RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 NME9Q86XW9 330 aa24.13■■□□□ 1.45
SPTAN1-214ENST00000628614 ABCC6O95255 1503 aa24.12■■□□□ 1.45
SPTAN1-214ENST00000628614 FAM182BQ5T319 152 aa24.12■■□□□ 1.45
SPTAN1-214ENST00000628614 ZRANB1Q9UGI0 708 aa24.12■■□□□ 1.45
SPTAN1-214ENST00000628614 DEFB132Q7Z7B7 95 aa24.11■■□□□ 1.45
SPTAN1-214ENST00000628614 AXIN2Q9Y2T1 843 aa24.11■■□□□ 1.45
SPTAN1-214ENST00000628614 WDR17Q8IZU2 1322 aa24.1■■□□□ 1.45
SPTAN1-214ENST00000628614 BAG6P46379 1132 aa24.1■■□□□ 1.45
SPTAN1-214ENST00000628614 PDE3BQ13370 1112 aa24.1■■□□□ 1.45
SPTAN1-214ENST00000628614 FAM196AQ6ZSG2 479 aa24.1■■□□□ 1.45
SPTAN1-214ENST00000628614 TOM1L2Q6ZVM7 507 aa24.1■■□□□ 1.45
SPTAN1-214ENST00000628614 RGPD1P0DJD0 1748 aa24.09■■□□□ 1.45
SPTAN1-214ENST00000628614 CDCA8Q53HL2 280 aa24.08■■□□□ 1.45
SPTAN1-214ENST00000628614 CCER1Q8TC90 406 aaPredicted RBP24.08■■□□□ 1.45
SPTAN1-214ENST00000628614 PARP4Q9UKK3 1724 aaKnown RBP24.07■■□□□ 1.44
SPTAN1-214ENST00000628614 ANKRD36BQ8N2N9 1353 aa24.07■■□□□ 1.44
SPTAN1-214ENST00000628614 OVOS2A0A0J9YW53 1432 aa24.07■■□□□ 1.44
SPTAN1-214ENST00000628614 OVOS2Q6IE36 1432 aa24.07■■□□□ 1.44
SPTAN1-214ENST00000628614 CSB-PGBD3P0DP91 1061 aa24.05■■□□□ 1.44
SPTAN1-214ENST00000628614 DISP2A7MBM2 1401 aa24.03■■□□□ 1.44
SPTAN1-214ENST00000628614 CARD10Q9BWT7 1032 aa24.03■■□□□ 1.44
SPTAN1-214ENST00000628614 TNS1Q9HBL0 1735 aaKnown RBP24.02■■□□□ 1.44
SPTAN1-214ENST00000628614 RGPD5Q99666 1765 aa24.02■■□□□ 1.44
SPTAN1-214ENST00000628614 CDCA7Q9BWT1 371 aaPredicted RBP24.02■■□□□ 1.44
SPTAN1-214ENST00000628614 C11orf95C9JLR9 678 aaPredicted RBP24.01■■□□□ 1.43
SPTAN1-214ENST00000628614 TRIM37O94972 964 aa24.01■■□□□ 1.43
SPTAN1-214ENST00000628614 LRRC37A3O60309 1634 aa24■■□□□ 1.43
SPTAN1-214ENST00000628614 DDB1Q16531 1140 aa24■■□□□ 1.43
SPTAN1-214ENST00000628614 COG3Q96JB2 828 aa24■■□□□ 1.43
SPTAN1-214ENST00000628614 LTN1O94822 1766 aa24■■□□□ 1.43
SPTAN1-214ENST00000628614 CCDC7Q96M83 1385 aa24■■□□□ 1.43
SPTAN1-214ENST00000628614 WNK3Q9BYP7 1800 aa23.99■■□□□ 1.43
SPTAN1-214ENST00000628614 EN1Q05925 392 aaPredicted RBP23.99■■□□□ 1.43
SPTAN1-214ENST00000628614 ERBB3P21860 1342 aa23.99■■□□□ 1.43
SPTAN1-214ENST00000628614 OVOS2A0A0G2JMS6 1433 aa23.98■■□□□ 1.43
SPTAN1-214ENST00000628614 SRCAPQ6ZRS2 3230 aa23.97■■□□□ 1.43
SPTAN1-214ENST00000628614 PARD3Q8TEW0 1356 aa23.94■■□□□ 1.42
SPTAN1-214ENST00000628614 APBA3O96018 575 aa23.94■■□□□ 1.42
SPTAN1-214ENST00000628614 ANKRD24Q8TF21 1146 aa23.93■■□□□ 1.42
SPTAN1-214ENST00000628614 IP6K1Q92551 441 aa23.93■■□□□ 1.42
SPTAN1-214ENST00000628614 NLRP2Q9NX02 1062 aa23.93■■□□□ 1.42
SPTAN1-214ENST00000628614 PEAK1Q9H792 1746 aa23.93■■□□□ 1.42
SPTAN1-214ENST00000628614 MYOM1P52179 1685 aa23.92■■□□□ 1.42
SPTAN1-214ENST00000628614 FYB1O15117 783 aa23.91■■□□□ 1.42
SPTAN1-214ENST00000628614 EZH2Q15910 746 aaKnown RBP23.91■■□□□ 1.42
SPTAN1-214ENST00000628614 CAMKK2Q96RR4 588 aa23.91■■□□□ 1.42
SPTAN1-214ENST00000628614 EIF4G2P78344 907 aaKnown RBP eCLIP23.9■■□□□ 1.42
SPTAN1-214ENST00000628614 TNS2Q63HR2 1409 aa23.9■■□□□ 1.42
SPTAN1-214ENST00000628614 MAP3K19Q56UN5 1328 aa23.89■■□□□ 1.42
SPTAN1-214ENST00000628614 EXOC5O00471 708 aa23.89■■□□□ 1.41
SPTAN1-214ENST00000628614 GGNBP2Q9H3C7 697 aa23.89■■□□□ 1.41
SPTAN1-214ENST00000628614 BCL9O00512 1426 aa23.89■■□□□ 1.41
SPTAN1-214ENST00000628614 AMPHP49418 695 aa23.88■■□□□ 1.41
SPTAN1-214ENST00000628614 MARCH10Q8NA82 808 aaPredicted RBP23.88■■□□□ 1.41
SPTAN1-214ENST00000628614 FAM208AQ9UK61 1670 aaKnown RBP23.87■■□□□ 1.41
SPTAN1-214ENST00000628614 RTL1A6NKG5 1358 aa23.87■■□□□ 1.41
SPTAN1-214ENST00000628614 KIF20BQ96Q89 1820 aa23.87■■□□□ 1.41
SPTAN1-214ENST00000628614 NSD3Q9BZ95 1437 aa23.86■■□□□ 1.41
SPTAN1-214ENST00000628614 IL2RBP14784 551 aa23.86■■□□□ 1.41
SPTAN1-214ENST00000628614 HOXC9P31274 260 aa23.86■■□□□ 1.41
SPTAN1-214ENST00000628614 HSPA5P11021 654 aaKnown RBP23.84■■□□□ 1.41
SPTAN1-214ENST00000628614 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
SPTAN1-214ENST00000628614 RREB1Q92766 1687 aa23.83■■□□□ 1.41
SPTAN1-214ENST00000628614 PSDA5PKW4 1024 aaPredicted RBP23.83■■□□□ 1.41
SPTAN1-214ENST00000628614 FBLN1P23142 703 aa23.83■■□□□ 1.41
SPTAN1-214ENST00000628614 LTV1Q96GA3 475 aaPredicted RBP23.83■■□□□ 1.41
SPTAN1-214ENST00000628614 BCL11BQ9C0K0 894 aaPredicted RBP23.83■■□□□ 1.41
SPTAN1-214ENST00000628614 SBF2Q86WG5 1849 aa23.82■■□□□ 1.4
SPTAN1-214ENST00000628614 RRS1Q15050 365 aaKnown RBP23.82■■□□□ 1.4
SPTAN1-214ENST00000628614 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
SPTAN1-214ENST00000628614 R3HDM1Q15032 1099 aaKnown RBP23.8■■□□□ 1.4
SPTAN1-214ENST00000628614 RGPD3A6NKT7 1758 aaPredicted RBP23.8■■□□□ 1.4
SPTAN1-214ENST00000628614 RGPD4Q7Z3J3 1758 aa23.8■■□□□ 1.4
SPTAN1-214ENST00000628614 SMG6Q86US8 1419 aaKnown RBP23.79■■□□□ 1.4
SPTAN1-214ENST00000628614 PLSCR1O15162 318 aa23.79■■□□□ 1.4
SPTAN1-214ENST00000628614 CGNL1Q0VF96 1302 aa23.79■■□□□ 1.4
SPTAN1-214ENST00000628614 NUP188Q5SRE5 1749 aa23.79■■□□□ 1.4
SPTAN1-214ENST00000628614 KIF24Q5T7B8 1368 aa23.78■■□□□ 1.4
SPTAN1-214ENST00000628614 FLT4P35916 1363 aa23.77■■□□□ 1.4
SPTAN1-214ENST00000628614 NBPF14Q5TI25 921 aa23.76■■□□□ 1.39
SPTAN1-214ENST00000628614 LRP5O75197 1615 aa23.76■■□□□ 1.39
SPTAN1-214ENST00000628614 INSRP06213 1382 aa23.75■■□□□ 1.39
SPTAN1-214ENST00000628614 PTF1AQ7RTS3 328 aa23.74■■□□□ 1.39
SPTAN1-214ENST00000628614 NHSQ6T4R5 1651 aa23.73■■□□□ 1.39
SPTAN1-214ENST00000628614 HSP90AB2PQ58FF8 381 aa23.71■■□□□ 1.39
SPTAN1-214ENST00000628614 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
SPTAN1-214ENST00000628614 ACSBG1Q96GR2 724 aa23.7■■□□□ 1.38
SPTAN1-214ENST00000628614 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
SPTAN1-214ENST00000628614 EMILIN1Q9Y6C2 1016 aa23.7■■□□□ 1.38
SPTAN1-214ENST00000628614 KCNQ2O43526 872 aa23.69■■□□□ 1.38
SPTAN1-214ENST00000628614 DDX54Q8TDD1 881 aaKnown RBP23.69■■□□□ 1.38
SPTAN1-214ENST00000628614 RGPD2P0DJD1 1756 aa23.69■■□□□ 1.38
SPTAN1-214ENST00000628614 MEGF6O75095 1541 aa23.69■■□□□ 1.38
SPTAN1-214ENST00000628614 ZCRB1Q8TBF4 217 aaKnown RBP23.67■■□□□ 1.38
SPTAN1-214ENST00000628614 PANK3Q9H999 370 aa23.67■■□□□ 1.38
SPTAN1-214ENST00000628614 ANKRD26Q9UPS8 1709 aa23.67■■□□□ 1.38
SPTAN1-214ENST00000628614 USHBP1Q8N6Y0 703 aa23.66■■□□□ 1.38
SPTAN1-214ENST00000628614 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
SPTAN1-214ENST00000628614 PPM1GO15355 546 aaPredicted RBP23.65■■□□□ 1.38
SPTAN1-214ENST00000628614 TXNRD1Q16881 649 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms