RNA–Protein interactions for RNA: ENST00000627212.2

RAPGEF6-215, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-215ENST00000627212 C9orf84Q5VXU9 1444 aa11.88□□□□□ -0.51
RAPGEF6-215ENST00000627212 MTERF4Q7Z6M4 381 aaKnown RBP11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 CCDC112Q8NEF3 446 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 SLC26A8Q96RN1 970 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 PRXQ9BXM0 1461 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 F6X3S4 739 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 SERPINC1P01008 464 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 ZSCAN30Q86W11 494 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 NOL10Q9BSC4 688 aaKnown RBP11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 AACSQ86V21 672 aa11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 TNPO1Q92973 898 aaKnown RBP11.87□□□□□ -0.51
RAPGEF6-215ENST00000627212 OFD1O75665 1012 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 ESCO1Q5FWF5 840 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 BLOC1S2Q6QNY1 142 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 LETM1O95202 739 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 CCT4P50991 539 aaKnown RBP11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 AMOTL1Q8IY63 956 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 CCDC83Q8IWF9 413 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 SPATA32Q96LK8 384 aa11.86□□□□□ -0.51
RAPGEF6-215ENST00000627212 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF6-215ENST00000627212 TSHZ3Q63HK5 1081 aa11.85□□□□□ -0.51
RAPGEF6-215ENST00000627212 FKBP4Q02790 459 aaKnown RBP eCLIP11.85□□□□□ -0.51
RAPGEF6-215ENST00000627212 PDRG1Q9NUG6 133 aa11.85□□□□□ -0.51
RAPGEF6-215ENST00000627212 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
RAPGEF6-215ENST00000627212 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 RAPGEF3O95398 923 aa11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 CASTP20810 708 aaKnown RBP11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 ARHGAP5Q13017 1502 aa11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 TRIM27P14373 513 aa11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 FBLN1P23142 703 aa11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 DHX37Q8IY37 1157 aaKnown RBP11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 NUP62CLQ9H1M0 184 aa11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
RAPGEF6-215ENST00000627212 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 PANK2Q9BZ23 570 aa11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 USP25Q9UHP3 1055 aa11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 WAPLQ7Z5K2 1190 aa11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 NFE2L2Q16236 605 aa11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 CT47B1P0C2W7 299 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 CBX1P83916 185 aa11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 AXDND1Q5T1B0 1012 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 RPAP2Q8IXW5 612 aaPredicted RBP11.83□□□□□ -0.52
RAPGEF6-215ENST00000627212 H0YHG0 523 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 FCHSD2O94868 740 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 PLEKHO1Q53GL0 409 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 ZNF396Q96N95 335 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 TCEAL9Q9UHQ7 104 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 PRPF40BQ6NWY9 871 aaKnown RBP11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 TBC1D2BQ9UPU7 963 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 ANKRD30BQ9BXX2 1392 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 PIBF1Q8WXW3 757 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
RAPGEF6-215ENST00000627212 RRP9O43818 475 aaKnown RBP11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 GUCY1B3Q02153 619 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 NUP133Q8WUM0 1156 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 DAPK1P53355 1430 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 AK7Q96M32 723 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 SART3Q15020 963 aaKnown RBP11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 BOLA2Q9H3K6 86 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 ACBD3Q9H3P7 528 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
RAPGEF6-215ENST00000627212 HIP1O00291 1037 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 XBP1P17861 261 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 ERICH3Q5RHP9 1530 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 MX1P20591 662 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 ERC1Q8IUD2 1116 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 TFIP11Q9UBB9 837 aaKnown RBP11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 PCDHB15Q9Y5E8 787 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 CT47A1Q5JQC4 288 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 ZFYVE27Q5T4F4 411 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 TNNQ9UQP3 1299 aa11.8□□□□□ -0.52
RAPGEF6-215ENST00000627212 FILIP1LQ4L180 1135 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 TTC39AQ5SRH9 613 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 PDCL2Q8N4E4 241 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 NESP48681 1621 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 ATF3P18847 181 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 EPS15P42566 896 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 CCDC66A2RUB6 948 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 CCDC158Q5M9N0 1113 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 NME9Q86XW9 330 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
RAPGEF6-215ENST00000627212 CCDC82Q8N4S0 544 aa11.78□□□□□ -0.52
RAPGEF6-215ENST00000627212 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
RAPGEF6-215ENST00000627212 CCDC43Q96MW1 224 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms