RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 NT5DC4Q86YG4 428 aa10.61□□□□□ -0.71
SMARCA2-243ENST00000635590 PRIMPOLQ96LW4 560 aa10.61□□□□□ -0.71
SMARCA2-243ENST00000635590 PRKAG2Q9UGJ0 569 aa10.61□□□□□ -0.71
SMARCA2-243ENST00000635590 SBNO2Q9Y2G9 1366 aa10.6□□□□□ -0.71
SMARCA2-243ENST00000635590 TLDC2A0PJX2 215 aa10.6□□□□□ -0.71
SMARCA2-243ENST00000635590 C19orf67A6NJJ6 358 aa10.6□□□□□ -0.71
SMARCA2-243ENST00000635590 SLFNL1Q499Z3 407 aa10.6□□□□□ -0.71
SMARCA2-243ENST00000635590 CHRDL2Q6WN34 429 aa10.6□□□□□ -0.71
SMARCA2-243ENST00000635590 PLPP7Q8NBV4 271 aa10.6□□□□□ -0.71
SMARCA2-243ENST00000635590 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMARCA2-243ENST00000635590 SMAPO00193 183 aa10.59□□□□□ -0.71
SMARCA2-243ENST00000635590 P4HBP07237 508 aaKnown RBP10.59□□□□□ -0.71
SMARCA2-243ENST00000635590 GTF3C2Q8WUA4 911 aaPredicted RBP10.59□□□□□ -0.71
SMARCA2-243ENST00000635590 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
SMARCA2-243ENST00000635590 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
SMARCA2-243ENST00000635590 CCDC144BQ3MJ40 725 aa10.58□□□□□ -0.72
SMARCA2-243ENST00000635590 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
SMARCA2-243ENST00000635590 PHTF2Q8N3S3 785 aa10.58□□□□□ -0.72
SMARCA2-243ENST00000635590 DKK1O94907 266 aa10.58□□□□□ -0.72
SMARCA2-243ENST00000635590 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
SMARCA2-243ENST00000635590 DNAAF2Q9NVR5 837 aaKnown RBP10.58□□□□□ -0.72
SMARCA2-243ENST00000635590 DNMT3AQ9Y6K1 912 aaPredicted RBP10.58□□□□□ -0.72
SMARCA2-243ENST00000635590 SMARCA4P51532 1647 aa10.57□□□□□ -0.72
SMARCA2-243ENST00000635590 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
SMARCA2-243ENST00000635590 FAM9AQ8IZU1 332 aaPredicted RBP10.57□□□□□ -0.72
SMARCA2-243ENST00000635590 SLC43A3Q8NBI5 491 aa10.57□□□□□ -0.72
SMARCA2-243ENST00000635590 SEPT3Q9UH03 358 aa10.57□□□□□ -0.72
SMARCA2-243ENST00000635590 FKBPLQ9UIM3 349 aa10.57□□□□□ -0.72
SMARCA2-243ENST00000635590 RAB11FIP3O75154 756 aa10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 ATP2B1P20020 1258 aa10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 GTF2F1P35269 517 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 FKBP4Q02790 459 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 FUT2Q10981 343 aa10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 EML3Q32P44 896 aa10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 IQSEC3Q9UPP2 1182 aaPredicted RBP10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 BAZ1BQ9UIG0 1483 aaKnown RBP10.56□□□□□ -0.72
SMARCA2-243ENST00000635590 TRIM6-TRIM34B2RNG4 842 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 GRIPAP1Q4V328 841 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 EGFLAMQ63HQ2 1017 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 C3orf67Q6ZVT6 689 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 PACS2Q86VP3 889 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 LARGE2Q8N3Y3 721 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 CAPN10Q9HC96 672 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 COLQQ9Y215 455 aaPredicted RBP10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 PDS5BQ9NTI5 1447 aa10.55□□□□□ -0.72
SMARCA2-243ENST00000635590 SDE2Q6IQ49 451 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 TGIF2Q9GZN2 237 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 FMNL1O95466 1100 aaPredicted RBP10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 ATP1A2P50993 1020 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 SF3B2Q13435 895 aaKnown RBP10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 SIX5Q8N196 739 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 FAM161BQ96MY7 647 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 CHIC2Q9UKJ5 165 aa10.54□□□□□ -0.72
SMARCA2-243ENST00000635590 TRAF7Q6Q0C0 670 aa10.53□□□□□ -0.72
SMARCA2-243ENST00000635590 LYPD8Q6UX82 237 aa10.53□□□□□ -0.72
SMARCA2-243ENST00000635590 RETREG3Q86VR2 466 aa10.53□□□□□ -0.72
SMARCA2-243ENST00000635590 PIF1Q9H611 641 aa10.53□□□□□ -0.72
SMARCA2-243ENST00000635590 NLRP2Q9NX02 1062 aa10.53□□□□□ -0.72
SMARCA2-243ENST00000635590 TBX22Q9Y458 520 aa10.53□□□□□ -0.72
SMARCA2-243ENST00000635590 FANCCQ00597 558 aa10.52□□□□□ -0.73
SMARCA2-243ENST00000635590 ARMC5Q96C12 935 aa10.52□□□□□ -0.73
SMARCA2-243ENST00000635590 CCSER2Q9H7U1 834 aa10.52□□□□□ -0.73
SMARCA2-243ENST00000635590 ZBTB7BO15156 539 aaPredicted RBP10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 SEC13P55735 322 aa10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 MAP7D1Q3KQU3 841 aa10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 TMC7Q7Z402 723 aa10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 MKNK1Q9BUB5 465 aa10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 SEC24BO95487 1268 aa10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 NUDT7P0C024 238 aa10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 NOD1Q9Y239 953 aa10.51□□□□□ -0.73
SMARCA2-243ENST00000635590 BAZ1AQ9NRL2 1556 aaPredicted RBP10.5□□□□□ -0.73
SMARCA2-243ENST00000635590 CAPN12Q6ZSI9 719 aa10.5□□□□□ -0.73
SMARCA2-243ENST00000635590 RNF34Q969K3 372 aa10.5□□□□□ -0.73
SMARCA2-243ENST00000635590 ACBD3Q9H3P7 528 aa10.5□□□□□ -0.73
SMARCA2-243ENST00000635590 PEG3Q9GZU2 1588 aa10.5□□□□□ -0.73
SMARCA2-243ENST00000635590 TSGA10IPQ3SY00 556 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 SWT1Q5T5J6 900 aaKnown RBP10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 SPACA7Q96KW9 195 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 METTL5Q9NRN9 209 aaKnown RBP10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 LGR5O75473 907 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 PMFBP1Q8TBY8 1022 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 ZNF592Q92610 1267 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 RBCK1Q9BYM8 510 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 BCL2L12Q9HB09 334 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 PARP2Q9UGN5 583 aa10.49□□□□□ -0.73
SMARCA2-243ENST00000635590 TNNI2P48788 182 aa10.48□□□□□ -0.73
SMARCA2-243ENST00000635590 FMR1Q06787 632 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMARCA2-243ENST00000635590 CC2D2BQ6DHV5 1058 aa10.48□□□□□ -0.73
SMARCA2-243ENST00000635590 GMLQ99445 158 aa10.48□□□□□ -0.73
SMARCA2-243ENST00000635590 PPME1Q9Y570 386 aa10.48□□□□□ -0.73
SMARCA2-243ENST00000635590 SFI1A8K8P3 1242 aa10.47□□□□□ -0.73
SMARCA2-243ENST00000635590 KHSRPQ92945 711 aaKnown RBP eCLIP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms