RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	RGPD5	Q99666	1765 aa		10.4	□□□□□ -0.74
CACNA1A-222	ENST00000636022	NFAT5	O94916	1531 aa		10.4	□□□□□ -0.74
CACNA1A-222	ENST00000636022	KCNH5	Q8NCM2	988 aa		10.4	□□□□□ -0.74
CACNA1A-222	ENST00000636022	USP31	Q70CQ4	1352 aa		10.39	□□□□□ -0.75
CACNA1A-222	ENST00000636022	USP54	Q70EL1	1684 aa		10.39	□□□□□ -0.75
CACNA1A-222	ENST00000636022	ZBTB7C	A1YPR0	619 aa		10.39	□□□□□ -0.75
CACNA1A-222	ENST00000636022	TRIM37	O94972	964 aa		10.39	□□□□□ -0.75
CACNA1A-222	ENST00000636022	PDE3B	Q13370	1112 aa		10.39	□□□□□ -0.75
CACNA1A-222	ENST00000636022	PUS7	Q96PZ0	661 aa	Known RBP	10.39	□□□□□ -0.75
CACNA1A-222	ENST00000636022	CAMKK2	Q96RR4	588 aa		10.39	□□□□□ -0.75
CACNA1A-222	ENST00000636022	PEAK1	Q9H792	1746 aa		10.38	□□□□□ -0.75
CACNA1A-222	ENST00000636022	WDR17	Q8IZU2	1322 aa		10.38	□□□□□ -0.75
CACNA1A-222	ENST00000636022	EZH2	Q15910	746 aa	Known RBP	10.38	□□□□□ -0.75
CACNA1A-222	ENST00000636022	TESK2	Q96S53	571 aa		10.38	□□□□□ -0.75
CACNA1A-222	ENST00000636022	SLC12A5	Q9H2X9	1139 aa		10.38	□□□□□ -0.75
CACNA1A-222	ENST00000636022	WNK3	Q9BYP7	1800 aa		10.37	□□□□□ -0.75
CACNA1A-222	ENST00000636022	PSD	A5PKW4	1024 aa	Predicted RBP	10.37	□□□□□ -0.75
CACNA1A-222	ENST00000636022	SOX12	O15370	315 aa		10.37	□□□□□ -0.75
CACNA1A-222	ENST00000636022	TOM1L2	Q6ZVM7	507 aa		10.37	□□□□□ -0.75
CACNA1A-222	ENST00000636022	NME9	Q86XW9	330 aa		10.37	□□□□□ -0.75
CACNA1A-222	ENST00000636022	TMC1	Q8TDI8	760 aa		10.37	□□□□□ -0.75
CACNA1A-222	ENST00000636022	ABCC6	O95255	1503 aa		10.37	□□□□□ -0.75
CACNA1A-222	ENST00000636022	LRRC37A3	O60309	1634 aa		10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	LRP5	O75197	1615 aa		10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	SBF2	Q86WG5	1849 aa		10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	ST20-MTHFS	A0A0A6YYL1	179 aa		10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	APBA3	O96018	575 aa		10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	CARD10	Q9BWT7	1032 aa		10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	PARD3	Q8TEW0	1356 aa		10.36	□□□□□ -0.75
CACNA1A-222	ENST00000636022	RREB1	Q92766	1687 aa		10.35	□□□□□ -0.75
CACNA1A-222	ENST00000636022	EDC4	Q6P2E9	1401 aa	Known RBP	10.35	□□□□□ -0.75
CACNA1A-222	ENST00000636022	DDB1	Q16531	1140 aa		10.35	□□□□□ -0.75
CACNA1A-222	ENST00000636022	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.35	□□□□□ -0.75
CACNA1A-222	ENST00000636022		A0A1W2PP64	1363 aa		10.35	□□□□□ -0.75
CACNA1A-222	ENST00000636022	LTN1	O94822	1766 aa		10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	OVOS2	A0A0G2JMS6	1433 aa		10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	OVOS2	A0A0J9YW53	1432 aa		10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	OVOS2	Q6IE36	1432 aa		10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	NUP188	Q5SRE5	1749 aa		10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	C11orf95	C9JLR9	678 aa	Predicted RBP	10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	R3HDM1	Q15032	1099 aa	Known RBP	10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	MARCH10	Q8NA82	808 aa	Predicted RBP	10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	TERF2IP	Q9NYB0	399 aa		10.34	□□□□□ -0.75
CACNA1A-222	ENST00000636022	BCL9	O00512	1426 aa		10.33	□□□□□ -0.76
CACNA1A-222	ENST00000636022	SLC24A1	O60721	1099 aa		10.33	□□□□□ -0.76
CACNA1A-222	ENST00000636022	NINL	Q9Y2I6	1382 aa		10.33	□□□□□ -0.76
CACNA1A-222	ENST00000636022	CSB-PGBD3	P0DP91	1061 aa		10.32	□□□□□ -0.76
CACNA1A-222	ENST00000636022	PTF1A	Q7RTS3	328 aa		10.32	□□□□□ -0.76
CACNA1A-222	ENST00000636022	ERBB3	P21860	1342 aa		10.32	□□□□□ -0.76
CACNA1A-222	ENST00000636022	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNA1A-222	ENST00000636022	RGPD4	Q7Z3J3	1758 aa		10.31	□□□□□ -0.76
CACNA1A-222	ENST00000636022	CCDC7	Q96M83	1385 aa		10.31	□□□□□ -0.76
CACNA1A-222	ENST00000636022	PLSCR1	O15162	318 aa		10.31	□□□□□ -0.76
CACNA1A-222	ENST00000636022	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNA1A-222	ENST00000636022	USP47	Q96K76	1375 aa		10.3	□□□□□ -0.76
CACNA1A-222	ENST00000636022	EXOC5	O00471	708 aa		10.3	□□□□□ -0.76
CACNA1A-222	ENST00000636022	ANKRD24	Q8TF21	1146 aa		10.29	□□□□□ -0.76
CACNA1A-222	ENST00000636022	TIMELESS	Q9UNS1	1208 aa		10.29	□□□□□ -0.76
CACNA1A-222	ENST00000636022	TNS2	Q63HR2	1409 aa		10.29	□□□□□ -0.76
CACNA1A-222	ENST00000636022	ANKRD36B	Q8N2N9	1353 aa		10.28	□□□□□ -0.76
CACNA1A-222	ENST00000636022	UTRN	P46939	3433 aa		10.28	□□□□□ -0.76
CACNA1A-222	ENST00000636022	TMF1	P82094	1093 aa		10.28	□□□□□ -0.76
CACNA1A-222	ENST00000636022	NBPF14	Q5TI25	921 aa		10.28	□□□□□ -0.76
CACNA1A-222	ENST00000636022	PROM2	Q8N271	834 aa		10.28	□□□□□ -0.76
CACNA1A-222	ENST00000636022	IP6K1	Q92551	441 aa		10.28	□□□□□ -0.76
CACNA1A-222	ENST00000636022	NLRP2	Q9NX02	1062 aa		10.28	□□□□□ -0.76
CACNA1A-222	ENST00000636022	FBLN1	P23142	703 aa		10.27	□□□□□ -0.77
CACNA1A-222	ENST00000636022	COG3	Q96JB2	828 aa		10.27	□□□□□ -0.77
CACNA1A-222	ENST00000636022	MAP3K19	Q56UN5	1328 aa		10.27	□□□□□ -0.77
CACNA1A-222	ENST00000636022	KAT6B	Q8WYB5	2073 aa		10.26	□□□□□ -0.77
CACNA1A-222	ENST00000636022	FYB1	O15117	783 aa		10.26	□□□□□ -0.77
CACNA1A-222	ENST00000636022	NPM3	O75607	178 aa	Known RBP	10.26	□□□□□ -0.77
CACNA1A-222	ENST00000636022	IL2RB	P14784	551 aa		10.26	□□□□□ -0.77
CACNA1A-222	ENST00000636022	CLSPN	Q9HAW4	1339 aa		10.26	□□□□□ -0.77
CACNA1A-222	ENST00000636022	FAM208A	Q9UK61	1670 aa	Known RBP	10.25	□□□□□ -0.77
CACNA1A-222	ENST00000636022	KCNQ2	O43526	872 aa		10.25	□□□□□ -0.77
CACNA1A-222	ENST00000636022	HOXC9	P31274	260 aa		10.25	□□□□□ -0.77
CACNA1A-222	ENST00000636022	NHS	Q6T4R5	1651 aa		10.25	□□□□□ -0.77
CACNA1A-222	ENST00000636022	CDCA8	Q53HL2	280 aa		10.24	□□□□□ -0.77
CACNA1A-222	ENST00000636022	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.24	□□□□□ -0.77
CACNA1A-222	ENST00000636022	MYOM1	P52179	1685 aa		10.24	□□□□□ -0.77
CACNA1A-222	ENST00000636022	RGPD2	P0DJD1	1756 aa		10.24	□□□□□ -0.77
CACNA1A-222	ENST00000636022	CACNB1	Q02641	598 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	LTV1	Q96GA3	475 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	CARD14	Q9BXL6	1004 aa		10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	PCGF6	Q9BYE7	350 aa		10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	GGNBP2	Q9H3C7	697 aa		10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	CASZ1	Q86V15	1759 aa		10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	KIF20B	Q96Q89	1820 aa		10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	RTL1	A6NKG5	1358 aa		10.23	□□□□□ -0.77
CACNA1A-222	ENST00000636022	BTAF1	O14981	1849 aa		10.22	□□□□□ -0.77
CACNA1A-222	ENST00000636022	AMPH	P49418	695 aa		10.22	□□□□□ -0.77
CACNA1A-222	ENST00000636022	RRS1	Q15050	365 aa	Known RBP	10.22	□□□□□ -0.77
CACNA1A-222	ENST00000636022	TXNRD1	Q16881	649 aa		10.22	□□□□□ -0.77
CACNA1A-222	ENST00000636022	ACSBG1	Q96GR2	724 aa		10.22	□□□□□ -0.77
CACNA1A-222	ENST00000636022	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.22	□□□□□ -0.77
CACNA1A-222	ENST00000636022	GOLGB1	Q14789	3259 aa	Known RBP	10.22	□□□□□ -0.77
CACNA1A-222	ENST00000636022	SPON1	Q9HCB6	807 aa		10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms