RNA–Protein interactions for RNA: ENST00000627530.2

SOX2-OT-243, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 876 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-243ENST00000627530 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
SOX2-OT-243ENST00000627530 FBLN1P23142 703 aa18.73■□□□□ 0.59
SOX2-OT-243ENST00000627530 LARP1Q6PKG0 1096 aaKnown RBP18.73■□□□□ 0.59
SOX2-OT-243ENST00000627530 CGNL1Q0VF96 1302 aa18.73■□□□□ 0.59
SOX2-OT-243ENST00000627530 EVA1CP58658 441 aa18.72■□□□□ 0.59
SOX2-OT-243ENST00000627530 ABCC6O95255 1503 aa18.72■□□□□ 0.59
SOX2-OT-243ENST00000627530 KIF20BQ96Q89 1820 aa18.72■□□□□ 0.59
SOX2-OT-243ENST00000627530 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.59
SOX2-OT-243ENST00000627530 MAP3K19Q56UN5 1328 aa18.7■□□□□ 0.58
SOX2-OT-243ENST00000627530 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
SOX2-OT-243ENST00000627530 FAM98CQ17RN3 349 aaKnown RBP18.69■□□□□ 0.58
SOX2-OT-243ENST00000627530 RRS1Q15050 365 aaKnown RBP18.68■□□□□ 0.58
SOX2-OT-243ENST00000627530 SEPT12Q8IYM1 358 aa18.68■□□□□ 0.58
SOX2-OT-243ENST00000627530 USP35Q9P2H5 1018 aa18.68■□□□□ 0.58
SOX2-OT-243ENST00000627530 CRB1P82279 1406 aa18.67■□□□□ 0.58
SOX2-OT-243ENST00000627530 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
SOX2-OT-243ENST00000627530 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
SOX2-OT-243ENST00000627530 LTN1O94822 1766 aa18.66■□□□□ 0.58
SOX2-OT-243ENST00000627530 IP6K1Q92551 441 aa18.66■□□□□ 0.58
SOX2-OT-243ENST00000627530 KNSTRNQ9Y448 316 aa18.65■□□□□ 0.58
SOX2-OT-243ENST00000627530 ERBB3P21860 1342 aa18.65■□□□□ 0.58
SOX2-OT-243ENST00000627530 BLMP54132 1417 aaPredicted RBP18.65■□□□□ 0.58
SOX2-OT-243ENST00000627530 THSD7AQ9UPZ6 1657 aa18.64■□□□□ 0.57
SOX2-OT-243ENST00000627530 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
SOX2-OT-243ENST00000627530 HOXC9P31274 260 aa18.64■□□□□ 0.57
SOX2-OT-243ENST00000627530 TOM1L2Q6ZVM7 507 aa18.64■□□□□ 0.57
SOX2-OT-243ENST00000627530 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
SOX2-OT-243ENST00000627530 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
SOX2-OT-243ENST00000627530 NSD2O96028 1365 aa18.64■□□□□ 0.57
SOX2-OT-243ENST00000627530 A0A0G2JS52 829 aa18.63■□□□□ 0.57
SOX2-OT-243ENST00000627530 CSB-PGBD3P0DP91 1061 aa18.63■□□□□ 0.57
SOX2-OT-243ENST00000627530 AMPHP49418 695 aa18.63■□□□□ 0.57
SOX2-OT-243ENST00000627530 MYT1Q01538 1121 aa18.63■□□□□ 0.57
SOX2-OT-243ENST00000627530 AMER1Q5JTC6 1135 aaPredicted RBP18.63■□□□□ 0.57
SOX2-OT-243ENST00000627530 BARGINQ6ZT62 677 aa18.63■□□□□ 0.57
SOX2-OT-243ENST00000627530 ANKRD24Q8TF21 1146 aa18.63■□□□□ 0.57
SOX2-OT-243ENST00000627530 THRAP3Q9Y2W1 955 aaKnown RBP18.62■□□□□ 0.57
SOX2-OT-243ENST00000627530 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
SOX2-OT-243ENST00000627530 RGPD5Q99666 1765 aa18.62■□□□□ 0.57
SOX2-OT-243ENST00000627530 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
SOX2-OT-243ENST00000627530 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
SOX2-OT-243ENST00000627530 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
SOX2-OT-243ENST00000627530 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
SOX2-OT-243ENST00000627530 FLT4P35916 1363 aa18.59■□□□□ 0.57
SOX2-OT-243ENST00000627530 KIF24Q5T7B8 1368 aa18.59■□□□□ 0.57
SOX2-OT-243ENST00000627530 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
SOX2-OT-243ENST00000627530 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
SOX2-OT-243ENST00000627530 NLRP2Q9NX02 1062 aa18.58■□□□□ 0.56
SOX2-OT-243ENST00000627530 POLKQ9UBT6 870 aa18.58■□□□□ 0.56
SOX2-OT-243ENST00000627530 INSRP06213 1382 aa18.57■□□□□ 0.56
SOX2-OT-243ENST00000627530 HSP90AB2PQ58FF8 381 aa18.57■□□□□ 0.56
SOX2-OT-243ENST00000627530 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
SOX2-OT-243ENST00000627530 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
SOX2-OT-243ENST00000627530 BRWD3Q6RI45 1802 aa18.56■□□□□ 0.56
SOX2-OT-243ENST00000627530 UPF1Q92900 1129 aaKnown RBP eCLIP18.56■□□□□ 0.56
SOX2-OT-243ENST00000627530 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
SOX2-OT-243ENST00000627530 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
SOX2-OT-243ENST00000627530 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
SOX2-OT-243ENST00000627530 SMG6Q86US8 1419 aaKnown RBP18.54■□□□□ 0.56
SOX2-OT-243ENST00000627530 FAM182BQ5T319 152 aa18.53■□□□□ 0.56
SOX2-OT-243ENST00000627530 LRRC37A3O60309 1634 aa18.52■□□□□ 0.56
SOX2-OT-243ENST00000627530 PARP4Q9UKK3 1724 aaKnown RBP18.52■□□□□ 0.56
SOX2-OT-243ENST00000627530 WNK3Q9BYP7 1800 aa18.51■□□□□ 0.55
SOX2-OT-243ENST00000627530 FAM208AQ9UK61 1670 aaKnown RBP18.51■□□□□ 0.55
SOX2-OT-243ENST00000627530 NBPF6Q5VWK0 638 aa18.51■□□□□ 0.55
SOX2-OT-243ENST00000627530 NBPF4Q96M43 638 aa18.51■□□□□ 0.55
SOX2-OT-243ENST00000627530 CDCA7Q9BWT1 371 aaPredicted RBP18.51■□□□□ 0.55
SOX2-OT-243ENST00000627530 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
SOX2-OT-243ENST00000627530 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
SOX2-OT-243ENST00000627530 DDB1Q16531 1140 aa18.5■□□□□ 0.55
SOX2-OT-243ENST00000627530 IL2RBP14784 551 aa18.49■□□□□ 0.55
SOX2-OT-243ENST00000627530 USHBP1Q8N6Y0 703 aa18.49■□□□□ 0.55
SOX2-OT-243ENST00000627530 TNS2Q63HR2 1409 aa18.48■□□□□ 0.55
SOX2-OT-243ENST00000627530 EP400Q96L91 3159 aa18.47■□□□□ 0.55
SOX2-OT-243ENST00000627530 EIF4A2Q14240 407 aaKnown RBP18.47■□□□□ 0.55
SOX2-OT-243ENST00000627530 MEGF6O75095 1541 aa18.46■□□□□ 0.55
SOX2-OT-243ENST00000627530 NCAPD2Q15021 1401 aa18.46■□□□□ 0.55
SOX2-OT-243ENST00000627530 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
SOX2-OT-243ENST00000627530 MARCH10Q8NA82 808 aaPredicted RBP18.45■□□□□ 0.54
SOX2-OT-243ENST00000627530 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
SOX2-OT-243ENST00000627530 OVOS2A0A0G2JMS6 1433 aa18.44■□□□□ 0.54
SOX2-OT-243ENST00000627530 EXOC5O00471 708 aa18.44■□□□□ 0.54
SOX2-OT-243ENST00000627530 DDX10Q13206 875 aaKnown RBP18.44■□□□□ 0.54
SOX2-OT-243ENST00000627530 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
SOX2-OT-243ENST00000627530 EYA1Q99502 592 aa18.44■□□□□ 0.54
SOX2-OT-243ENST00000627530 MTHFSP49914 203 aa18.43■□□□□ 0.54
SOX2-OT-243ENST00000627530 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
SOX2-OT-243ENST00000627530 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
SOX2-OT-243ENST00000627530 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
SOX2-OT-243ENST00000627530 BCL9O00512 1426 aa18.4■□□□□ 0.54
SOX2-OT-243ENST00000627530 TRIM37O94972 964 aa18.39■□□□□ 0.53
SOX2-OT-243ENST00000627530 IL13P35225 146 aa18.39■□□□□ 0.53
SOX2-OT-243ENST00000627530 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
SOX2-OT-243ENST00000627530 SF3B2Q13435 895 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-243ENST00000627530 DEFB132Q7Z7B7 95 aa18.37■□□□□ 0.53
SOX2-OT-243ENST00000627530 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-243ENST00000627530 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
SOX2-OT-243ENST00000627530 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
SOX2-OT-243ENST00000627530 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
SOX2-OT-243ENST00000627530 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms