RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 BARGINQ6ZT62 677 aa21.74■■□□□ 1.07
LINC00339-207ENST00000634712 THRAP3Q9Y2W1 955 aaKnown RBP21.74■■□□□ 1.07
LINC00339-207ENST00000634712 BRWD3Q6RI45 1802 aa21.73■■□□□ 1.07
LINC00339-207ENST00000634712 CCDC125Q86Z20 511 aa21.73■■□□□ 1.07
LINC00339-207ENST00000634712 NFAT5O94916 1531 aa21.72■■□□□ 1.07
LINC00339-207ENST00000634712 CRB1P82279 1406 aa21.71■■□□□ 1.07
LINC00339-207ENST00000634712 FYB1O15117 783 aa21.71■■□□□ 1.07
LINC00339-207ENST00000634712 USP54Q70EL1 1684 aa21.7■■□□□ 1.07
LINC00339-207ENST00000634712 OVOS2A0A0J9YW53 1432 aa21.7■■□□□ 1.07
LINC00339-207ENST00000634712 OVOS2Q6IE36 1432 aa21.7■■□□□ 1.07
LINC00339-207ENST00000634712 WDR17Q8IZU2 1322 aa21.7■■□□□ 1.06
LINC00339-207ENST00000634712 GGNBP2Q9H3C7 697 aa21.7■■□□□ 1.06
LINC00339-207ENST00000634712 COL18A1P39060 1754 aa21.69■■□□□ 1.06
LINC00339-207ENST00000634712 PDE3BQ13370 1112 aa21.69■■□□□ 1.06
LINC00339-207ENST00000634712 SF3B2Q13435 895 aaKnown RBP21.69■■□□□ 1.06
LINC00339-207ENST00000634712 CARD14Q9BXL6 1004 aa21.68■■□□□ 1.06
LINC00339-207ENST00000634712 NSD3Q9BZ95 1437 aa21.66■■□□□ 1.06
LINC00339-207ENST00000634712 AMPHP49418 695 aa21.66■■□□□ 1.06
LINC00339-207ENST00000634712 ABCC6O95255 1503 aa21.65■■□□□ 1.06
LINC00339-207ENST00000634712 FAM182BQ5T319 152 aa21.65■■□□□ 1.06
LINC00339-207ENST00000634712 CARD10Q9BWT7 1032 aa21.65■■□□□ 1.06
LINC00339-207ENST00000634712 EP400Q96L91 3159 aa21.65■■□□□ 1.06
LINC00339-207ENST00000634712 MYOM1P52179 1685 aa21.65■■□□□ 1.06
LINC00339-207ENST00000634712 THSD7AQ9UPZ6 1657 aa21.65■■□□□ 1.06
LINC00339-207ENST00000634712 RGPD5Q99666 1765 aa21.65■■□□□ 1.06
LINC00339-207ENST00000634712 IP6K1Q92551 441 aa21.64■■□□□ 1.06
LINC00339-207ENST00000634712 LTN1O94822 1766 aa21.63■■□□□ 1.05
LINC00339-207ENST00000634712 ANKRD24Q8TF21 1146 aa21.63■■□□□ 1.05
LINC00339-207ENST00000634712 NLRP2Q9NX02 1062 aa21.63■■□□□ 1.05
LINC00339-207ENST00000634712 BLMP54132 1417 aaPredicted RBP21.63■■□□□ 1.05
LINC00339-207ENST00000634712 CGNL1Q0VF96 1302 aa21.63■■□□□ 1.05
LINC00339-207ENST00000634712 FBLN1P23142 703 aa21.62■■□□□ 1.05
LINC00339-207ENST00000634712 CDCA7Q9BWT1 371 aaPredicted RBP21.62■■□□□ 1.05
LINC00339-207ENST00000634712 C11orf95C9JLR9 678 aaPredicted RBP21.61■■□□□ 1.05
LINC00339-207ENST00000634712 FAM196AQ6ZSG2 479 aa21.61■■□□□ 1.05
LINC00339-207ENST00000634712 PANK3Q9H999 370 aa21.61■■□□□ 1.05
LINC00339-207ENST00000634712 ERBB3P21860 1342 aa21.61■■□□□ 1.05
LINC00339-207ENST00000634712 MAP3K19Q56UN5 1328 aa21.61■■□□□ 1.05
LINC00339-207ENST00000634712 DDB1Q16531 1140 aa21.61■■□□□ 1.05
LINC00339-207ENST00000634712 LTV1Q96GA3 475 aaPredicted RBP21.61■■□□□ 1.05
LINC00339-207ENST00000634712 CCDC7Q96M83 1385 aa21.6■■□□□ 1.05
LINC00339-207ENST00000634712 RRS1Q15050 365 aaKnown RBP21.6■■□□□ 1.05
LINC00339-207ENST00000634712 KIF20BQ96Q89 1820 aa21.59■■□□□ 1.05
LINC00339-207ENST00000634712 HOXC9P31274 260 aa21.59■■□□□ 1.05
LINC00339-207ENST00000634712 EXOC5O00471 708 aa21.56■■□□□ 1.04
LINC00339-207ENST00000634712 BAG6P46379 1132 aa21.56■■□□□ 1.04
LINC00339-207ENST00000634712 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
LINC00339-207ENST00000634712 PARP4Q9UKK3 1724 aaKnown RBP21.54■■□□□ 1.04
LINC00339-207ENST00000634712 TRIM37O94972 964 aa21.54■■□□□ 1.04
LINC00339-207ENST00000634712 DEFB132Q7Z7B7 95 aa21.54■■□□□ 1.04
LINC00339-207ENST00000634712 RTL1A6NKG5 1358 aa21.54■■□□□ 1.04
LINC00339-207ENST00000634712 IL2RBP14784 551 aa21.53■■□□□ 1.04
LINC00339-207ENST00000634712 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
LINC00339-207ENST00000634712 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
LINC00339-207ENST00000634712 SMG6Q86US8 1419 aaKnown RBP21.5■■□□□ 1.03
LINC00339-207ENST00000634712 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
LINC00339-207ENST00000634712 FLT4P35916 1363 aa21.5■■□□□ 1.03
LINC00339-207ENST00000634712 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
LINC00339-207ENST00000634712 HSP90AB2PQ58FF8 381 aa21.49■■□□□ 1.03
LINC00339-207ENST00000634712 EMILIN1Q9Y6C2 1016 aa21.49■■□□□ 1.03
LINC00339-207ENST00000634712 OVOS2A0A0G2JMS6 1433 aa21.49■■□□□ 1.03
LINC00339-207ENST00000634712 DISP2A7MBM2 1401 aa21.49■■□□□ 1.03
LINC00339-207ENST00000634712 APBA3O96018 575 aa21.48■■□□□ 1.03
LINC00339-207ENST00000634712 RGPD1P0DJD0 1748 aa21.48■■□□□ 1.03
LINC00339-207ENST00000634712 LRRC37A3O60309 1634 aa21.48■■□□□ 1.03
LINC00339-207ENST00000634712 MARCH10Q8NA82 808 aaPredicted RBP21.48■■□□□ 1.03
LINC00339-207ENST00000634712 WNK3Q9BYP7 1800 aa21.48■■□□□ 1.03
LINC00339-207ENST00000634712 NSD2O96028 1365 aa21.47■■□□□ 1.03
LINC00339-207ENST00000634712 INSRP06213 1382 aa21.47■■□□□ 1.03
LINC00339-207ENST00000634712 EN1Q05925 392 aaPredicted RBP21.47■■□□□ 1.03
LINC00339-207ENST00000634712 MORC1Q86VD1 984 aa21.47■■□□□ 1.03
LINC00339-207ENST00000634712 FAM208AQ9UK61 1670 aaKnown RBP21.46■■□□□ 1.03
LINC00339-207ENST00000634712 NBPF6Q5VWK0 638 aa21.45■■□□□ 1.02
LINC00339-207ENST00000634712 NBPF4Q96M43 638 aa21.45■■□□□ 1.02
LINC00339-207ENST00000634712 POLKQ9UBT6 870 aa21.44■■□□□ 1.02
LINC00339-207ENST00000634712 TNS2Q63HR2 1409 aa21.43■■□□□ 1.02
LINC00339-207ENST00000634712 WASHC2AQ641Q2 1341 aa21.42■■□□□ 1.02
LINC00339-207ENST00000634712 MAP2P11137 1827 aaKnown RBP21.42■■□□□ 1.02
LINC00339-207ENST00000634712 USHBP1Q8N6Y0 703 aa21.42■■□□□ 1.02
LINC00339-207ENST00000634712 RAPGEF4Q8WZA2 1011 aa21.42■■□□□ 1.02
LINC00339-207ENST00000634712 ANKRD26Q9UPS8 1709 aa21.41■■□□□ 1.02
LINC00339-207ENST00000634712 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
LINC00339-207ENST00000634712 PEAK1Q9H792 1746 aa21.4■■□□□ 1.02
LINC00339-207ENST00000634712 EZH2Q15910 746 aaKnown RBP21.4■■□□□ 1.02
LINC00339-207ENST00000634712 BCL11BQ9C0K0 894 aaPredicted RBP21.4■■□□□ 1.02
LINC00339-207ENST00000634712 ZCRB1Q8TBF4 217 aaKnown RBP21.39■■□□□ 1.02
LINC00339-207ENST00000634712 RGPD2P0DJD1 1756 aa21.39■■□□□ 1.01
LINC00339-207ENST00000634712 TNS1Q9HBL0 1735 aaKnown RBP21.38■■□□□ 1.01
LINC00339-207ENST00000634712 TATP17735 454 aaPredicted RBP21.38■■□□□ 1.01
LINC00339-207ENST00000634712 AMER1Q5JTC6 1135 aaPredicted RBP21.38■■□□□ 1.01
LINC00339-207ENST00000634712 CAMKK2Q96RR4 588 aa21.38■■□□□ 1.01
LINC00339-207ENST00000634712 BCL9O00512 1426 aa21.38■■□□□ 1.01
LINC00339-207ENST00000634712 PER1O15534 1290 aaPredicted RBP21.36■■□□□ 1.01
LINC00339-207ENST00000634712 PARD3Q8TEW0 1356 aa21.36■■□□□ 1.01
LINC00339-207ENST00000634712 CC2D1BQ5T0F9 858 aaKnown RBP21.36■■□□□ 1.01
LINC00339-207ENST00000634712 ACSBG1Q96GR2 724 aa21.36■■□□□ 1.01
LINC00339-207ENST00000634712 SBF2Q86WG5 1849 aa21.34■■□□□ 1.01
LINC00339-207ENST00000634712 KAT6BQ8WYB5 2073 aa21.34■■□□□ 1.01
LINC00339-207ENST00000634712 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
LINC00339-207ENST00000634712 MEGF6O75095 1541 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms