RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.14
SNRNP48-203ENST00000634363 PPP1R1BQ9UD71 204 aaPredicted RBP22.14■■□□□ 1.13
SNRNP48-203ENST00000634363 SBF2Q86WG5 1849 aa22.13■■□□□ 1.13
SNRNP48-203ENST00000634363 WDR17Q8IZU2 1322 aa22.13■■□□□ 1.13
SNRNP48-203ENST00000634363 COL18A1P39060 1754 aa22.13■■□□□ 1.13
SNRNP48-203ENST00000634363 KCNH5Q8NCM2 988 aa22.13■■□□□ 1.13
SNRNP48-203ENST00000634363 SPON1Q9HCB6 807 aa22.13■■□□□ 1.13
SNRNP48-203ENST00000634363 PTF1AQ7RTS3 328 aa22.12■■□□□ 1.13
SNRNP48-203ENST00000634363 ARHGEF25Q86VW2 580 aa22.12■■□□□ 1.13
SNRNP48-203ENST00000634363 LRRC37A3O60309 1634 aa22.11■■□□□ 1.13
SNRNP48-203ENST00000634363 PEAK1Q9H792 1746 aa22.11■■□□□ 1.13
SNRNP48-203ENST00000634363 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
SNRNP48-203ENST00000634363 PLSCR1O15162 318 aa22.1■■□□□ 1.13
SNRNP48-203ENST00000634363 KCNQ2O43526 872 aa22.1■■□□□ 1.13
SNRNP48-203ENST00000634363 MARCH10Q8NA82 808 aaPredicted RBP22.1■■□□□ 1.13
SNRNP48-203ENST00000634363 BCL11BQ9C0K0 894 aaPredicted RBP22.1■■□□□ 1.13
SNRNP48-203ENST00000634363 AKAP12Q02952 1782 aa22.1■■□□□ 1.13
SNRNP48-203ENST00000634363 CPSF1Q10570 1443 aaKnown RBP22.09■■□□□ 1.13
SNRNP48-203ENST00000634363 KTN1Q86UP2 1357 aaKnown RBP22.09■■□□□ 1.13
SNRNP48-203ENST00000634363 TTC21AQ8NDW8 1320 aa22.08■■□□□ 1.13
SNRNP48-203ENST00000634363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.08■■□□□ 1.13
SNRNP48-203ENST00000634363 CDCA7Q9BWT1 371 aaPredicted RBP22.08■■□□□ 1.13
SNRNP48-203ENST00000634363 EXOC5O00471 708 aa22.07■■□□□ 1.12
SNRNP48-203ENST00000634363 CARD10Q9BWT7 1032 aa22.07■■□□□ 1.12
SNRNP48-203ENST00000634363 WNK3Q9BYP7 1800 aa22.06■■□□□ 1.12
SNRNP48-203ENST00000634363 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
SNRNP48-203ENST00000634363 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
SNRNP48-203ENST00000634363 PROM2Q8N271 834 aa22.04■■□□□ 1.12
SNRNP48-203ENST00000634363 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
SNRNP48-203ENST00000634363 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
SNRNP48-203ENST00000634363 YY1P25490 414 aa22.03■■□□□ 1.12
SNRNP48-203ENST00000634363 TMC1Q8TDI8 760 aa22.03■■□□□ 1.12
SNRNP48-203ENST00000634363 PDGFDQ9GZP0 370 aaPredicted RBP22.02■■□□□ 1.12
SNRNP48-203ENST00000634363 RGPD3A6NKT7 1758 aaPredicted RBP22.02■■□□□ 1.11
SNRNP48-203ENST00000634363 RGPD4Q7Z3J3 1758 aa22.02■■□□□ 1.11
SNRNP48-203ENST00000634363 NME9Q86XW9 330 aa22■■□□□ 1.11
SNRNP48-203ENST00000634363 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
SNRNP48-203ENST00000634363 NLRP2Q9NX02 1062 aa22■■□□□ 1.11
SNRNP48-203ENST00000634363 ZBTB7AO95365 584 aa21.99■■□□□ 1.11
SNRNP48-203ENST00000634363 TXNRD1Q16881 649 aa21.99■■□□□ 1.11
SNRNP48-203ENST00000634363 NFAT5O94916 1531 aa21.99■■□□□ 1.11
SNRNP48-203ENST00000634363 CCDC7Q96M83 1385 aa21.99■■□□□ 1.11
SNRNP48-203ENST00000634363 ACSBG1Q96GR2 724 aa21.98■■□□□ 1.11
SNRNP48-203ENST00000634363 MON2Q7Z3U7 1717 aa21.97■■□□□ 1.11
SNRNP48-203ENST00000634363 KAT6BQ8WYB5 2073 aa21.97■■□□□ 1.11
SNRNP48-203ENST00000634363 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
SNRNP48-203ENST00000634363 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
SNRNP48-203ENST00000634363 ATF5Q9Y2D1 282 aaPredicted RBP21.97■■□□□ 1.11
SNRNP48-203ENST00000634363 HDGFL2Q7Z4V5 671 aaPredicted RBP21.96■■□□□ 1.11
SNRNP48-203ENST00000634363 BCL9O00512 1426 aa21.96■■□□□ 1.11
SNRNP48-203ENST00000634363 NINLQ9Y2I6 1382 aa21.95■■□□□ 1.1
SNRNP48-203ENST00000634363 LTN1O94822 1766 aa21.94■■□□□ 1.1
SNRNP48-203ENST00000634363 CASZ1Q86V15 1759 aa21.94■■□□□ 1.1
SNRNP48-203ENST00000634363 ERBB3P21860 1342 aa21.93■■□□□ 1.1
SNRNP48-203ENST00000634363 SLC15A2Q16348 729 aa21.93■■□□□ 1.1
SNRNP48-203ENST00000634363 USP31Q70CQ4 1352 aa21.93■■□□□ 1.1
SNRNP48-203ENST00000634363 IL2RBP14784 551 aa21.92■■□□□ 1.1
SNRNP48-203ENST00000634363 ANKRD24Q8TF21 1146 aa21.92■■□□□ 1.1
SNRNP48-203ENST00000634363 TNS2Q63HR2 1409 aa21.91■■□□□ 1.1
SNRNP48-203ENST00000634363 SBNO2Q9Y2G9 1366 aa21.91■■□□□ 1.1
SNRNP48-203ENST00000634363 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
SNRNP48-203ENST00000634363 CD163L1Q9NR16 1453 aa21.9■■□□□ 1.1
SNRNP48-203ENST00000634363 ABCC6O95255 1503 aa21.9■■□□□ 1.1
SNRNP48-203ENST00000634363 PTGER2P43116 358 aa21.89■■□□□ 1.09
SNRNP48-203ENST00000634363 LTV1Q96GA3 475 aaPredicted RBP21.89■■□□□ 1.09
SNRNP48-203ENST00000634363 TIMELESSQ9UNS1 1208 aa21.89■■□□□ 1.09
SNRNP48-203ENST00000634363 DDX54Q8TDD1 881 aaKnown RBP21.87■■□□□ 1.09
SNRNP48-203ENST00000634363 NHSQ6T4R5 1651 aa21.87■■□□□ 1.09
SNRNP48-203ENST00000634363 MYOM1P52179 1685 aa21.86■■□□□ 1.09
SNRNP48-203ENST00000634363 EDC4Q6P2E9 1401 aaKnown RBP21.86■■□□□ 1.09
SNRNP48-203ENST00000634363 USP54Q70EL1 1684 aa21.85■■□□□ 1.09
SNRNP48-203ENST00000634363 MTFR1LQ9H019 292 aa21.85■■□□□ 1.09
SNRNP48-203ENST00000634363 A0A1W2PP64 1363 aa21.85■■□□□ 1.09
SNRNP48-203ENST00000634363 FHDC1Q9C0D6 1143 aaPredicted RBP21.84■■□□□ 1.09
SNRNP48-203ENST00000634363 BTAF1O14981 1849 aa21.83■■□□□ 1.09
SNRNP48-203ENST00000634363 IP6K1Q92551 441 aa21.83■■□□□ 1.09
SNRNP48-203ENST00000634363 SYT17Q9BSW7 474 aa21.83■■□□□ 1.09
SNRNP48-203ENST00000634363 FBLN1P23142 703 aa21.81■■□□□ 1.08
SNRNP48-203ENST00000634363 ST20-MTHFSA0A0A6YYL1 179 aa21.8■■□□□ 1.08
SNRNP48-203ENST00000634363 AMPHP49418 695 aa21.8■■□□□ 1.08
SNRNP48-203ENST00000634363 SYTL4Q96C24 671 aaPredicted RBP21.8■■□□□ 1.08
SNRNP48-203ENST00000634363 COG3Q96JB2 828 aa21.8■■□□□ 1.08
SNRNP48-203ENST00000634363 PUS7Q96PZ0 661 aaKnown RBP21.8■■□□□ 1.08
SNRNP48-203ENST00000634363 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
SNRNP48-203ENST00000634363 ZNF827Q17R98 1081 aa21.78■■□□□ 1.08
SNRNP48-203ENST00000634363 ARXQ96QS3 562 aa21.78■■□□□ 1.08
SNRNP48-203ENST00000634363 SGIP1Q9BQI5 828 aa21.77■■□□□ 1.08
SNRNP48-203ENST00000634363 KCNQ4P56696 695 aa21.76■■□□□ 1.07
SNRNP48-203ENST00000634363 MAP3K19Q56UN5 1328 aa21.76■■□□□ 1.07
SNRNP48-203ENST00000634363 PRIM1P49642 420 aaKnown RBP21.75■■□□□ 1.07
SNRNP48-203ENST00000634363 TESK2Q96S53 571 aa21.75■■□□□ 1.07
SNRNP48-203ENST00000634363 RGPD2P0DJD1 1756 aa21.74■■□□□ 1.07
SNRNP48-203ENST00000634363 HOXC9P31274 260 aa21.74■■□□□ 1.07
SNRNP48-203ENST00000634363 KLHL34Q8N239 644 aa21.74■■□□□ 1.07
SNRNP48-203ENST00000634363 PAPPAQ13219 1627 aa21.73■■□□□ 1.07
SNRNP48-203ENST00000634363 FAM208AQ9UK61 1670 aaKnown RBP21.72■■□□□ 1.07
SNRNP48-203ENST00000634363 SLC27A3Q5K4L6 730 aa21.72■■□□□ 1.07
SNRNP48-203ENST00000634363 ZCRB1Q8TBF4 217 aaKnown RBP21.72■■□□□ 1.07
SNRNP48-203ENST00000634363 TFCP2L1Q9NZI6 479 aa21.72■■□□□ 1.07
SNRNP48-203ENST00000634363 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms