RNA–Protein interactions for RNA: ENST00000627200.1

CHD2-210, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-210ENST00000627200 USP54Q70EL1 1684 aa13.37□□□□□ -0.27
CHD2-210ENST00000627200 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
CHD2-210ENST00000627200 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
CHD2-210ENST00000627200 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
CHD2-210ENST00000627200 NME9Q86XW9 330 aa13.37□□□□□ -0.27
CHD2-210ENST00000627200 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
CHD2-210ENST00000627200 ZNF692Q9BU19 519 aaPredicted RBP13.37□□□□□ -0.27
CHD2-210ENST00000627200 WDR17Q8IZU2 1322 aa13.37□□□□□ -0.27
CHD2-210ENST00000627200 APBA3O96018 575 aa13.36□□□□□ -0.27
CHD2-210ENST00000627200 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
CHD2-210ENST00000627200 CAMKK2Q96RR4 588 aa13.36□□□□□ -0.27
CHD2-210ENST00000627200 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
CHD2-210ENST00000627200 LTN1O94822 1766 aa13.35□□□□□ -0.27
CHD2-210ENST00000627200 A0A1W2PP64 1363 aa13.35□□□□□ -0.27
CHD2-210ENST00000627200 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
CHD2-210ENST00000627200 OVOS2A0A0G2JMS6 1433 aa13.34□□□□□ -0.27
CHD2-210ENST00000627200 OVOS2A0A0J9YW53 1432 aa13.34□□□□□ -0.27
CHD2-210ENST00000627200 OVOS2Q6IE36 1432 aa13.34□□□□□ -0.27
CHD2-210ENST00000627200 TRIM26Q12899 539 aaPredicted RBP13.34□□□□□ -0.27
CHD2-210ENST00000627200 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
CHD2-210ENST00000627200 USP31Q70CQ4 1352 aa13.33□□□□□ -0.27
CHD2-210ENST00000627200 CSB-PGBD3P0DP91 1061 aa13.33□□□□□ -0.28
CHD2-210ENST00000627200 PTF1AQ7RTS3 328 aa13.33□□□□□ -0.28
CHD2-210ENST00000627200 TESK2Q96S53 571 aa13.33□□□□□ -0.28
CHD2-210ENST00000627200 ABCC6O95255 1503 aa13.33□□□□□ -0.28
CHD2-210ENST00000627200 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
CHD2-210ENST00000627200 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
CHD2-210ENST00000627200 DDB1Q16531 1140 aa13.32□□□□□ -0.28
CHD2-210ENST00000627200 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
CHD2-210ENST00000627200 HDGFL2Q7Z4V5 671 aaPredicted RBP13.31□□□□□ -0.28
CHD2-210ENST00000627200 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
CHD2-210ENST00000627200 CARD10Q9BWT7 1032 aa13.3□□□□□ -0.28
CHD2-210ENST00000627200 ERBB3P21860 1342 aa13.29□□□□□ -0.28
CHD2-210ENST00000627200 RGPD3A6NKT7 1758 aaPredicted RBP13.29□□□□□ -0.28
CHD2-210ENST00000627200 RGPD4Q7Z3J3 1758 aa13.29□□□□□ -0.28
CHD2-210ENST00000627200 TNS2Q63HR2 1409 aa13.29□□□□□ -0.28
CHD2-210ENST00000627200 TERF2IPQ9NYB0 399 aa13.28□□□□□ -0.28
CHD2-210ENST00000627200 USP47Q96K76 1375 aa13.28□□□□□ -0.28
CHD2-210ENST00000627200 CCDC7Q96M83 1385 aa13.27□□□□□ -0.29
CHD2-210ENST00000627200 CDCA7Q9BWT1 371 aaPredicted RBP13.26□□□□□ -0.29
CHD2-210ENST00000627200 NLRP2Q9NX02 1062 aa13.26□□□□□ -0.29
CHD2-210ENST00000627200 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
CHD2-210ENST00000627200 BCL9O00512 1426 aa13.25□□□□□ -0.29
CHD2-210ENST00000627200 FBLN1P23142 703 aa13.25□□□□□ -0.29
CHD2-210ENST00000627200 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
CHD2-210ENST00000627200 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
CHD2-210ENST00000627200 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
CHD2-210ENST00000627200 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
CHD2-210ENST00000627200 ANKRD36BQ8N2N9 1353 aa13.24□□□□□ -0.29
CHD2-210ENST00000627200 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
CHD2-210ENST00000627200 C11orf95C9JLR9 678 aaPredicted RBP13.23□□□□□ -0.29
CHD2-210ENST00000627200 EXOC5O00471 708 aa13.23□□□□□ -0.29
CHD2-210ENST00000627200 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
CHD2-210ENST00000627200 MYOM1P52179 1685 aa13.23□□□□□ -0.29
CHD2-210ENST00000627200 FAM208AQ9UK61 1670 aaKnown RBP13.22□□□□□ -0.29
CHD2-210ENST00000627200 MAP3K19Q56UN5 1328 aa13.22□□□□□ -0.29
CHD2-210ENST00000627200 KCNQ2O43526 872 aa13.22□□□□□ -0.29
CHD2-210ENST00000627200 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
CHD2-210ENST00000627200 PROM2Q8N271 834 aa13.22□□□□□ -0.29
CHD2-210ENST00000627200 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
CHD2-210ENST00000627200 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
CHD2-210ENST00000627200 PLSCR1O15162 318 aa13.21□□□□□ -0.29
CHD2-210ENST00000627200 IL2RBP14784 551 aa13.21□□□□□ -0.29
CHD2-210ENST00000627200 ACSBG1Q96GR2 724 aa13.21□□□□□ -0.29
CHD2-210ENST00000627200 COG3Q96JB2 828 aa13.21□□□□□ -0.29
CHD2-210ENST00000627200 KIF20BQ96Q89 1820 aa13.2□□□□□ -0.3
CHD2-210ENST00000627200 TMF1P82094 1093 aa13.2□□□□□ -0.3
CHD2-210ENST00000627200 IP6K1Q92551 441 aa13.2□□□□□ -0.3
CHD2-210ENST00000627200 PCGF6Q9BYE7 350 aa13.2□□□□□ -0.3
CHD2-210ENST00000627200 PDGFDQ9GZP0 370 aaPredicted RBP13.2□□□□□ -0.3
CHD2-210ENST00000627200 BTAF1O14981 1849 aa13.2□□□□□ -0.3
CHD2-210ENST00000627200 HOXC9P31274 260 aa13.19□□□□□ -0.3
CHD2-210ENST00000627200 RRS1Q15050 365 aaKnown RBP13.19□□□□□ -0.3
CHD2-210ENST00000627200 GGNBP2Q9H3C7 697 aa13.19□□□□□ -0.3
CHD2-210ENST00000627200 SHANK3Q9BYB0 1731 aa13.19□□□□□ -0.3
CHD2-210ENST00000627200 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
CHD2-210ENST00000627200 MEGF6O75095 1541 aa13.18□□□□□ -0.3
CHD2-210ENST00000627200 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
CHD2-210ENST00000627200 DOT1LQ8TEK3 1739 aa13.17□□□□□ -0.3
CHD2-210ENST00000627200 FYB1O15117 783 aa13.17□□□□□ -0.3
CHD2-210ENST00000627200 AMPHP49418 695 aa13.17□□□□□ -0.3
CHD2-210ENST00000627200 RTL1A6NKG5 1358 aa13.16□□□□□ -0.3
CHD2-210ENST00000627200 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
CHD2-210ENST00000627200 SLC24A1O60721 1099 aa13.15□□□□□ -0.3
CHD2-210ENST00000627200 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
CHD2-210ENST00000627200 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
CHD2-210ENST00000627200 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
CHD2-210ENST00000627200 SPON1Q9HCB6 807 aa13.15□□□□□ -0.3
CHD2-210ENST00000627200 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
CHD2-210ENST00000627200 PPP1R1BQ9UD71 204 aaPredicted RBP13.13□□□□□ -0.31
CHD2-210ENST00000627200 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
CHD2-210ENST00000627200 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
CHD2-210ENST00000627200 STK32BQ9NY57 414 aa13.12□□□□□ -0.31
CHD2-210ENST00000627200 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
CHD2-210ENST00000627200 NSD2O96028 1365 aa13.11□□□□□ -0.31
CHD2-210ENST00000627200 SLC15A2Q16348 729 aa13.11□□□□□ -0.31
CHD2-210ENST00000627200 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
CHD2-210ENST00000627200 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
CHD2-210ENST00000627200 HSP90AB2PQ58FF8 381 aa13.11□□□□□ -0.31
CHD2-210ENST00000627200 LRRC4BQ9NT99 713 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms