RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.31■□□□□ 0.84
PNKP-221ENST00000627317 STRN4Q9NRL3 753 aa20.31■□□□□ 0.84
PNKP-221ENST00000627317 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
PNKP-221ENST00000627317 KCNH5Q8NCM2 988 aa20.3■□□□□ 0.84
PNKP-221ENST00000627317 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
PNKP-221ENST00000627317 AXIN2Q9Y2T1 843 aa20.29■□□□□ 0.84
PNKP-221ENST00000627317 BLMP54132 1417 aaPredicted RBP20.27■□□□□ 0.84
PNKP-221ENST00000627317 CRB1P82279 1406 aa20.27■□□□□ 0.84
PNKP-221ENST00000627317 CCDC125Q86Z20 511 aa20.26■□□□□ 0.83
PNKP-221ENST00000627317 EVA1CP58658 441 aa20.25■□□□□ 0.83
PNKP-221ENST00000627317 TCP11L2Q8N4U5 519 aa20.25■□□□□ 0.83
PNKP-221ENST00000627317 NSD3Q9BZ95 1437 aa20.25■□□□□ 0.83
PNKP-221ENST00000627317 PANK3Q9H999 370 aa20.24■□□□□ 0.83
PNKP-221ENST00000627317 WDR17Q8IZU2 1322 aa20.24■□□□□ 0.83
PNKP-221ENST00000627317 A0A0G2JS52 829 aa20.23■□□□□ 0.83
PNKP-221ENST00000627317 SOX12O15370 315 aa20.23■□□□□ 0.83
PNKP-221ENST00000627317 MYT1Q01538 1121 aa20.23■□□□□ 0.83
PNKP-221ENST00000627317 USP35Q9P2H5 1018 aa20.23■□□□□ 0.83
PNKP-221ENST00000627317 THRAP3Q9Y2W1 955 aaKnown RBP20.23■□□□□ 0.83
PNKP-221ENST00000627317 PARP4Q9UKK3 1724 aaKnown RBP20.22■□□□□ 0.83
PNKP-221ENST00000627317 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
PNKP-221ENST00000627317 CARD14Q9BXL6 1004 aa20.21■□□□□ 0.83
PNKP-221ENST00000627317 LRRC37A3O60309 1634 aa20.2■□□□□ 0.82
PNKP-221ENST00000627317 DISP2A7MBM2 1401 aa20.19■□□□□ 0.82
PNKP-221ENST00000627317 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
PNKP-221ENST00000627317 WNK3Q9BYP7 1800 aa20.19■□□□□ 0.82
PNKP-221ENST00000627317 FAM182BQ5T319 152 aa20.19■□□□□ 0.82
PNKP-221ENST00000627317 LTN1O94822 1766 aa20.18■□□□□ 0.82
PNKP-221ENST00000627317 RGPD5Q99666 1765 aa20.18■□□□□ 0.82
PNKP-221ENST00000627317 ZNF316A6NFI3 1004 aaPredicted RBP20.18■□□□□ 0.82
PNKP-221ENST00000627317 ERBB3P21860 1342 aa20.18■□□□□ 0.82
PNKP-221ENST00000627317 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
PNKP-221ENST00000627317 FYB1O15117 783 aa20.16■□□□□ 0.82
PNKP-221ENST00000627317 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
PNKP-221ENST00000627317 CARD10Q9BWT7 1032 aa20.16■□□□□ 0.82
PNKP-221ENST00000627317 KNSTRNQ9Y448 316 aa20.16■□□□□ 0.82
PNKP-221ENST00000627317 PEAK1Q9H792 1746 aa20.16■□□□□ 0.82
PNKP-221ENST00000627317 TNS1Q9HBL0 1735 aaKnown RBP20.16■□□□□ 0.82
PNKP-221ENST00000627317 RGPD1P0DJD0 1748 aa20.14■□□□□ 0.81
PNKP-221ENST00000627317 COG3Q96JB2 828 aa20.14■□□□□ 0.81
PNKP-221ENST00000627317 SRCAPQ6ZRS2 3230 aa20.14■□□□□ 0.81
PNKP-221ENST00000627317 DEFB132Q7Z7B7 95 aa20.13■□□□□ 0.81
PNKP-221ENST00000627317 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
PNKP-221ENST00000627317 MAP3K19Q56UN5 1328 aa20.12■□□□□ 0.81
PNKP-221ENST00000627317 NSD2O96028 1365 aa20.11■□□□□ 0.81
PNKP-221ENST00000627317 FAM196AQ6ZSG2 479 aa20.11■□□□□ 0.81
PNKP-221ENST00000627317 IP6K1Q92551 441 aa20.11■□□□□ 0.81
PNKP-221ENST00000627317 RTL1A6NKG5 1358 aa20.1■□□□□ 0.81
PNKP-221ENST00000627317 FBLN1P23142 703 aa20.1■□□□□ 0.81
PNKP-221ENST00000627317 DDX10Q13206 875 aaKnown RBP20.1■□□□□ 0.81
PNKP-221ENST00000627317 CSB-PGBD3P0DP91 1061 aa20.09■□□□□ 0.81
PNKP-221ENST00000627317 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
PNKP-221ENST00000627317 ANKRD24Q8TF21 1146 aa20.09■□□□□ 0.81
PNKP-221ENST00000627317 CDCA7Q9BWT1 371 aaPredicted RBP20.09■□□□□ 0.81
PNKP-221ENST00000627317 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
PNKP-221ENST00000627317 BCL9O00512 1426 aa20.09■□□□□ 0.81
PNKP-221ENST00000627317 PER1O15534 1290 aaPredicted RBP20.08■□□□□ 0.81
PNKP-221ENST00000627317 OVOS2A0A0G2JMS6 1433 aa20.08■□□□□ 0.8
PNKP-221ENST00000627317 TNS2Q63HR2 1409 aa20.08■□□□□ 0.8
PNKP-221ENST00000627317 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
PNKP-221ENST00000627317 HOXC9P31274 260 aa20.07■□□□□ 0.8
PNKP-221ENST00000627317 SF3B2Q13435 895 aaKnown RBP20.07■□□□□ 0.8
PNKP-221ENST00000627317 AMER1Q5JTC6 1135 aaPredicted RBP20.07■□□□□ 0.8
PNKP-221ENST00000627317 DDB1Q16531 1140 aa20.06■□□□□ 0.8
PNKP-221ENST00000627317 TRIM37O94972 964 aa20.05■□□□□ 0.8
PNKP-221ENST00000627317 BAG6P46379 1132 aa20.05■□□□□ 0.8
PNKP-221ENST00000627317 RRS1Q15050 365 aaKnown RBP20.05■□□□□ 0.8
PNKP-221ENST00000627317 MARCH10Q8NA82 808 aaPredicted RBP20.05■□□□□ 0.8
PNKP-221ENST00000627317 NLRP2Q9NX02 1062 aa20.04■□□□□ 0.8
PNKP-221ENST00000627317 KIF24Q5T7B8 1368 aa20.04■□□□□ 0.8
PNKP-221ENST00000627317 NPC1L1Q9UHC9 1359 aa20.04■□□□□ 0.8
PNKP-221ENST00000627317 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
PNKP-221ENST00000627317 CC2D1BQ5T0F9 858 aaKnown RBP20.03■□□□□ 0.8
PNKP-221ENST00000627317 MORC1Q86VD1 984 aa20.03■□□□□ 0.8
PNKP-221ENST00000627317 EN1Q05925 392 aaPredicted RBP20.02■□□□□ 0.8
PNKP-221ENST00000627317 CAMKK2Q96RR4 588 aa20.02■□□□□ 0.8
PNKP-221ENST00000627317 TNNT2P45379 298 aaPredicted RBP20.01■□□□□ 0.79
PNKP-221ENST00000627317 INSRP06213 1382 aa20■□□□□ 0.79
PNKP-221ENST00000627317 FLT4P35916 1363 aa20■□□□□ 0.79
PNKP-221ENST00000627317 PARD3Q8TEW0 1356 aa20■□□□□ 0.79
PNKP-221ENST00000627317 IL2RBP14784 551 aa20■□□□□ 0.79
PNKP-221ENST00000627317 AMPHP49418 695 aa20■□□□□ 0.79
PNKP-221ENST00000627317 RREB1Q92766 1687 aa20■□□□□ 0.79
PNKP-221ENST00000627317 SBF2Q86WG5 1849 aa19.99■□□□□ 0.79
PNKP-221ENST00000627317 LTV1Q96GA3 475 aaPredicted RBP19.98■□□□□ 0.79
PNKP-221ENST00000627317 MEGF6O75095 1541 aa19.97■□□□□ 0.79
PNKP-221ENST00000627317 EXOC5O00471 708 aa19.97■□□□□ 0.79
PNKP-221ENST00000627317 EZH2Q15910 746 aaKnown RBP19.97■□□□□ 0.79
PNKP-221ENST00000627317 PTF1AQ7RTS3 328 aa19.97■□□□□ 0.79
PNKP-221ENST00000627317 EMILIN1Q9Y6C2 1016 aa19.97■□□□□ 0.79
PNKP-221ENST00000627317 RGPD3A6NKT7 1758 aaPredicted RBP19.97■□□□□ 0.79
PNKP-221ENST00000627317 RGPD4Q7Z3J3 1758 aa19.97■□□□□ 0.79
PNKP-221ENST00000627317 NCAPD2Q15021 1401 aa19.96■□□□□ 0.79
PNKP-221ENST00000627317 APBA3O96018 575 aa19.96■□□□□ 0.79
PNKP-221ENST00000627317 HSP90AB2PQ58FF8 381 aa19.96■□□□□ 0.79
PNKP-221ENST00000627317 NBPF6Q5VWK0 638 aa19.95■□□□□ 0.78
PNKP-221ENST00000627317 NBPF4Q96M43 638 aa19.95■□□□□ 0.78
PNKP-221ENST00000627317 RGPD2P0DJD1 1756 aa19.95■□□□□ 0.78
PNKP-221ENST00000627317 NUP188Q5SRE5 1749 aa19.94■□□□□ 0.78
PNKP-221ENST00000627317 BCL11BQ9C0K0 894 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms