RNA–Protein interactions for RNA: ENST00000628549.1

UBE2A-207, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2 BASIC

Gene UBE2A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-207ENST00000628549 SEPT12Q8IYM1 358 aa36.26■■■■□ 3.4
UBE2A-207ENST00000628549 SPATA31A1Q5TZJ5 1347 aa36.26■■■■□ 3.39
UBE2A-207ENST00000628549 FAM98CQ17RN3 349 aaKnown RBP36.25■■■■□ 3.39
UBE2A-207ENST00000628549 LARP1Q6PKG0 1096 aaKnown RBP36.22■■■■□ 3.39
UBE2A-207ENST00000628549 NSD3Q9BZ95 1437 aa36.2■■■■□ 3.39
UBE2A-207ENST00000628549 CRB1P82279 1406 aa36.19■■■■□ 3.38
UBE2A-207ENST00000628549 USP35Q9P2H5 1018 aa36.19■■■■□ 3.38
UBE2A-207ENST00000628549 UPF1Q92900 1129 aaKnown RBP eCLIP36.18■■■■□ 3.38
UBE2A-207ENST00000628549 THSD7AQ9UPZ6 1657 aa36.18■■■■□ 3.38
UBE2A-207ENST00000628549 FYB1O15117 783 aa36.17■■■■□ 3.38
UBE2A-207ENST00000628549 TCP11L2Q8N4U5 519 aa36.16■■■■□ 3.38
UBE2A-207ENST00000628549 CARD14Q9BXL6 1004 aa36.15■■■■□ 3.38
UBE2A-207ENST00000628549 GGNBP2Q9H3C7 697 aa36.15■■■■□ 3.38
UBE2A-207ENST00000628549 AXIN2Q9Y2T1 843 aa36.15■■■■□ 3.38
UBE2A-207ENST00000628549 THRAP3Q9Y2W1 955 aaKnown RBP36.15■■■■□ 3.38
UBE2A-207ENST00000628549 WDR17Q8IZU2 1322 aa36.14■■■■□ 3.38
UBE2A-207ENST00000628549 CSB-PGBD3P0DP91 1061 aa36.14■■■■□ 3.38
UBE2A-207ENST00000628549 TOM1L2Q6ZVM7 507 aa36.14■■■■□ 3.38
UBE2A-207ENST00000628549 KRT27Q7Z3Y8 459 aa36.14■■■■□ 3.38
UBE2A-207ENST00000628549 BARGINQ6ZT62 677 aa36.13■■■■□ 3.37
UBE2A-207ENST00000628549 CGNL1Q0VF96 1302 aa36.11■■■■□ 3.37
UBE2A-207ENST00000628549 C11orf95C9JLR9 678 aaPredicted RBP36.09■■■■□ 3.37
UBE2A-207ENST00000628549 BLMP54132 1417 aaPredicted RBP36.08■■■■□ 3.37
UBE2A-207ENST00000628549 WNK3Q9BYP7 1800 aa36.06■■■■□ 3.36
UBE2A-207ENST00000628549 ANKRD26Q9UPS8 1709 aa36.06■■■■□ 3.36
UBE2A-207ENST00000628549 PANK3Q9H999 370 aa36.06■■■■□ 3.36
UBE2A-207ENST00000628549 AMPHP49418 695 aa36.05■■■■□ 3.36
UBE2A-207ENST00000628549 PARP4Q9UKK3 1724 aaKnown RBP36.05■■■■□ 3.36
UBE2A-207ENST00000628549 KIF7Q2M1P5 1343 aa36.05■■■■□ 3.36
UBE2A-207ENST00000628549 IP6K1Q92551 441 aa36.04■■■■□ 3.36
UBE2A-207ENST00000628549 FAM208AQ9UK61 1670 aaKnown RBP36.03■■■■□ 3.36
UBE2A-207ENST00000628549 ERBB3P21860 1342 aa36.03■■■■□ 3.36
UBE2A-207ENST00000628549 MAP3K19Q56UN5 1328 aa36.03■■■■□ 3.36
UBE2A-207ENST00000628549 CCDC125Q86Z20 511 aa36.02■■■■□ 3.36
UBE2A-207ENST00000628549 CARD10Q9BWT7 1032 aa36.02■■■■□ 3.36
UBE2A-207ENST00000628549 RTL1A6NKG5 1358 aa36.01■■■■□ 3.35
UBE2A-207ENST00000628549 CCDC7Q96M83 1385 aa36.01■■■■□ 3.35
UBE2A-207ENST00000628549 ANKRD24Q8TF21 1146 aa36■■■■□ 3.35
UBE2A-207ENST00000628549 PDE3BQ13370 1112 aa35.99■■■■□ 3.35
UBE2A-207ENST00000628549 CDCA7Q9BWT1 371 aaPredicted RBP35.99■■■■□ 3.35
UBE2A-207ENST00000628549 NLRP2Q9NX02 1062 aa35.97■■■■□ 3.35
UBE2A-207ENST00000628549 HOXC9P31274 260 aa35.96■■■■□ 3.35
UBE2A-207ENST00000628549 RRS1Q15050 365 aaKnown RBP35.96■■■■□ 3.35
UBE2A-207ENST00000628549 MAP2P11137 1827 aaKnown RBP35.96■■■■□ 3.35
UBE2A-207ENST00000628549 FBLN1P23142 703 aa35.95■■■■□ 3.35
UBE2A-207ENST00000628549 NSD2O96028 1365 aa35.94■■■■□ 3.34
UBE2A-207ENST00000628549 KNSTRNQ9Y448 316 aa35.94■■■■□ 3.34
UBE2A-207ENST00000628549 KIF24Q5T7B8 1368 aa35.93■■■■□ 3.34
UBE2A-207ENST00000628549 SF3B2Q13435 895 aaKnown RBP35.93■■■■□ 3.34
UBE2A-207ENST00000628549 LRRC37A3O60309 1634 aa35.93■■■■□ 3.34
UBE2A-207ENST00000628549 LTV1Q96GA3 475 aaPredicted RBP35.91■■■■□ 3.34
UBE2A-207ENST00000628549 SMG6Q86US8 1419 aaKnown RBP35.91■■■■□ 3.34
UBE2A-207ENST00000628549 DDB1Q16531 1140 aa35.9■■■■□ 3.34
UBE2A-207ENST00000628549 RGPD1P0DJD0 1748 aa35.9■■■■□ 3.34
UBE2A-207ENST00000628549 FLT4P35916 1363 aa35.89■■■■□ 3.34
UBE2A-207ENST00000628549 EP400Q96L91 3159 aa35.88■■■■□ 3.34
UBE2A-207ENST00000628549 FAM196AQ6ZSG2 479 aa35.88■■■■□ 3.33
UBE2A-207ENST00000628549 FAM182BQ5T319 152 aa35.87■■■■□ 3.33
UBE2A-207ENST00000628549 PEAK1Q9H792 1746 aa35.86■■■■□ 3.33
UBE2A-207ENST00000628549 DISP2A7MBM2 1401 aa35.85■■■■□ 3.33
UBE2A-207ENST00000628549 RGPD2P0DJD1 1756 aa35.85■■■■□ 3.33
UBE2A-207ENST00000628549 WASHC2AQ641Q2 1341 aa35.84■■■■□ 3.33
UBE2A-207ENST00000628549 INSRP06213 1382 aa35.83■■■■□ 3.33
UBE2A-207ENST00000628549 IL2RBP14784 551 aa35.82■■■■□ 3.32
UBE2A-207ENST00000628549 EXOC5O00471 708 aa35.81■■■■□ 3.32
UBE2A-207ENST00000628549 PPM1GO15355 546 aaPredicted RBP35.81■■■■□ 3.32
UBE2A-207ENST00000628549 EMILIN1Q9Y6C2 1016 aa35.81■■■■□ 3.32
UBE2A-207ENST00000628549 MORC1Q86VD1 984 aa35.8■■■■□ 3.32
UBE2A-207ENST00000628549 OVOS2A0A0G2JMS6 1433 aa35.8■■■■□ 3.32
UBE2A-207ENST00000628549 TNNT2P45379 298 aaPredicted RBP35.79■■■■□ 3.32
UBE2A-207ENST00000628549 HSP90AB2PQ58FF8 381 aa35.78■■■■□ 3.32
UBE2A-207ENST00000628549 TNS2Q63HR2 1409 aa35.77■■■■□ 3.32
UBE2A-207ENST00000628549 TNS1Q9HBL0 1735 aaKnown RBP35.76■■■■□ 3.31
UBE2A-207ENST00000628549 BAG6P46379 1132 aa35.75■■■■□ 3.31
UBE2A-207ENST00000628549 POLKQ9UBT6 870 aa35.74■■■■□ 3.31
UBE2A-207ENST00000628549 SBF2Q86WG5 1849 aa35.72■■■■□ 3.31
UBE2A-207ENST00000628549 AMER1Q5JTC6 1135 aaPredicted RBP35.72■■■■□ 3.31
UBE2A-207ENST00000628549 TRIM37O94972 964 aa35.71■■■■□ 3.31
UBE2A-207ENST00000628549 PER1O15534 1290 aaPredicted RBP35.69■■■■□ 3.3
UBE2A-207ENST00000628549 NBPF6Q5VWK0 638 aa35.68■■■■□ 3.3
UBE2A-207ENST00000628549 DEFB132Q7Z7B7 95 aa35.68■■■■□ 3.3
UBE2A-207ENST00000628549 MARCH10Q8NA82 808 aaPredicted RBP35.68■■■■□ 3.3
UBE2A-207ENST00000628549 NBPF4Q96M43 638 aa35.68■■■■□ 3.3
UBE2A-207ENST00000628549 ZEB1P37275 1124 aaPredicted RBP35.67■■■■□ 3.3
UBE2A-207ENST00000628549 KAT6BQ8WYB5 2073 aa35.66■■■■□ 3.3
UBE2A-207ENST00000628549 RAPGEF4Q8WZA2 1011 aa35.65■■■■□ 3.3
UBE2A-207ENST00000628549 BCL9O00512 1426 aa35.64■■■■□ 3.3
UBE2A-207ENST00000628549 NPC1L1Q9UHC9 1359 aa35.63■■■■□ 3.29
UBE2A-207ENST00000628549 USHBP1Q8N6Y0 703 aa35.62■■■■□ 3.29
UBE2A-207ENST00000628549 APBA3O96018 575 aa35.61■■■■□ 3.29
UBE2A-207ENST00000628549 CC2D1BQ5T0F9 858 aaKnown RBP35.61■■■■□ 3.29
UBE2A-207ENST00000628549 TATP17735 454 aaPredicted RBP35.6■■■■□ 3.29
UBE2A-207ENST00000628549 MEGF6O75095 1541 aa35.59■■■■□ 3.29
UBE2A-207ENST00000628549 EN1Q05925 392 aaPredicted RBP35.57■■■■□ 3.28
UBE2A-207ENST00000628549 ZCRB1Q8TBF4 217 aaKnown RBP35.57■■■■□ 3.28
UBE2A-207ENST00000628549 SHANK3Q9BYB0 1731 aa35.55■■■■□ 3.28
UBE2A-207ENST00000628549 EIF4A2Q14240 407 aaKnown RBP35.55■■■■□ 3.28
UBE2A-207ENST00000628549 DDX54Q8TDD1 881 aaKnown RBP35.55■■■■□ 3.28
UBE2A-207ENST00000628549 PARD3Q8TEW0 1356 aa35.54■■■■□ 3.28
UBE2A-207ENST00000628549 BCL11BQ9C0K0 894 aaPredicted RBP35.54■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms