RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TXNRD1Q16881 649 aa26.82■■□□□ 1.88
CLN6-212ENST00000636020 KDM2AQ9Y2K7 1162 aa26.82■■□□□ 1.88
CLN6-212ENST00000636020 BCL9O00512 1426 aa26.82■■□□□ 1.88
CLN6-212ENST00000636020 MARCH10Q8NA82 808 aaPredicted RBP26.81■■□□□ 1.88
CLN6-212ENST00000636020 TOPAZ1Q8N9V7 1692 aa26.8■■□□□ 1.88
CLN6-212ENST00000636020 ARHGEF28Q8N1W1 1705 aaKnown RBP26.79■■□□□ 1.88
CLN6-212ENST00000636020 AATKQ6ZMQ8 1374 aa26.77■■□□□ 1.88
CLN6-212ENST00000636020 DCAF11Q8TEB1 546 aa26.77■■□□□ 1.88
CLN6-212ENST00000636020 GOLGB1Q14789 3259 aaKnown RBP26.76■■□□□ 1.87
CLN6-212ENST00000636020 TOM1L2Q6ZVM7 507 aa26.76■■□□□ 1.87
CLN6-212ENST00000636020 ARXQ96QS3 562 aa26.76■■□□□ 1.87
CLN6-212ENST00000636020 MAP3K5Q99683 1374 aa26.75■■□□□ 1.87
CLN6-212ENST00000636020 ZBTB7CA1YPR0 619 aa26.74■■□□□ 1.87
CLN6-212ENST00000636020 STAC3Q96MF2 364 aa26.74■■□□□ 1.87
CLN6-212ENST00000636020 GIGYF1O75420 1035 aaPredicted RBP26.73■■□□□ 1.87
CLN6-212ENST00000636020 CDCA7Q9BWT1 371 aaPredicted RBP26.73■■□□□ 1.87
CLN6-212ENST00000636020 WDR17Q8IZU2 1322 aa26.69■■□□□ 1.86
CLN6-212ENST00000636020 GPR162Q16538 588 aa26.69■■□□□ 1.86
CLN6-212ENST00000636020 AXIN2Q9Y2T1 843 aa26.69■■□□□ 1.86
CLN6-212ENST00000636020 AKAP12Q02952 1782 aa26.68■■□□□ 1.86
CLN6-212ENST00000636020 BRD4O60885 1362 aaPredicted RBP26.68■■□□□ 1.86
CLN6-212ENST00000636020 WNK3Q9BYP7 1800 aa26.67■■□□□ 1.86
CLN6-212ENST00000636020 COL18A1P39060 1754 aa26.67■■□□□ 1.86
CLN6-212ENST00000636020 NLRP6P59044 892 aa26.67■■□□□ 1.86
CLN6-212ENST00000636020 SLIT3O75094 1523 aa26.65■■□□□ 1.86
CLN6-212ENST00000636020 PPIP5K1Q6PFW1 1433 aa26.65■■□□□ 1.86
CLN6-212ENST00000636020 EXOC5O00471 708 aa26.64■■□□□ 1.86
CLN6-212ENST00000636020 CARD10Q9BWT7 1032 aa26.63■■□□□ 1.85
CLN6-212ENST00000636020 SRPK2P78362 688 aaKnown RBP26.6■■□□□ 1.85
CLN6-212ENST00000636020 PAPPAQ13219 1627 aa26.58■■□□□ 1.85
CLN6-212ENST00000636020 USP6P35125 1406 aa26.58■■□□□ 1.85
CLN6-212ENST00000636020 ARHGEF25Q86VW2 580 aa26.58■■□□□ 1.85
CLN6-212ENST00000636020 ZNF827Q17R98 1081 aa26.57■■□□□ 1.84
CLN6-212ENST00000636020 CABP2Q9NPB3 220 aa26.57■■□□□ 1.84
CLN6-212ENST00000636020 CPSF1Q10570 1443 aaKnown RBP26.56■■□□□ 1.84
CLN6-212ENST00000636020 SHANK3Q9BYB0 1731 aa26.56■■□□□ 1.84
CLN6-212ENST00000636020 CSB-PGBD3P0DP91 1061 aa26.55■■□□□ 1.84
CLN6-212ENST00000636020 CABP1Q9NZU7 370 aa26.55■■□□□ 1.84
CLN6-212ENST00000636020 NHSQ6T4R5 1651 aa26.54■■□□□ 1.84
CLN6-212ENST00000636020 PELP1Q8IZL8 1130 aaKnown RBP26.54■■□□□ 1.84
CLN6-212ENST00000636020 ACSBG1Q96GR2 724 aa26.54■■□□□ 1.84
CLN6-212ENST00000636020 TNS2Q63HR2 1409 aa26.54■■□□□ 1.84
CLN6-212ENST00000636020 SLC16A10Q8TF71 515 aa26.53■■□□□ 1.84
CLN6-212ENST00000636020 KLHL34Q8N239 644 aa26.52■■□□□ 1.84
CLN6-212ENST00000636020 CCDC7Q96M83 1385 aa26.52■■□□□ 1.84
CLN6-212ENST00000636020 RGPD5Q99666 1765 aa26.52■■□□□ 1.84
CLN6-212ENST00000636020 LRRC4BQ9NT99 713 aa26.52■■□□□ 1.84
CLN6-212ENST00000636020 PIK3C2AO00443 1686 aa26.51■■□□□ 1.83
CLN6-212ENST00000636020 KCNH5Q8NCM2 988 aa26.5■■□□□ 1.83
CLN6-212ENST00000636020 POLD1P28340 1107 aa26.49■■□□□ 1.83
CLN6-212ENST00000636020 AKT1S1Q96B36 256 aa26.49■■□□□ 1.83
CLN6-212ENST00000636020 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
CLN6-212ENST00000636020 TRPM1Q7Z4N2 1603 aa26.48■■□□□ 1.83
CLN6-212ENST00000636020 NLGN2Q8NFZ4 835 aa26.48■■□□□ 1.83
CLN6-212ENST00000636020 NBPF1Q3BBV0 1214 aa26.47■■□□□ 1.83
CLN6-212ENST00000636020 CENPJQ9HC77 1338 aaPredicted RBP26.46■■□□□ 1.83
CLN6-212ENST00000636020 COL24A1Q17RW2 1714 aa26.46■■□□□ 1.83
CLN6-212ENST00000636020 KIAA1210Q9ULL0 1709 aa26.45■■□□□ 1.83
CLN6-212ENST00000636020 BTAF1O14981 1849 aa26.45■■□□□ 1.82
CLN6-212ENST00000636020 SOX12O15370 315 aa26.45■■□□□ 1.82
CLN6-212ENST00000636020 GRIN3BO60391 1043 aa26.44■■□□□ 1.82
CLN6-212ENST00000636020 YBX3P16989 372 aaKnown RBP eCLIP26.44■■□□□ 1.82
CLN6-212ENST00000636020 ABCC6O95255 1503 aa26.44■■□□□ 1.82
CLN6-212ENST00000636020 PNPLA7Q6ZV29 1317 aa26.42■■□□□ 1.82
CLN6-212ENST00000636020 TTC21BQ7Z4L5 1316 aa26.42■■□□□ 1.82
CLN6-212ENST00000636020 KAT6BQ8WYB5 2073 aa26.41■■□□□ 1.82
CLN6-212ENST00000636020 QSER1Q2KHR3 1735 aa26.41■■□□□ 1.82
CLN6-212ENST00000636020 SLC27A3Q5K4L6 730 aa26.4■■□□□ 1.82
CLN6-212ENST00000636020 QRICH2Q9H0J4 1663 aa26.4■■□□□ 1.82
CLN6-212ENST00000636020 ATP10DQ9P241 1426 aa26.39■■□□□ 1.82
CLN6-212ENST00000636020 NFAT5O94916 1531 aa26.39■■□□□ 1.82
CLN6-212ENST00000636020 ZNF692Q9BU19 519 aaPredicted RBP26.39■■□□□ 1.82
CLN6-212ENST00000636020 IL2RBP14784 551 aa26.38■■□□□ 1.81
CLN6-212ENST00000636020 HSPA6P17066 643 aa26.38■■□□□ 1.81
CLN6-212ENST00000636020 TFCP2L1Q9NZI6 479 aa26.37■■□□□ 1.81
CLN6-212ENST00000636020 NLRP2Q9NX02 1062 aa26.36■■□□□ 1.81
CLN6-212ENST00000636020 TTC21AQ8NDW8 1320 aa26.36■■□□□ 1.81
CLN6-212ENST00000636020 ERBB3P21860 1342 aa26.35■■□□□ 1.81
CLN6-212ENST00000636020 GPBP1L1Q9HC44 474 aaPredicted RBP26.34■■□□□ 1.81
CLN6-212ENST00000636020 TUBGCP6Q96RT7 1819 aa26.31■■□□□ 1.8
CLN6-212ENST00000636020 KCNQ4P56696 695 aa26.31■■□□□ 1.8
CLN6-212ENST00000636020 EVC2Q86UK5 1308 aa26.3■■□□□ 1.8
CLN6-212ENST00000636020 ADCY9O60503 1353 aa26.27■■□□□ 1.8
CLN6-212ENST00000636020 ANKRD24Q8TF21 1146 aa26.25■■□□□ 1.79
CLN6-212ENST00000636020 COL23A1Q86Y22 540 aaPredicted RBP26.24■■□□□ 1.79
CLN6-212ENST00000636020 DDX54Q8TDD1 881 aaKnown RBP26.24■■□□□ 1.79
CLN6-212ENST00000636020 ZNF526Q8TF50 670 aaPredicted RBP26.24■■□□□ 1.79
CLN6-212ENST00000636020 USP31Q70CQ4 1352 aa26.22■■□□□ 1.79
CLN6-212ENST00000636020 KTN1Q86UP2 1357 aaKnown RBP26.22■■□□□ 1.79
CLN6-212ENST00000636020 PRIM1P49642 420 aaKnown RBP26.22■■□□□ 1.79
CLN6-212ENST00000636020 CD2APQ9Y5K6 639 aa26.21■■□□□ 1.79
CLN6-212ENST00000636020 MSH5O43196 834 aa26.2■■□□□ 1.78
CLN6-212ENST00000636020 SYTL4Q96C24 671 aaPredicted RBP26.2■■□□□ 1.78
CLN6-212ENST00000636020 LY75O60449 1722 aa26.19■■□□□ 1.78
CLN6-212ENST00000636020 ANKRD36BQ8N2N9 1353 aa26.19■■□□□ 1.78
CLN6-212ENST00000636020 MSL1Q68DK7 614 aa26.18■■□□□ 1.78
CLN6-212ENST00000636020 CCNL1Q9UK58 526 aaPredicted RBP26.18■■□□□ 1.78
CLN6-212ENST00000636020 NSD2O96028 1365 aa26.18■■□□□ 1.78
CLN6-212ENST00000636020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.17■■□□□ 1.78
CLN6-212ENST00000636020 LTN1O94822 1766 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms