RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	NDUFV2	P19404	249 aa		10.37	□□□□□ -0.75
SMARCA2-223	ENST00000634435	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.37	□□□□□ -0.75
SMARCA2-223	ENST00000634435	QPCT	Q16769	361 aa		10.37	□□□□□ -0.75
SMARCA2-223	ENST00000634435	CSPP1	Q1MSJ5	1256 aa		10.37	□□□□□ -0.75
SMARCA2-223	ENST00000634435	RDH13	Q8NBN7	331 aa		10.37	□□□□□ -0.75
SMARCA2-223	ENST00000634435	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.37	□□□□□ -0.75
SMARCA2-223	ENST00000634435	MYO3A	Q8NEV4	1616 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	A2M	P01023	1474 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PLEKHH2	Q8IVE3	1493 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	CDC42BPA	Q5VT25	1732 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PLXNC1	O60486	1568 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	KIAA1107	Q9UPP5	1409 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	GDPD2	Q9HCC8	539 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	CCNB3	Q8WWL7	1395 aa		10.36	□□□□□ -0.75
SMARCA2-223	ENST00000634435	INO80	Q9ULG1	1556 aa	Predicted RBP	10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PTPRK	Q15262	1439 aa		10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PROX2	Q3B8N5	592 aa		10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	GGT6	Q6P531	493 aa		10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	KCNK17	Q96T54	332 aa		10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PCDHB15	Q9Y5E8	787 aa		10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	TCOF1	Q13428	1488 aa	Known RBP	10.35	□□□□□ -0.75
SMARCA2-223	ENST00000634435	ZNF142	P52746	1687 aa	Predicted RBP	10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	NUTM2E	B1AL46	878 aa	Predicted RBP	10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	AP1G2	O75843	785 aa		10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	HRC	P23327	699 aa		10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	GCGR	P47871	477 aa		10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	ZBTB3	Q9H5J0	574 aa		10.34	□□□□□ -0.75
SMARCA2-223	ENST00000634435	SMAP	O00193	183 aa		10.33	□□□□□ -0.76
SMARCA2-223	ENST00000634435	HOXA2	O43364	376 aa		10.33	□□□□□ -0.76
SMARCA2-223	ENST00000634435	LSM11	P83369	360 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
SMARCA2-223	ENST00000634435	RTL5	Q5HYW3	569 aa	Predicted RBP	10.33	□□□□□ -0.76
SMARCA2-223	ENST00000634435	MTUS2	Q5JR59	1369 aa		10.33	□□□□□ -0.76
SMARCA2-223	ENST00000634435	CLTC	Q00610	1675 aa	Known RBP	10.33	□□□□□ -0.76
SMARCA2-223	ENST00000634435	USP17L8	P0C7I0	530 aa		10.32	□□□□□ -0.76
SMARCA2-223	ENST00000634435	ZBED2	Q9BTP6	218 aa		10.32	□□□□□ -0.76
SMARCA2-223	ENST00000634435	KIAA1468	Q9P260	1216 aa		10.32	□□□□□ -0.76
SMARCA2-223	ENST00000634435	A2ML1	A8K2U0	1454 aa		10.31	□□□□□ -0.76
SMARCA2-223	ENST00000634435	FDX1	P10109	184 aa		10.31	□□□□□ -0.76
SMARCA2-223	ENST00000634435	ABL2	P42684	1182 aa		10.3	□□□□□ -0.76
SMARCA2-223	ENST00000634435	CABLES1	Q8TDN4	633 aa		10.3	□□□□□ -0.76
SMARCA2-223	ENST00000634435	TNR	Q92752	1358 aa		10.29	□□□□□ -0.76
SMARCA2-223	ENST00000634435	RABGEF1	Q9UJ41	708 aa		10.29	□□□□□ -0.76
SMARCA2-223	ENST00000634435	TBC1D2B	Q9UPU7	963 aa		10.29	□□□□□ -0.76
SMARCA2-223	ENST00000634435	ZNF644	Q9H582	1327 aa	Predicted RBP	10.29	□□□□□ -0.76
SMARCA2-223	ENST00000634435	ZBTB7C	A1YPR0	619 aa		10.28	□□□□□ -0.76
SMARCA2-223	ENST00000634435	PIP4K2B	P78356	416 aa		10.28	□□□□□ -0.76
SMARCA2-223	ENST00000634435	SLC4A5	Q9BY07	1137 aa		10.28	□□□□□ -0.76
SMARCA2-223	ENST00000634435	NDUFB9	Q9Y6M9	179 aa		10.28	□□□□□ -0.76
SMARCA2-223	ENST00000634435	TIAM1	Q13009	1591 aa		10.27	□□□□□ -0.76
SMARCA2-223	ENST00000634435	SLC10A3	P09131	477 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	HSPA1L	P34931	641 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	SLC4A3	P48751	1232 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	SWT1	Q5T5J6	900 aa	Known RBP	10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	CALR3	Q96L12	384 aa	Known RBP	10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	TRAIP	Q9BWF2	469 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	MBD5	Q9P267	1494 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	ADGB	Q8N7X0	1667 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	CPS1	P31327	1500 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	EHBP1L1	Q8N3D4	1523 aa		10.27	□□□□□ -0.77
SMARCA2-223	ENST00000634435	DHX29	Q7Z478	1369 aa	Known RBP	10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	DNMT1	P26358	1616 aa	Known RBP	10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	PZP	P20742	1482 aa		10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	TOM1	O60784	492 aa		10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	HDGF	P51858	240 aa	Known RBP	10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	GJD4	Q96KN9	370 aa	Predicted RBP	10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	KDM5D	Q9BY66	1539 aa		10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	MED1	Q15648	1581 aa	Predicted RBP	10.26	□□□□□ -0.77
SMARCA2-223	ENST00000634435	CCDC141	Q6ZP82	1450 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	KIF3B	O15066	747 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	PBX2	P40425	430 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	MTMR2	Q13614	643 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	GRIPAP1	Q4V328	841 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	GLMN	Q92990	594 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	PCDHGC3	Q9UN70	934 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	NEURL4	Q96JN8	1562 aa		10.25	□□□□□ -0.77
SMARCA2-223	ENST00000634435	CEP162	Q5TB80	1403 aa		10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	SHANK2	Q9UPX8	1470 aa		10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	FAM135A	Q9P2D6	1515 aa		10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	ARHGAP33	O14559	1287 aa		10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	PPP1R15A	O75807	674 aa	Predicted RBP	10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	HELB	Q8NG08	1087 aa	Predicted RBP	10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	PLA2G2E	Q9NZK7	142 aa		10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	WASHC2C	Q9Y4E1	1318 aa		10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
SMARCA2-223	ENST00000634435	FAM98C	Q17RN3	349 aa	Known RBP	10.23	□□□□□ -0.77
SMARCA2-223	ENST00000634435	ANKLE2	Q86XL3	938 aa		10.23	□□□□□ -0.77
SMARCA2-223	ENST00000634435	SLF2	Q8IX21	1173 aa		10.23	□□□□□ -0.77
SMARCA2-223	ENST00000634435	NLRP1	Q9C000	1473 aa		10.23	□□□□□ -0.77
SMARCA2-223	ENST00000634435	POM121C	A8CG34	1229 aa		10.22	□□□□□ -0.77
SMARCA2-223	ENST00000634435	PSEN2	P49810	448 aa		10.22	□□□□□ -0.77
SMARCA2-223	ENST00000634435	WASHC4	Q2M389	1173 aa		10.22	□□□□□ -0.77
SMARCA2-223	ENST00000634435	NPHP4	O75161	1426 aa	Predicted RBP	10.22	□□□□□ -0.77
SMARCA2-223	ENST00000634435	CAMSAP2	Q08AD1	1489 aa		10.22	□□□□□ -0.77

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