RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 SKOR1P84550 965 aa8.31□□□□□ -1.08
GPCPD1-207ENST00000633552 LIAT1Q6ZQX7 453 aa8.31□□□□□ -1.08
GPCPD1-207ENST00000633552 UCN2Q96RP3 112 aa8.31□□□□□ -1.08
GPCPD1-207ENST00000633552 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
GPCPD1-207ENST00000633552 TBC1D9Q6ZT07 1266 aa8.3□□□□□ -1.08
GPCPD1-207ENST00000633552 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
GPCPD1-207ENST00000633552 CEP126Q9P2H0 1117 aa8.3□□□□□ -1.08
GPCPD1-207ENST00000633552 ATP9BO43861 1147 aa8.29□□□□□ -1.08
GPCPD1-207ENST00000633552 PRR20EP86478 221 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 PRR20CP86479 221 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 PRR20DP86480 221 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 PRR20BP86481 221 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 PRR20AP86496 221 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 MYT1Q01538 1121 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 FOXC1Q12948 553 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 CFAP70Q5T0N1 1121 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 CDV3Q9UKY7 258 aaKnown RBP8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
GPCPD1-207ENST00000633552 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 USP17L5A8MUK1 530 aa8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 ZNF697Q5TEC3 545 aa8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 SPRYD7Q5W111 196 aa8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 DEPDC4Q8N2C3 294 aa8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 MAFBQ9Y5Q3 323 aaPredicted RBP8.27□□□□□ -1.09
GPCPD1-207ENST00000633552 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 RNF20Q5VTR2 975 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 TRMT44Q8IYL2 757 aaKnown RBP8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 PLPP7Q8NBV4 271 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 KCTD15Q96SI1 283 aaPredicted RBP8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
GPCPD1-207ENST00000633552 FSHRP23945 695 aa8.25□□□□□ -1.09
GPCPD1-207ENST00000633552 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
GPCPD1-207ENST00000633552 NFATC2IPQ8NCF5 419 aa8.25□□□□□ -1.09
GPCPD1-207ENST00000633552 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
GPCPD1-207ENST00000633552 PCDHB11Q9Y5F2 797 aa8.25□□□□□ -1.09
GPCPD1-207ENST00000633552 ACIN1Q9UKV3 1341 aaKnown RBP8.25□□□□□ -1.09
GPCPD1-207ENST00000633552 FAM187AA6NFU0 413 aa8.24□□□□□ -1.09
GPCPD1-207ENST00000633552 EML3Q32P44 896 aa8.24□□□□□ -1.09
GPCPD1-207ENST00000633552 MRGPRX2Q96LB1 330 aa8.24□□□□□ -1.09
GPCPD1-207ENST00000633552 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
GPCPD1-207ENST00000633552 WNT7AO00755 349 aa8.23□□□□□ -1.09
GPCPD1-207ENST00000633552 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
GPCPD1-207ENST00000633552 NCOA4Q13772 614 aa8.23□□□□□ -1.09
GPCPD1-207ENST00000633552 MAP7D1Q3KQU3 841 aa8.22□□□□□ -1.09
GPCPD1-207ENST00000633552 VRTNQ9H8Y1 702 aa8.22□□□□□ -1.09
GPCPD1-207ENST00000633552 ALDH1A1P00352 501 aa8.21□□□□□ -1.1
GPCPD1-207ENST00000633552 CCDC85AQ96PX6 553 aaPredicted RBP8.21□□□□□ -1.1
GPCPD1-207ENST00000633552 MAP4K5Q9Y4K4 846 aa8.21□□□□□ -1.1
GPCPD1-207ENST00000633552 WASF2Q9Y6W5 498 aa8.21□□□□□ -1.1
GPCPD1-207ENST00000633552 TNFRSF10AO00220 468 aa8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 MYCP01106 439 aaPredicted RBP8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 PSME1Q06323 249 aa8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 INTS6LQ5JSJ4 861 aaKnown RBP8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 SEPT12Q8IYM1 358 aa8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 PHTF2Q8N3S3 785 aa8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 MKRN1Q9UHC7 482 aaKnown RBP8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 NOD1Q9Y239 953 aa8.2□□□□□ -1.1
GPCPD1-207ENST00000633552 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 ESPNB1AK53 854 aa8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 ADH1CP00326 375 aa8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 TSGA10IPQ3SY00 556 aa8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 LARP1Q6PKG0 1096 aaKnown RBP8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 TREML4Q6UXN2 200 aa8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
GPCPD1-207ENST00000633552 POTECB2RU33 542 aa8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 ATP5J2-PTCD1G3V325 749 aa8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 RASA1P20936 1047 aa8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 DHX9Q08211 1270 aaKnown RBP8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 CCDC116Q8IYX3 515 aa8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 CYP4X1Q8N118 509 aa8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 SIRT1Q96EB6 747 aa8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 ZNF594Q96JF6 807 aaPredicted RBP8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 RBM19Q9Y4C8 960 aaKnown RBP8.18□□□□□ -1.1
GPCPD1-207ENST00000633552 ERVH48-1M5A8F1 160 aa8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 LZTS3O60299 673 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 GDF9O60383 454 aa8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 PDIA4P13667 645 aaKnown RBP8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 TRIM50Q86XT4 487 aa8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 CCDC125Q86Z20 511 aa8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 CYLDQ9NQC7 956 aa8.17□□□□□ -1.1
GPCPD1-207ENST00000633552 ATP1A2P50993 1020 aa8.16□□□□□ -1.1
GPCPD1-207ENST00000633552 USP4Q13107 963 aa8.16□□□□□ -1.1
GPCPD1-207ENST00000633552 NR5A1Q13285 461 aa8.16□□□□□ -1.1
GPCPD1-207ENST00000633552 TMPRSS4Q9NRS4 437 aa8.16□□□□□ -1.1
GPCPD1-207ENST00000633552 USP17L15C9J2P7 530 aa8.15□□□□□ -1.1
GPCPD1-207ENST00000633552 USP17L10C9JJH3 530 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms