RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 FNBP4Q8N3X1 1017 aaPredicted RBP25.52■■□□□ 1.68
MECP2-216ENST00000627864 IP6K1Q92551 441 aa25.52■■□□□ 1.68
MECP2-216ENST00000627864 AXIN2Q9Y2T1 843 aa25.52■■□□□ 1.68
MECP2-216ENST00000627864 PHF23Q9BUL5 403 aaPredicted RBP25.51■■□□□ 1.67
MECP2-216ENST00000627864 USP21Q9UK80 565 aa25.51■■□□□ 1.67
MECP2-216ENST00000627864 PARD3Q8TEW0 1356 aa25.51■■□□□ 1.67
MECP2-216ENST00000627864 ABCC6O95255 1503 aa25.51■■□□□ 1.67
MECP2-216ENST00000627864 HOXC9P31274 260 aa25.5■■□□□ 1.67
MECP2-216ENST00000627864 RALBP1Q15311 655 aa25.5■■□□□ 1.67
MECP2-216ENST00000627864 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.5■■□□□ 1.67
MECP2-216ENST00000627864 EVA1CP58658 441 aa25.49■■□□□ 1.67
MECP2-216ENST00000627864 STRN4Q9NRL3 753 aa25.49■■□□□ 1.67
MECP2-216ENST00000627864 RTL1A6NKG5 1358 aa25.48■■□□□ 1.67
MECP2-216ENST00000627864 PPP2R1AP30153 589 aa25.48■■□□□ 1.67
MECP2-216ENST00000627864 BCL9LQ86UU0 1499 aa25.47■■□□□ 1.67
MECP2-216ENST00000627864 FLT4P35916 1363 aa25.47■■□□□ 1.67
MECP2-216ENST00000627864 KIF24Q5T7B8 1368 aa25.47■■□□□ 1.67
MECP2-216ENST00000627864 MTHFSP49914 203 aa25.47■■□□□ 1.67
MECP2-216ENST00000627864 UNC5CLQ8IV45 518 aa25.47■■□□□ 1.67
MECP2-216ENST00000627864 RGPD2P0DJD1 1756 aa25.46■■□□□ 1.67
MECP2-216ENST00000627864 HSP90AB2PQ58FF8 381 aa25.46■■□□□ 1.67
MECP2-216ENST00000627864 LTV1Q96GA3 475 aaPredicted RBP25.46■■□□□ 1.67
MECP2-216ENST00000627864 PRKRIP1Q9H875 184 aaPredicted RBP25.46■■□□□ 1.67
MECP2-216ENST00000627864 BLMP54132 1417 aaPredicted RBP25.46■■□□□ 1.67
MECP2-216ENST00000627864 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
MECP2-216ENST00000627864 COL5A2P05997 1499 aaPredicted RBP25.45■■□□□ 1.66
MECP2-216ENST00000627864 ANP32CO43423 234 aa25.44■■□□□ 1.66
MECP2-216ENST00000627864 ZNF772Q68DY9 489 aaPredicted RBP25.44■■□□□ 1.66
MECP2-216ENST00000627864 CSB-PGBD3P0DP91 1061 aa25.43■■□□□ 1.66
MECP2-216ENST00000627864 ANKRD24Q8TF21 1146 aa25.43■■□□□ 1.66
MECP2-216ENST00000627864 INSRP06213 1382 aa25.43■■□□□ 1.66
MECP2-216ENST00000627864 CDK12Q9NYV4 1490 aaPredicted RBP25.42■■□□□ 1.66
MECP2-216ENST00000627864 RGS17Q9UGC6 210 aaPredicted RBP25.42■■□□□ 1.66
MECP2-216ENST00000627864 QTRT2Q9H974 415 aaKnown RBP25.41■■□□□ 1.66
MECP2-216ENST00000627864 CCDC9Q9Y3X0 531 aaKnown RBP25.41■■□□□ 1.66
MECP2-216ENST00000627864 FAM208AQ9UK61 1670 aaKnown RBP25.41■■□□□ 1.66
MECP2-216ENST00000627864 LARP1Q6PKG0 1096 aaKnown RBP25.4■■□□□ 1.66
MECP2-216ENST00000627864 TRPC5Q9UL62 973 aaPredicted RBP25.4■■□□□ 1.66
MECP2-216ENST00000627864 ERBB3P21860 1342 aa25.39■■□□□ 1.66
MECP2-216ENST00000627864 WDR17Q8IZU2 1322 aa25.39■■□□□ 1.66
MECP2-216ENST00000627864 MYBBP1AQ9BQG0 1328 aaKnown RBP25.39■■□□□ 1.66
MECP2-216ENST00000627864 VPS72Q15906 364 aa25.39■■□□□ 1.66
MECP2-216ENST00000627864 DIEXFQ68CQ4 756 aaKnown RBP25.39■■□□□ 1.66
MECP2-216ENST00000627864 TOM1L2Q6ZVM7 507 aa25.38■■□□□ 1.65
MECP2-216ENST00000627864 ATRNO75882 1429 aa25.37■■□□□ 1.65
MECP2-216ENST00000627864 NLRP2Q9NX02 1062 aa25.37■■□□□ 1.65
MECP2-216ENST00000627864 CFAP53Q96M91 514 aa25.36■■□□□ 1.65
MECP2-216ENST00000627864 CRB1P82279 1406 aa25.36■■□□□ 1.65
MECP2-216ENST00000627864 EIF4A2Q14240 407 aaKnown RBP25.35■■□□□ 1.65
MECP2-216ENST00000627864 USP35Q9P2H5 1018 aa25.35■■□□□ 1.65
MECP2-216ENST00000627864 SPATA31A5Q5VU36 1347 aa25.35■■□□□ 1.65
MECP2-216ENST00000627864 SPATA31A7Q8IWB4 1347 aa25.35■■□□□ 1.65
MECP2-216ENST00000627864 POTEAQ6S8J7 498 aa25.34■■□□□ 1.65
MECP2-216ENST00000627864 GJD4Q96KN9 370 aaPredicted RBP25.33■■□□□ 1.65
MECP2-216ENST00000627864 SPATA31A1Q5TZJ5 1347 aa25.33■■□□□ 1.64
MECP2-216ENST00000627864 DIAPH1O60610 1272 aaKnown RBP25.32■■□□□ 1.64
MECP2-216ENST00000627864 CARD10Q9BWT7 1032 aa25.32■■□□□ 1.64
MECP2-216ENST00000627864 GLI3P10071 1580 aa25.31■■□□□ 1.64
MECP2-216ENST00000627864 NBPF6Q5VWK0 638 aa25.31■■□□□ 1.64
MECP2-216ENST00000627864 NBPF4Q96M43 638 aa25.31■■□□□ 1.64
MECP2-216ENST00000627864 COL3A1P02461 1466 aaPredicted RBP25.31■■□□□ 1.64
MECP2-216ENST00000627864 IL13P35225 146 aa25.3■■□□□ 1.64
MECP2-216ENST00000627864 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
MECP2-216ENST00000627864 RBM6P78332 1123 aaKnown RBP25.29■■□□□ 1.64
MECP2-216ENST00000627864 EYA1Q99502 592 aa25.29■■□□□ 1.64
MECP2-216ENST00000627864 RXRBP28702 533 aa25.28■■□□□ 1.64
MECP2-216ENST00000627864 TCP11L2Q8N4U5 519 aa25.28■■□□□ 1.64
MECP2-216ENST00000627864 USHBP1Q8N6Y0 703 aa25.28■■□□□ 1.64
MECP2-216ENST00000627864 RGPD1P0DJD0 1748 aa25.27■■□□□ 1.64
MECP2-216ENST00000627864 U2SURPO15042 1029 aaKnown RBP25.25■■□□□ 1.63
MECP2-216ENST00000627864 FAM98CQ17RN3 349 aaKnown RBP25.25■■□□□ 1.63
MECP2-216ENST00000627864 THRAP3Q9Y2W1 955 aaKnown RBP25.25■■□□□ 1.63
MECP2-216ENST00000627864 NUDCQ9Y266 331 aa25.24■■□□□ 1.63
MECP2-216ENST00000627864 IGSF1Q8N6C5 1336 aa25.22■■□□□ 1.63
MECP2-216ENST00000627864 BARGINQ6ZT62 677 aa25.22■■□□□ 1.63
MECP2-216ENST00000627864 A0A0G2JS52 829 aa25.21■■□□□ 1.63
MECP2-216ENST00000627864 MYT1Q01538 1121 aa25.21■■□□□ 1.63
MECP2-216ENST00000627864 CCDC184Q52MB2 194 aa25.21■■□□□ 1.63
MECP2-216ENST00000627864 BRWD3Q6RI45 1802 aa25.21■■□□□ 1.63
MECP2-216ENST00000627864 PARP4Q9UKK3 1724 aaKnown RBP25.2■■□□□ 1.62
MECP2-216ENST00000627864 IL2RBP14784 551 aa25.19■■□□□ 1.62
MECP2-216ENST00000627864 SULT6B1Q6IMI4 303 aa25.19■■□□□ 1.62
MECP2-216ENST00000627864 NCAPD2Q15021 1401 aa25.19■■□□□ 1.62
MECP2-216ENST00000627864 THSD7AQ9UPZ6 1657 aa25.18■■□□□ 1.62
MECP2-216ENST00000627864 ONECUT3O60422 494 aaPredicted RBP25.18■■□□□ 1.62
MECP2-216ENST00000627864 HMOX1P09601 288 aa25.18■■□□□ 1.62
MECP2-216ENST00000627864 U2AF1L5P0DN76 240 aaPredicted RBP25.18■■□□□ 1.62
MECP2-216ENST00000627864 U2AF1Q01081 240 aaKnown RBP eCLIP25.18■■□□□ 1.62
MECP2-216ENST00000627864 AEBP1Q8IUX7 1158 aa25.18■■□□□ 1.62
MECP2-216ENST00000627864 RAPGEF4Q8WZA2 1011 aa25.18■■□□□ 1.62
MECP2-216ENST00000627864 CDCA7Q9BWT1 371 aaPredicted RBP25.17■■□□□ 1.62
MECP2-216ENST00000627864 MRS2Q9HD23 443 aa25.17■■□□□ 1.62
MECP2-216ENST00000627864 DISP2A7MBM2 1401 aa25.16■■□□□ 1.62
MECP2-216ENST00000627864 TATP17735 454 aaPredicted RBP25.16■■□□□ 1.62
MECP2-216ENST00000627864 SEPT12Q8IYM1 358 aa25.16■■□□□ 1.62
MECP2-216ENST00000627864 MIER1Q8N108 512 aa25.16■■□□□ 1.62
MECP2-216ENST00000627864 MEGF6O75095 1541 aa25.14■■□□□ 1.62
MECP2-216ENST00000627864 LRRC37A3O60309 1634 aa25.13■■□□□ 1.61
MECP2-216ENST00000627864 WDR43Q15061 677 aaKnown RBP eCLIP25.13■■□□□ 1.61
MECP2-216ENST00000627864 RGS12O14924 1447 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms