RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 RXRBP28702 533 aa10.94□□□□□ -0.66
CCDC163-204ENST00000628293 VPS72Q15906 364 aa10.94□□□□□ -0.66
CCDC163-204ENST00000628293 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
CCDC163-204ENST00000628293 ARHGEF25Q86VW2 580 aa10.94□□□□□ -0.66
CCDC163-204ENST00000628293 RGPD2P0DJD1 1756 aa10.94□□□□□ -0.66
CCDC163-204ENST00000628293 CCDC7Q96M83 1385 aa10.93□□□□□ -0.66
CCDC163-204ENST00000628293 FAM208AQ9UK61 1670 aaKnown RBP10.93□□□□□ -0.66
CCDC163-204ENST00000628293 FYB1O15117 783 aa10.93□□□□□ -0.66
CCDC163-204ENST00000628293 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
CCDC163-204ENST00000628293 PARP4Q9UKK3 1724 aaKnown RBP10.92□□□□□ -0.66
CCDC163-204ENST00000628293 WASHC2AQ641Q2 1341 aa10.92□□□□□ -0.66
CCDC163-204ENST00000628293 SOX12O15370 315 aa10.92□□□□□ -0.66
CCDC163-204ENST00000628293 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
CCDC163-204ENST00000628293 POLR3GLQ9BT43 218 aa10.92□□□□□ -0.66
CCDC163-204ENST00000628293 EP400Q96L91 3159 aa10.91□□□□□ -0.66
CCDC163-204ENST00000628293 SPATA31A5Q5VU36 1347 aa10.91□□□□□ -0.66
CCDC163-204ENST00000628293 SPATA31A7Q8IWB4 1347 aa10.91□□□□□ -0.66
CCDC163-204ENST00000628293 GGNBP2Q9H3C7 697 aa10.91□□□□□ -0.66
CCDC163-204ENST00000628293 AXIN2Q9Y2T1 843 aa10.91□□□□□ -0.66
CCDC163-204ENST00000628293 LRRC37A3O60309 1634 aa10.91□□□□□ -0.66
CCDC163-204ENST00000628293 SPATA31A1Q5TZJ5 1347 aa10.9□□□□□ -0.66
CCDC163-204ENST00000628293 FBLN1P23142 703 aa10.9□□□□□ -0.66
CCDC163-204ENST00000628293 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
CCDC163-204ENST00000628293 PANK3Q9H999 370 aa10.9□□□□□ -0.66
CCDC163-204ENST00000628293 ONECUT3O60422 494 aaPredicted RBP10.89□□□□□ -0.67
CCDC163-204ENST00000628293 LARP1Q6PKG0 1096 aaKnown RBP10.89□□□□□ -0.67
CCDC163-204ENST00000628293 COG3Q96JB2 828 aa10.89□□□□□ -0.67
CCDC163-204ENST00000628293 CRB1P82279 1406 aa10.89□□□□□ -0.67
CCDC163-204ENST00000628293 MAP3K19Q56UN5 1328 aa10.88□□□□□ -0.67
CCDC163-204ENST00000628293 ZBTB7CA1YPR0 619 aa10.88□□□□□ -0.67
CCDC163-204ENST00000628293 BLMP54132 1417 aaPredicted RBP10.88□□□□□ -0.67
CCDC163-204ENST00000628293 STRN4Q9NRL3 753 aa10.88□□□□□ -0.67
CCDC163-204ENST00000628293 CGNL1Q0VF96 1302 aa10.87□□□□□ -0.67
CCDC163-204ENST00000628293 WDR17Q8IZU2 1322 aa10.87□□□□□ -0.67
CCDC163-204ENST00000628293 RTL1A6NKG5 1358 aa10.87□□□□□ -0.67
CCDC163-204ENST00000628293 SHANK3Q9BYB0 1731 aa10.87□□□□□ -0.67
CCDC163-204ENST00000628293 ERBB3P21860 1342 aa10.86□□□□□ -0.67
CCDC163-204ENST00000628293 DISP2A7MBM2 1401 aa10.86□□□□□ -0.67
CCDC163-204ENST00000628293 PER1O15534 1290 aaPredicted RBP10.86□□□□□ -0.67
CCDC163-204ENST00000628293 FAM98CQ17RN3 349 aaKnown RBP10.86□□□□□ -0.67
CCDC163-204ENST00000628293 CCDC9Q9Y3X0 531 aaKnown RBP10.86□□□□□ -0.67
CCDC163-204ENST00000628293 NSD2O96028 1365 aa10.86□□□□□ -0.67
CCDC163-204ENST00000628293 SMG6Q86US8 1419 aaKnown RBP10.85□□□□□ -0.67
CCDC163-204ENST00000628293 RRS1Q15050 365 aaKnown RBP10.85□□□□□ -0.67
CCDC163-204ENST00000628293 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
CCDC163-204ENST00000628293 SEPT12Q8IYM1 358 aa10.85□□□□□ -0.67
CCDC163-204ENST00000628293 CNKSR2Q8WXI2 1034 aa10.85□□□□□ -0.67
CCDC163-204ENST00000628293 IP6K1Q92551 441 aa10.85□□□□□ -0.67
CCDC163-204ENST00000628293 SBF2Q86WG5 1849 aa10.85□□□□□ -0.67
CCDC163-204ENST00000628293 TNS1Q9HBL0 1735 aaKnown RBP10.84□□□□□ -0.67
CCDC163-204ENST00000628293 HOXC9P31274 260 aa10.84□□□□□ -0.67
CCDC163-204ENST00000628293 EVA1CP58658 441 aa10.84□□□□□ -0.67
CCDC163-204ENST00000628293 BARGINQ6ZT62 677 aa10.84□□□□□ -0.67
CCDC163-204ENST00000628293 KIF24Q5T7B8 1368 aa10.84□□□□□ -0.67
CCDC163-204ENST00000628293 TCP11L2Q8N4U5 519 aa10.83□□□□□ -0.68
CCDC163-204ENST00000628293 USP35Q9P2H5 1018 aa10.83□□□□□ -0.68
CCDC163-204ENST00000628293 EMILIN1Q9Y6C2 1016 aa10.83□□□□□ -0.68
CCDC163-204ENST00000628293 FLT4P35916 1363 aa10.82□□□□□ -0.68
CCDC163-204ENST00000628293 RGPD1P0DJD0 1748 aa10.82□□□□□ -0.68
CCDC163-204ENST00000628293 TOM1L2Q6ZVM7 507 aa10.82□□□□□ -0.68
CCDC163-204ENST00000628293 ANKRD24Q8TF21 1146 aa10.82□□□□□ -0.68
CCDC163-204ENST00000628293 CARD10Q9BWT7 1032 aa10.82□□□□□ -0.68
CCDC163-204ENST00000628293 THRAP3Q9Y2W1 955 aaKnown RBP10.82□□□□□ -0.68
CCDC163-204ENST00000628293 NCAPD2Q15021 1401 aa10.82□□□□□ -0.68
CCDC163-204ENST00000628293 INSRP06213 1382 aa10.81□□□□□ -0.68
CCDC163-204ENST00000628293 NPC1L1Q9UHC9 1359 aa10.81□□□□□ -0.68
CCDC163-204ENST00000628293 ZEB1P37275 1124 aaPredicted RBP10.81□□□□□ -0.68
CCDC163-204ENST00000628293 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCDC163-204ENST00000628293 KNSTRNQ9Y448 316 aa10.81□□□□□ -0.68
CCDC163-204ENST00000628293 CSB-PGBD3P0DP91 1061 aa10.8□□□□□ -0.68
CCDC163-204ENST00000628293 AMPHP49418 695 aa10.8□□□□□ -0.68
CCDC163-204ENST00000628293 HSP90AB2PQ58FF8 381 aa10.8□□□□□ -0.68
CCDC163-204ENST00000628293 POLKQ9UBT6 870 aa10.8□□□□□ -0.68
CCDC163-204ENST00000628293 TNS2Q63HR2 1409 aa10.8□□□□□ -0.68
CCDC163-204ENST00000628293 PKD1L3Q7Z443 1732 aa10.8□□□□□ -0.68
CCDC163-204ENST00000628293 MEGF6O75095 1541 aa10.79□□□□□ -0.68
CCDC163-204ENST00000628293 KRT27Q7Z3Y8 459 aa10.79□□□□□ -0.68
CCDC163-204ENST00000628293 LTV1Q96GA3 475 aaPredicted RBP10.79□□□□□ -0.68
CCDC163-204ENST00000628293 A0A0G2JS52 829 aa10.78□□□□□ -0.68
CCDC163-204ENST00000628293 DCAF8L1A6NGE4 600 aa10.78□□□□□ -0.68
CCDC163-204ENST00000628293 TNNT2P45379 298 aaPredicted RBP10.78□□□□□ -0.68
CCDC163-204ENST00000628293 MYT1Q01538 1121 aa10.78□□□□□ -0.68
CCDC163-204ENST00000628293 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
CCDC163-204ENST00000628293 COL3A1P02461 1466 aaPredicted RBP10.77□□□□□ -0.69
CCDC163-204ENST00000628293 NBPF6Q5VWK0 638 aa10.77□□□□□ -0.69
CCDC163-204ENST00000628293 MORC1Q86VD1 984 aa10.77□□□□□ -0.69
CCDC163-204ENST00000628293 NBPF4Q96M43 638 aa10.77□□□□□ -0.69
CCDC163-204ENST00000628293 NLRP2Q9NX02 1062 aa10.77□□□□□ -0.69
CCDC163-204ENST00000628293 NHSQ6T4R5 1651 aa10.76□□□□□ -0.69
CCDC163-204ENST00000628293 DOT1LQ8TEK3 1739 aa10.76□□□□□ -0.69
CCDC163-204ENST00000628293 CC2D1BQ5T0F9 858 aaKnown RBP10.76□□□□□ -0.69
CCDC163-204ENST00000628293 OVOS2A0A0G2JMS6 1433 aa10.75□□□□□ -0.69
CCDC163-204ENST00000628293 CDCA7Q9BWT1 371 aaPredicted RBP10.75□□□□□ -0.69
CCDC163-204ENST00000628293 RREB1Q92766 1687 aa10.75□□□□□ -0.69
CCDC163-204ENST00000628293 TOGARAM1Q9Y4F4 1720 aa10.75□□□□□ -0.69
CCDC163-204ENST00000628293 RGPD3A6NKT7 1758 aaPredicted RBP10.75□□□□□ -0.69
CCDC163-204ENST00000628293 RGPD4Q7Z3J3 1758 aa10.75□□□□□ -0.69
CCDC163-204ENST00000628293 BCL9O00512 1426 aa10.75□□□□□ -0.69
CCDC163-204ENST00000628293 PPM1GO15355 546 aaPredicted RBP10.74□□□□□ -0.69
CCDC163-204ENST00000628293 NPM3O75607 178 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms