RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 SDF4Q9BRK5 362 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 ZNF518AQ6AHZ1 1483 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 ANKRD50Q9ULJ7 1429 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 GOLGA6L7A0A1B0GV03 622 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 MPHOSPH8Q99549 860 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 TTC39AQ5SRH9 613 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 L3MBTL2Q969R5 705 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 ZNF692Q9BU19 519 aaPredicted RBP7.51□□□□□ -1.21
GABRB3-218ENST00000635994 EHMT1Q9H9B1 1298 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 PPP1R12BO60237 982 aaPredicted RBP7.51□□□□□ -1.21
GABRB3-218ENST00000635994 CDKL5O76039 1030 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 PLCH2O75038 1416 aa7.51□□□□□ -1.21
GABRB3-218ENST00000635994 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 SLC4A3P48751 1232 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 RRBP1Q9P2E9 1410 aaKnown RBP7.5□□□□□ -1.21
GABRB3-218ENST00000635994 CABP4P57796 275 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 SLF2Q8IX21 1173 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 ATP10BO94823 1461 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 PLIN1O60240 522 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 ANKRD1Q15327 319 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 PPM1FP49593 454 aaPredicted RBP7.5□□□□□ -1.21
GABRB3-218ENST00000635994 ATP2B2Q01814 1243 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 ESCO1Q5FWF5 840 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 TOM1L2Q6ZVM7 507 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 RRP7AQ9Y3A4 280 aaKnown RBP7.5□□□□□ -1.21
GABRB3-218ENST00000635994 RIMBP3CA6NJZ7 1639 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 RIMBP3BA6NNM3 1639 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 RIMBP3Q9UFD9 1639 aa7.5□□□□□ -1.21
GABRB3-218ENST00000635994 KINO60870 393 aaKnown RBP7.49□□□□□ -1.21
GABRB3-218ENST00000635994 ZSCAN29Q8IWY8 852 aaPredicted RBP7.49□□□□□ -1.21
GABRB3-218ENST00000635994 FOXD4L1Q9NU39 408 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 SLC52A1Q9NWF4 448 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 CTNNA3Q9UI47 895 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 AIMP1Q12904 312 aaKnown RBP7.49□□□□□ -1.21
GABRB3-218ENST00000635994 GRIPAP1Q4V328 841 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 WASF1Q92558 559 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 CAMSAP2Q08AD1 1489 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 GOLGA6L10A6NI86 522 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 ZNF76P36508 570 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 FOXD4L5Q5VV16 416 aaPredicted RBP7.49□□□□□ -1.21
GABRB3-218ENST00000635994 FOXD4L4Q8WXT5 416 aaPredicted RBP7.49□□□□□ -1.21
GABRB3-218ENST00000635994 IPO9Q96P70 1041 aaKnown RBP7.49□□□□□ -1.21
GABRB3-218ENST00000635994 RAB3GAP2Q9H2M9 1393 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 ATF7IPQ6VMQ6 1270 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 ZNF592Q92610 1267 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 CCDC7Q96M83 1385 aa7.49□□□□□ -1.21
GABRB3-218ENST00000635994 EPB41L2O43491 1005 aaKnown RBP7.48□□□□□ -1.21
GABRB3-218ENST00000635994 GBP2P32456 591 aaPredicted RBP7.48□□□□□ -1.21
GABRB3-218ENST00000635994 STRN4Q9NRL3 753 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 CWC15Q9P013 229 aaKnown RBP7.48□□□□□ -1.21
GABRB3-218ENST00000635994 UHRF1BP1LA0JNW5 1464 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 IGHMBP2P38935 993 aaKnown RBP7.48□□□□□ -1.21
GABRB3-218ENST00000635994 IQCEQ6IPM2 695 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 CCDC112Q8NEF3 446 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 MAP7D2Q96T17 732 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 RTN4Q9NQC3 1192 aaKnown RBP7.48□□□□□ -1.21
GABRB3-218ENST00000635994 TIAM1Q13009 1591 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 CDC45O75419 566 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 DEF6Q9H4E7 631 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 PRDM11Q9NQV5 511 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 CNTLNQ9NXG0 1405 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 PAXIP1Q6ZW49 1069 aaPredicted RBP7.48□□□□□ -1.21
GABRB3-218ENST00000635994 FAM13BQ9NYF5 915 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 CCDC69A6NI79 296 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 SCLT1Q96NL6 688 aa7.48□□□□□ -1.21
GABRB3-218ENST00000635994 ST20-MTHFSA0A0A6YYL1 179 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 STARD3NLO95772 234 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 CCDC150Q8NCX0 1101 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 PABPN1LA6NDY0 278 aaKnown RBP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 NUTM2BA6NNL0 878 aaPredicted RBP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 NUTM2EB1AL46 878 aaPredicted RBP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 KIF20AO95235 890 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 MATR3P43243 847 aaKnown RBP eCLIP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 TRAF1Q13077 416 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 JAKMIP3Q5VZ66 844 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 NUTM2AQ8IVF1 878 aaPredicted RBP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 DRC1Q96MC2 740 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 UHRF1BP1Q6BDS2 1440 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 TNRQ92752 1358 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 ITSN2Q9NZM3 1697 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 DEKP35659 375 aaKnown RBP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 MBD3O95983 291 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 CEBPAP49715 358 aaPredicted RBP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 HSP90AA2PQ14568 343 aaPredicted RBP7.47□□□□□ -1.21
GABRB3-218ENST00000635994 STK38Q15208 465 aa7.47□□□□□ -1.21
GABRB3-218ENST00000635994 FAM135AQ9P2D6 1515 aa7.46□□□□□ -1.21
GABRB3-218ENST00000635994 STAMBPO95630 424 aa7.46□□□□□ -1.21
GABRB3-218ENST00000635994 PDILTQ8N807 584 aa7.46□□□□□ -1.21
GABRB3-218ENST00000635994 DNAJC2Q99543 621 aaKnown RBP7.46□□□□□ -1.21
GABRB3-218ENST00000635994 NEO1Q92859 1461 aa7.46□□□□□ -1.21
GABRB3-218ENST00000635994 ABCC10Q5T3U5 1492 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 TOM1O60784 492 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 CCDC91Q7Z6B0 441 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 NECTIN2Q92692 538 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 FERMT2Q96AC1 680 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 LRRC45Q96CN5 670 aa7.46□□□□□ -1.22
GABRB3-218ENST00000635994 ANKRD62A6NC57 917 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms