RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 CCDC9Q9Y3X0 531 aaKnown RBP26.01■■□□□ 1.75
CNOT9-209ENST00000627282 NSD2O96028 1365 aa26■■□□□ 1.75
CNOT9-209ENST00000627282 NFAT5O94916 1531 aa26■■□□□ 1.75
CNOT9-209ENST00000627282 SOX12O15370 315 aa25.99■■□□□ 1.75
CNOT9-209ENST00000627282 NPC1L1Q9UHC9 1359 aa25.98■■□□□ 1.75
CNOT9-209ENST00000627282 KCNH5Q8NCM2 988 aa25.98■■□□□ 1.75
CNOT9-209ENST00000627282 ANKRD26Q9UPS8 1709 aa25.98■■□□□ 1.75
CNOT9-209ENST00000627282 FBLN1P23142 703 aa25.96■■□□□ 1.75
CNOT9-209ENST00000627282 UPF1Q92900 1129 aaKnown RBP eCLIP25.96■■□□□ 1.752e-6■■□□□ 13.7
CNOT9-209ENST00000627282 LMO7Q8WWI1 1683 aa25.96■■□□□ 1.75
CNOT9-209ENST00000627282 ONECUT3O60422 494 aaPredicted RBP25.96■■□□□ 1.75
CNOT9-209ENST00000627282 CC2D1BQ5T0F9 858 aaKnown RBP25.96■■□□□ 1.75
CNOT9-209ENST00000627282 CAMTA1Q9Y6Y1 1673 aa25.94■■□□□ 1.74
CNOT9-209ENST00000627282 SPATA31A5Q5VU36 1347 aa25.94■■□□□ 1.74
CNOT9-209ENST00000627282 SPATA31A7Q8IWB4 1347 aa25.94■■□□□ 1.74
CNOT9-209ENST00000627282 CNGB1Q14028 1251 aaPredicted RBP25.93■■□□□ 1.74
CNOT9-209ENST00000627282 ARHGEF25Q86VW2 580 aa25.92■■□□□ 1.74
CNOT9-209ENST00000627282 SEPT12Q8IYM1 358 aa25.92■■□□□ 1.74
CNOT9-209ENST00000627282 MORC1Q86VD1 984 aa25.92■■□□□ 1.74
CNOT9-209ENST00000627282 STRN4Q9NRL3 753 aa25.92■■□□□ 1.74
CNOT9-209ENST00000627282 AATKQ6ZMQ8 1374 aa25.91■■□□□ 1.74
CNOT9-209ENST00000627282 TNNT2P45379 298 aaPredicted RBP25.9■■□□□ 1.74
CNOT9-209ENST00000627282 FAM98CQ17RN3 349 aaKnown RBP25.89■■□□□ 1.74
CNOT9-209ENST00000627282 SPATA31A1Q5TZJ5 1347 aa25.89■■□□□ 1.73
CNOT9-209ENST00000627282 EP400Q96L91 3159 aa25.89■■□□□ 1.73
CNOT9-209ENST00000627282 EVA1CP58658 441 aa25.88■■□□□ 1.73
CNOT9-209ENST00000627282 RRS1Q15050 365 aaKnown RBP25.88■■□□□ 1.73
CNOT9-209ENST00000627282 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
CNOT9-209ENST00000627282 ZBTB7CA1YPR0 619 aa25.88■■□□□ 1.73
CNOT9-209ENST00000627282 COL5A2P05997 1499 aaPredicted RBP25.87■■□□□ 1.73
CNOT9-209ENST00000627282 BRWD3Q6RI45 1802 aa25.87■■□□□ 1.73
CNOT9-209ENST00000627282 LTN1O94822 1766 aa25.86■■□□□ 1.73
CNOT9-209ENST00000627282 COL18A1P39060 1754 aa25.86■■□□□ 1.73
CNOT9-209ENST00000627282 LARP1Q6PKG0 1096 aaKnown RBP25.85■■□□□ 1.73
CNOT9-209ENST00000627282 THSD7AQ9UPZ6 1657 aa25.84■■□□□ 1.73
CNOT9-209ENST00000627282 A0A0G2JS52 829 aa25.84■■□□□ 1.73
CNOT9-209ENST00000627282 MYT1Q01538 1121 aa25.84■■□□□ 1.73
CNOT9-209ENST00000627282 PRKRIP1Q9H875 184 aaPredicted RBP25.84■■□□□ 1.73
CNOT9-209ENST00000627282 POLKQ9UBT6 870 aa25.83■■□□□ 1.73
CNOT9-209ENST00000627282 AXIN2Q9Y2T1 843 aa25.83■■□□□ 1.73
CNOT9-209ENST00000627282 EMILIN1Q9Y6C2 1016 aa25.83■■□□□ 1.73
CNOT9-209ENST00000627282 MAP2P11137 1827 aaKnown RBP25.82■■□□□ 1.72
CNOT9-209ENST00000627282 KRT27Q7Z3Y8 459 aa25.81■■□□□ 1.72
CNOT9-209ENST00000627282 PARD3Q8TEW0 1356 aa25.81■■□□□ 1.72
CNOT9-209ENST00000627282 ABCC6O95255 1503 aa25.81■■□□□ 1.72
CNOT9-209ENST00000627282 PEAK1Q9H792 1746 aa25.81■■□□□ 1.72
CNOT9-209ENST00000627282 USP35Q9P2H5 1018 aa25.81■■□□□ 1.72
CNOT9-209ENST00000627282 CRB1P82279 1406 aa25.79■■□□□ 1.72
CNOT9-209ENST00000627282 AMPHP49418 695 aa25.79■■□□□ 1.72
CNOT9-209ENST00000627282 BARGINQ6ZT62 677 aa25.79■■□□□ 1.72
CNOT9-209ENST00000627282 IP6K1Q92551 441 aa25.79■■□□□ 1.72
CNOT9-209ENST00000627282 SMG6Q86US8 1419 aaKnown RBP25.79■■□□□ 1.72
CNOT9-209ENST00000627282 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
CNOT9-209ENST00000627282 HOXC9P31274 260 aa25.78■■□□□ 1.72
CNOT9-209ENST00000627282 TCP11L2Q8N4U5 519 aa25.78■■□□□ 1.72
CNOT9-209ENST00000627282 KIF24Q5T7B8 1368 aa25.77■■□□□ 1.72
CNOT9-209ENST00000627282 RGPD5Q99666 1765 aa25.77■■□□□ 1.72
CNOT9-209ENST00000627282 PPM1GO15355 546 aaPredicted RBP25.76■■□□□ 1.71
CNOT9-209ENST00000627282 THRAP3Q9Y2W1 955 aaKnown RBP25.76■■□□□ 1.71
CNOT9-209ENST00000627282 FLT4P35916 1363 aa25.76■■□□□ 1.71
CNOT9-209ENST00000627282 WDR17Q8IZU2 1322 aa25.75■■□□□ 1.71
CNOT9-209ENST00000627282 BLMP54132 1417 aaPredicted RBP25.75■■□□□ 1.71
CNOT9-209ENST00000627282 HSP90AB2PQ58FF8 381 aa25.74■■□□□ 1.71
CNOT9-209ENST00000627282 CCDC125Q86Z20 511 aa25.74■■□□□ 1.71
CNOT9-209ENST00000627282 PPP2R1AP30153 589 aa25.74■■□□□ 1.71
CNOT9-209ENST00000627282 MTHFSP49914 203 aa25.74■■□□□ 1.71
CNOT9-209ENST00000627282 RALBP1Q15311 655 aa25.74■■□□□ 1.71
CNOT9-209ENST00000627282 TOM1L2Q6ZVM7 507 aa25.73■■□□□ 1.71
CNOT9-209ENST00000627282 INSRP06213 1382 aa25.72■■□□□ 1.71
CNOT9-209ENST00000627282 ERBB3P21860 1342 aa25.72■■□□□ 1.71
CNOT9-209ENST00000627282 ANKRD24Q8TF21 1146 aa25.7■■□□□ 1.71
CNOT9-209ENST00000627282 CSB-PGBD3P0DP91 1061 aa25.69■■□□□ 1.7
CNOT9-209ENST00000627282 LTV1Q96GA3 475 aaPredicted RBP25.69■■□□□ 1.7
CNOT9-209ENST00000627282 PARP4Q9UKK3 1724 aaKnown RBP25.67■■□□□ 1.7
CNOT9-209ENST00000627282 CARD10Q9BWT7 1032 aa25.67■■□□□ 1.7
CNOT9-209ENST00000627282 FAM182BQ5T319 152 aa25.66■■□□□ 1.7
CNOT9-209ENST00000627282 GTF3C3Q9Y5Q9 886 aa25.66■■□□□ 1.7
CNOT9-209ENST00000627282 MYBBP1AQ9BQG0 1328 aaKnown RBP25.65■■□□□ 1.7
CNOT9-209ENST00000627282 PDE3BQ13370 1112 aa25.64■■□□□ 1.7
CNOT9-209ENST00000627282 EIF4A2Q14240 407 aaKnown RBP25.63■■□□□ 1.69
CNOT9-209ENST00000627282 WNK3Q9BYP7 1800 aa25.63■■□□□ 1.69
CNOT9-209ENST00000627282 COL3A1P02461 1466 aaPredicted RBP25.63■■□□□ 1.69
CNOT9-209ENST00000627282 CCDC184Q52MB2 194 aa25.63■■□□□ 1.69
CNOT9-209ENST00000627282 LRRC37A3O60309 1634 aa25.62■■□□□ 1.69
CNOT9-209ENST00000627282 SF3B2Q13435 895 aaKnown RBP25.61■■□□□ 1.69
CNOT9-209ENST00000627282 FAM196AQ6ZSG2 479 aa25.61■■□□□ 1.69
CNOT9-209ENST00000627282 CDCA7Q9BWT1 371 aaPredicted RBP25.61■■□□□ 1.69
CNOT9-209ENST00000627282 DISP2A7MBM2 1401 aa25.6■■□□□ 1.69
CNOT9-209ENST00000627282 NLRP2Q9NX02 1062 aa25.6■■□□□ 1.69
CNOT9-209ENST00000627282 NBPF6Q5VWK0 638 aa25.59■■□□□ 1.69
CNOT9-209ENST00000627282 NBPF4Q96M43 638 aa25.59■■□□□ 1.69
CNOT9-209ENST00000627282 MRS2Q9HD23 443 aa25.59■■□□□ 1.69
CNOT9-209ENST00000627282 RGPD2P0DJD1 1756 aa25.59■■□□□ 1.69
CNOT9-209ENST00000627282 FAM208AQ9UK61 1670 aaKnown RBP25.59■■□□□ 1.69
CNOT9-209ENST00000627282 IL13P35225 146 aa25.59■■□□□ 1.69
CNOT9-209ENST00000627282 DDB1Q16531 1140 aa25.58■■□□□ 1.69
CNOT9-209ENST00000627282 RGPD1P0DJD0 1748 aa25.58■■□□□ 1.68
CNOT9-209ENST00000627282 CFAP53Q96M91 514 aa25.56■■□□□ 1.68
CNOT9-209ENST00000627282 EYA1Q99502 592 aa25.56■■□□□ 1.68
CNOT9-209ENST00000627282 DIAPH1O60610 1272 aaKnown RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms