RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 PEAK1Q9H792 1746 aa11.54□□□□□ -0.56
SGMS1-211ENST00000626236 RGPD5Q99666 1765 aa11.54□□□□□ -0.56
SGMS1-211ENST00000626236 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
SGMS1-211ENST00000626236 NUTM2BA6NNL0 878 aaPredicted RBP11.53□□□□□ -0.56
SGMS1-211ENST00000626236 NUTM2EB1AL46 878 aaPredicted RBP11.53□□□□□ -0.56
SGMS1-211ENST00000626236 NUTM2AQ8IVF1 878 aaPredicted RBP11.53□□□□□ -0.56
SGMS1-211ENST00000626236 AATKQ6ZMQ8 1374 aa11.53□□□□□ -0.56
SGMS1-211ENST00000626236 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
SGMS1-211ENST00000626236 ZC3H6P61129 1189 aaKnown RBP11.52□□□□□ -0.57
SGMS1-211ENST00000626236 RRS1Q15050 365 aaKnown RBP11.52□□□□□ -0.57
SGMS1-211ENST00000626236 SPATA31A6Q5VVP1 1343 aa11.52□□□□□ -0.57
SGMS1-211ENST00000626236 PLCH1Q4KWH8 1693 aa11.52□□□□□ -0.57
SGMS1-211ENST00000626236 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
SGMS1-211ENST00000626236 LRP6O75581 1613 aa11.51□□□□□ -0.57
SGMS1-211ENST00000626236 PPM1GO15355 546 aaPredicted RBP11.51□□□□□ -0.57
SGMS1-211ENST00000626236 EMILIN1Q9Y6C2 1016 aa11.51□□□□□ -0.57
SGMS1-211ENST00000626236 MAP3K19Q56UN5 1328 aa11.51□□□□□ -0.57
SGMS1-211ENST00000626236 MYBBP1AQ9BQG0 1328 aaKnown RBP11.51□□□□□ -0.57
SGMS1-211ENST00000626236 KIAA0232Q92628 1395 aa11.51□□□□□ -0.57
SGMS1-211ENST00000626236 COL18A1P39060 1754 aa11.51□□□□□ -0.57
SGMS1-211ENST00000626236 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
SGMS1-211ENST00000626236 ADAMTS2O95450 1211 aa11.5□□□□□ -0.57
SGMS1-211ENST00000626236 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
SGMS1-211ENST00000626236 CPDO75976 1380 aa11.5□□□□□ -0.57
SGMS1-211ENST00000626236 LMO7Q8WWI1 1683 aa11.49□□□□□ -0.57
SGMS1-211ENST00000626236 AMPHP49418 695 aa11.49□□□□□ -0.57
SGMS1-211ENST00000626236 CHRNA2Q15822 529 aa11.49□□□□□ -0.57
SGMS1-211ENST00000626236 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
SGMS1-211ENST00000626236 PRDM11Q9NQV5 511 aa11.49□□□□□ -0.57
SGMS1-211ENST00000626236 RTL1A6NKG5 1358 aa11.49□□□□□ -0.57
SGMS1-211ENST00000626236 CDK12Q9NYV4 1490 aaPredicted RBP11.49□□□□□ -0.57
SGMS1-211ENST00000626236 ABCC6O95255 1503 aa11.49□□□□□ -0.57
SGMS1-211ENST00000626236 MTHFSP49914 203 aa11.48□□□□□ -0.57
SGMS1-211ENST00000626236 MIER1Q8N108 512 aa11.48□□□□□ -0.57
SGMS1-211ENST00000626236 FLT4P35916 1363 aa11.48□□□□□ -0.57
SGMS1-211ENST00000626236 NWD2Q9ULI1 1742 aa11.48□□□□□ -0.57
SGMS1-211ENST00000626236 KIF24Q5T7B8 1368 aa11.47□□□□□ -0.57
SGMS1-211ENST00000626236 FAM83GA6ND36 823 aa11.47□□□□□ -0.57
SGMS1-211ENST00000626236 HOXC9P31274 260 aa11.47□□□□□ -0.57
SGMS1-211ENST00000626236 MEX3CQ5U5Q3 659 aaKnown RBP11.47□□□□□ -0.57
SGMS1-211ENST00000626236 RGPD2P0DJD1 1756 aa11.46□□□□□ -0.57
SGMS1-211ENST00000626236 NRAPQ86VF7 1730 aa11.46□□□□□ -0.57
SGMS1-211ENST00000626236 ILDR1Q86SU0 546 aaPredicted RBP11.46□□□□□ -0.57
SGMS1-211ENST00000626236 IP6K1Q92551 441 aa11.46□□□□□ -0.57
SGMS1-211ENST00000626236 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
SGMS1-211ENST00000626236 C8orf37Q96NL8 207 aa11.46□□□□□ -0.57
SGMS1-211ENST00000626236 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.57
SGMS1-211ENST00000626236 FAM208AQ9UK61 1670 aaKnown RBP11.46□□□□□ -0.58
SGMS1-211ENST00000626236 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.58
SGMS1-211ENST00000626236 COL3A1P02461 1466 aaPredicted RBP11.45□□□□□ -0.58
SGMS1-211ENST00000626236 BLMP54132 1417 aaPredicted RBP11.45□□□□□ -0.58
SGMS1-211ENST00000626236 HSP90AB2PQ58FF8 381 aa11.45□□□□□ -0.58
SGMS1-211ENST00000626236 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
SGMS1-211ENST00000626236 INSRP06213 1382 aa11.44□□□□□ -0.58
SGMS1-211ENST00000626236 LTV1Q96GA3 475 aaPredicted RBP11.44□□□□□ -0.58
SGMS1-211ENST00000626236 BTG4Q9NY30 223 aa11.44□□□□□ -0.58
SGMS1-211ENST00000626236 COL5A2P05997 1499 aaPredicted RBP11.44□□□□□ -0.58
SGMS1-211ENST00000626236 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.43□□□□□ -0.58
SGMS1-211ENST00000626236 ANKRD24Q8TF21 1146 aa11.43□□□□□ -0.58
SGMS1-211ENST00000626236 NGLY1Q96IV0 654 aa11.43□□□□□ -0.58
SGMS1-211ENST00000626236 SLIT2O94813 1529 aa11.43□□□□□ -0.58
SGMS1-211ENST00000626236 RGPD1P0DJD0 1748 aa11.43□□□□□ -0.58
SGMS1-211ENST00000626236 DIAPH1O60610 1272 aaKnown RBP11.42□□□□□ -0.58
SGMS1-211ENST00000626236 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
SGMS1-211ENST00000626236 CCDC184Q52MB2 194 aa11.42□□□□□ -0.58
SGMS1-211ENST00000626236 MRS2Q9HD23 443 aa11.42□□□□□ -0.58
SGMS1-211ENST00000626236 STRN4Q9NRL3 753 aa11.42□□□□□ -0.58
SGMS1-211ENST00000626236 ERBB3P21860 1342 aa11.41□□□□□ -0.58
SGMS1-211ENST00000626236 CCER2I3L3R5 266 aa11.41□□□□□ -0.58
SGMS1-211ENST00000626236 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
SGMS1-211ENST00000626236 EVA1CP58658 441 aa11.41□□□□□ -0.58
SGMS1-211ENST00000626236 IL13P35225 146 aa11.4□□□□□ -0.58
SGMS1-211ENST00000626236 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
SGMS1-211ENST00000626236 AFF2P51816 1311 aa11.39□□□□□ -0.59
SGMS1-211ENST00000626236 WDR17Q8IZU2 1322 aa11.39□□□□□ -0.59
SGMS1-211ENST00000626236 BCL9LQ86UU0 1499 aa11.39□□□□□ -0.59
SGMS1-211ENST00000626236 U2SURPO15042 1029 aaKnown RBP11.39□□□□□ -0.59
SGMS1-211ENST00000626236 FNBP4Q8N3X1 1017 aaPredicted RBP11.39□□□□□ -0.59
SGMS1-211ENST00000626236 USP21Q9UK80 565 aa11.39□□□□□ -0.59
SGMS1-211ENST00000626236 NUDCQ9Y266 331 aa11.39□□□□□ -0.59
SGMS1-211ENST00000626236 CRB1P82279 1406 aa11.38□□□□□ -0.59
SGMS1-211ENST00000626236 WDR43Q15061 677 aaKnown RBP eCLIP11.38□□□□□ -0.59
SGMS1-211ENST00000626236 LARP1Q6PKG0 1096 aaKnown RBP11.38□□□□□ -0.59
SGMS1-211ENST00000626236 TOM1L2Q6ZVM7 507 aa11.38□□□□□ -0.59
SGMS1-211ENST00000626236 UNC5CLQ8IV45 518 aa11.38□□□□□ -0.59
SGMS1-211ENST00000626236 NLRP2Q9NX02 1062 aa11.38□□□□□ -0.59
SGMS1-211ENST00000626236 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
SGMS1-211ENST00000626236 USHBP1Q8N6Y0 703 aa11.37□□□□□ -0.59
SGMS1-211ENST00000626236 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
SGMS1-211ENST00000626236 EYA1Q99502 592 aa11.37□□□□□ -0.59
SGMS1-211ENST00000626236 IGSF1Q8N6C5 1336 aa11.36□□□□□ -0.59
SGMS1-211ENST00000626236 PARP4Q9UKK3 1724 aaKnown RBP11.36□□□□□ -0.59
SGMS1-211ENST00000626236 U2AF1L5P0DN76 240 aaPredicted RBP11.36□□□□□ -0.59
SGMS1-211ENST00000626236 U2AF1Q01081 240 aaKnown RBP eCLIP11.36□□□□□ -0.59
SGMS1-211ENST00000626236 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
SGMS1-211ENST00000626236 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
SGMS1-211ENST00000626236 HMOX1P09601 288 aa11.35□□□□□ -0.59
SGMS1-211ENST00000626236 SULT6B1Q6IMI4 303 aa11.35□□□□□ -0.59
SGMS1-211ENST00000626236 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
SGMS1-211ENST00000626236 PNISRQ8TF01 805 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms