKnown RBP11.72□□□□□ -0.53
SMARCA2-251ENST00000636501 NPC1L1Q9UHC9 1359 aa11.72□□□□□ -0.53
SMARCA2-251ENST00000636501 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
SMARCA2-251ENST00000636501 AMPHP49418 695 aa11.72□□□□□ -0.53
SMARCA2-251ENST00000636501 EVA1CP58658 441 aa11.72□□□□□ -0.53
SMARCA2-251ENST00000636501 ANKRD24Q8TF21 1146 aa11.72□□□□□ -0.53
SMARCA2-251ENST00000636501 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
SMARCA2-251ENST00000636501 CRB1P82279 1406 aa11.71□□□□□ -0.53
SMARCA2-251ENST00000636501 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.53
SMARCA2-251ENST00000636501 CDK12Q9NYV4 1490 aaPredicted RBP11.7□□□□□ -0.54
SMARCA2-251ENST00000636501 RTL1A6NKG5 1358 aa11.7□□□□□ -0.54
SMARCA2-251ENST00000636501 FLT4P35916 1363 aa11.7□□□□□ -0.54
SMARCA2-251ENST00000636501 PPM1GO15355 546 aaPredicted RBP11.7□□□□□ -0.54
SMARCA2-251ENST00000636501 TOM1L2Q6ZVM7 507 aa11.7□□□□□ -0.54
SMARCA2-251ENST00000636501 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
SMARCA2-251ENST00000636501 INSRP06213 1382 aa11.69□□□□□ -0.54
SMARCA2-251ENST00000636501 LRRC37A3O60309 1634 aa11.69□□□□□ -0.54
SMARCA2-251ENST00000636501 CSB-PGBD3P0DP91 1061 aa11.69□□□□□ -0.54
SMARCA2-251ENST00000636501 SEPT12Q8IYM1 358 aa11.69□□□□□ -0.54
SMARCA2-251ENST00000636501 USHBP1Q8N6Y0 703 aa11.69□□□□□ -0.54
SMARCA2-251ENST00000636501 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
SMARCA2-251ENST00000636501 ONECUT3O60422 494 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-251ENST00000636501 NBPF6Q5VWK0 638 aa11.68□□□□□ -0.54
SMARCA2-251ENST00000636501 NBPF4Q96M43 638 aa11.68□□□□□ -0.54
SMARCA2-251ENST00000636501 CARD10Q9BWT7 1032 aa11.68□□□□□ -0.54
SMARCA2-251ENST00000636501 COL3A1P02461 1466 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-251ENST00000636501 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
SMARCA2-251ENST00000636501 SHANK3Q9BYB0 1731 aa11.67□□□□□ -0.54
SMARCA2-251ENST00000636501 MTHFSP49914 203 aa11.67□□□□□ -0.54
SMARCA2-251ENST00000636501 EIF4A2Q14240 407 aaKnown RBP11.67□□□□□ -0.54
SMARCA2-251ENST00000636501 TCP11L2Q8N4U5 519 aa11.67□□□□□ -0.54
SMARCA2-251ENST00000636501 NLRP2Q9NX02 1062 aa11.67□□□□□ -0.54
SMARCA2-251ENST00000636501 PARD3Q8TEW0 1356 aa11.67□□□□□ -0.54
SMARCA2-251ENST00000636501 RGPD1P0DJD0 1748 aa11.66□□□□□ -0.54
SMARCA2-251ENST00000636501 PPP2R1AP30153 589 aa11.66□□□□□ -0.54
SMARCA2-251ENST00000636501 FAM182BQ5T319 152 aa11.66□□□□□ -0.54
SMARCA2-251ENST00000636501 BARGINQ6ZT62 677 aa11.66□□□□□ -0.54
SMARCA2-251ENST00000636501 MEGF6O75095 1541 aa11.65□□□□□ -0.54
SMARCA2-251ENST00000636501 EYA1Q99502 592 aa11.65□□□□□ -0.54
SMARCA2-251ENST00000636501 NCAPD2Q15021 1401 aa11.65□□□□□ -0.54
SMARCA2-251ENST00000636501 A0A0G2JS52 829 aa11.64□□□□□ -0.55
SMARCA2-251ENST00000636501 MYT1Q01538 1121 aa11.64□□□□□ -0.55
SMARCA2-251ENST00000636501 IL13P35225 146 aa11.63□□□□□ -0.55
SMARCA2-251ENST00000636501 THRAP3Q9Y2W1 955 aaKnown RBP11.63□□□□□ -0.55
SMARCA2-251ENST00000636501 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
SMARCA2-251ENST00000636501 IGSF1Q8N6C5 1336 aa11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 SBF2Q86WG5 1849 aa11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 IL2RBP14784 551 aa11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 KRT27Q7Z3Y8 459 aa11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 MARCH10Q8NA82 808 aaPredicted RBP11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 PRKRIP1Q9H875 184 aaPredicted RBP11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 TNS2Q63HR2 1409 aa11.6□□□□□ -0.55
SMARCA2-251ENST00000636501 OVOS2A0A0G2JMS6 1433 aa11.59□□□□□ -0.55
SMARCA2-251ENST00000636501 DDB1Q16531 1140 aa11.58□□□□□ -0.56
SMARCA2-251ENST00000636501 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
SMARCA2-251ENST00000636501 PTF1AQ7RTS3 328 aa11.58□□□□□ -0.56
SMARCA2-251ENST00000636501 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
SMARCA2-251ENST00000636501 DIAPH1O60610 1272 aaKnown RBP11.57□□□□□ -0.56
SMARCA2-251ENST00000636501 HMOX1P09601 288 aa11.57□□□□□ -0.56
SMARCA2-251ENST00000636501 RALBP1Q15311 655 aa11.57□□□□□ -0.56
SMARCA2-251ENST00000636501 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMARCA2-251ENST00000636501 TOGARAM1Q9Y4F4 1720 aa11.57□□□□□ -0.56
SMARCA2-251ENST00000636501 KDRP35968 1356 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms