RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 UTRNP46939 3433 aa22.53■■□□□ 1.2
CHRNA4-208ENST00000626188 SRPK2P78362 688 aaKnown RBP22.52■■□□□ 1.2
CHRNA4-208ENST00000626188 TXNRD1Q16881 649 aa22.52■■□□□ 1.2
CHRNA4-208ENST00000626188 SLC15A2Q16348 729 aa22.51■■□□□ 1.19
CHRNA4-208ENST00000626188 MARCH10Q8NA82 808 aaPredicted RBP22.51■■□□□ 1.19
CHRNA4-208ENST00000626188 MTFR1LQ9H019 292 aa22.51■■□□□ 1.19
CHRNA4-208ENST00000626188 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
CHRNA4-208ENST00000626188 PPIP5K1Q6PFW1 1433 aa22.5■■□□□ 1.19
CHRNA4-208ENST00000626188 NLRP6P59044 892 aa22.5■■□□□ 1.19
CHRNA4-208ENST00000626188 CDCA7Q9BWT1 371 aaPredicted RBP22.49■■□□□ 1.19
CHRNA4-208ENST00000626188 BRD4O60885 1362 aaPredicted RBP22.47■■□□□ 1.19
CHRNA4-208ENST00000626188 RAB3GAP2Q9H2M9 1393 aa22.47■■□□□ 1.19
CHRNA4-208ENST00000626188 WDR17Q8IZU2 1322 aa22.46■■□□□ 1.19
CHRNA4-208ENST00000626188 BCL9O00512 1426 aa22.46■■□□□ 1.19
CHRNA4-208ENST00000626188 CSB-PGBD3P0DP91 1061 aa22.45■■□□□ 1.18
CHRNA4-208ENST00000626188 ARXQ96QS3 562 aa22.45■■□□□ 1.18
CHRNA4-208ENST00000626188 CABP2Q9NPB3 220 aa22.45■■□□□ 1.18
CHRNA4-208ENST00000626188 AKAP12Q02952 1782 aa22.44■■□□□ 1.18
CHRNA4-208ENST00000626188 CHD4Q14839 1912 aa22.44■■□□□ 1.18
CHRNA4-208ENST00000626188 IFFO2Q5TF58 517 aa22.44■■□□□ 1.18
CHRNA4-208ENST00000626188 EXOC5O00471 708 aa22.43■■□□□ 1.18
CHRNA4-208ENST00000626188 SGIP1Q9BQI5 828 aa22.43■■□□□ 1.18
CHRNA4-208ENST00000626188 AXIN2Q9Y2T1 843 aa22.43■■□□□ 1.18
CHRNA4-208ENST00000626188 GPR162Q16538 588 aa22.42■■□□□ 1.18
CHRNA4-208ENST00000626188 SLIT3O75094 1523 aa22.41■■□□□ 1.18
CHRNA4-208ENST00000626188 USP6P35125 1406 aa22.41■■□□□ 1.18
CHRNA4-208ENST00000626188 WNK3Q9BYP7 1800 aa22.41■■□□□ 1.18
CHRNA4-208ENST00000626188 GIGYF1O75420 1035 aaPredicted RBP22.4■■□□□ 1.18
CHRNA4-208ENST00000626188 CABP1Q9NZU7 370 aa22.4■■□□□ 1.18
CHRNA4-208ENST00000626188 CARD10Q9BWT7 1032 aa22.39■■□□□ 1.17
CHRNA4-208ENST00000626188 CPSF1Q10570 1443 aaKnown RBP22.39■■□□□ 1.17
CHRNA4-208ENST00000626188 CENPJQ9HC77 1338 aaPredicted RBP22.38■■□□□ 1.17
CHRNA4-208ENST00000626188 SOX12O15370 315 aa22.38■■□□□ 1.17
CHRNA4-208ENST00000626188 KLHL34Q8N239 644 aa22.37■■□□□ 1.17
CHRNA4-208ENST00000626188 COL18A1P39060 1754 aa22.36■■□□□ 1.17
CHRNA4-208ENST00000626188 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
CHRNA4-208ENST00000626188 KCNH5Q8NCM2 988 aa22.36■■□□□ 1.17
CHRNA4-208ENST00000626188 ACSBG1Q96GR2 724 aa22.36■■□□□ 1.17
CHRNA4-208ENST00000626188 MAP3K5Q99683 1374 aa22.36■■□□□ 1.17
CHRNA4-208ENST00000626188 NBPF1Q3BBV0 1214 aa22.35■■□□□ 1.17
CHRNA4-208ENST00000626188 ARHGEF25Q86VW2 580 aa22.35■■□□□ 1.17
CHRNA4-208ENST00000626188 CCDC7Q96M83 1385 aa22.34■■□□□ 1.17
CHRNA4-208ENST00000626188 TNS2Q63HR2 1409 aa22.32■■□□□ 1.16
CHRNA4-208ENST00000626188 KIAA1210Q9ULL0 1709 aa22.32■■□□□ 1.16
CHRNA4-208ENST00000626188 PIK3C2AO00443 1686 aa22.32■■□□□ 1.16
CHRNA4-208ENST00000626188 POLD1P28340 1107 aa22.31■■□□□ 1.16
CHRNA4-208ENST00000626188 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
CHRNA4-208ENST00000626188 ZNF827Q17R98 1081 aa22.29■■□□□ 1.16
CHRNA4-208ENST00000626188 QRICH2Q9H0J4 1663 aa22.29■■□□□ 1.16
CHRNA4-208ENST00000626188 RGPD5Q99666 1765 aa22.28■■□□□ 1.16
CHRNA4-208ENST00000626188 TTC21BQ7Z4L5 1316 aa22.28■■□□□ 1.16
CHRNA4-208ENST00000626188 PAPPAQ13219 1627 aa22.27■■□□□ 1.16
CHRNA4-208ENST00000626188 SLC16A10Q8TF71 515 aa22.26■■□□□ 1.15
CHRNA4-208ENST00000626188 ZNF692Q9BU19 519 aaPredicted RBP22.26■■□□□ 1.15
CHRNA4-208ENST00000626188 TRPM1Q7Z4N2 1603 aa22.26■■□□□ 1.15
CHRNA4-208ENST00000626188 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
CHRNA4-208ENST00000626188 EVC2Q86UK5 1308 aa22.25■■□□□ 1.15
CHRNA4-208ENST00000626188 LRRC4BQ9NT99 713 aa22.24■■□□□ 1.15
CHRNA4-208ENST00000626188 ABCC6O95255 1503 aa22.24■■□□□ 1.15
CHRNA4-208ENST00000626188 IL2RBP14784 551 aa22.23■■□□□ 1.15
CHRNA4-208ENST00000626188 TTC21AQ8NDW8 1320 aa22.23■■□□□ 1.15
CHRNA4-208ENST00000626188 CEP350Q5VT06 3117 aa22.22■■□□□ 1.15
CHRNA4-208ENST00000626188 BTAF1O14981 1849 aa22.21■■□□□ 1.15
CHRNA4-208ENST00000626188 NLGN2Q8NFZ4 835 aa22.2■■□□□ 1.14
CHRNA4-208ENST00000626188 AKT1S1Q96B36 256 aa22.2■■□□□ 1.14
CHRNA4-208ENST00000626188 TFCP2L1Q9NZI6 479 aa22.2■■□□□ 1.14
CHRNA4-208ENST00000626188 NFAT5O94916 1531 aa22.2■■□□□ 1.14
CHRNA4-208ENST00000626188 SLC27A3Q5K4L6 730 aa22.19■■□□□ 1.14
CHRNA4-208ENST00000626188 ERBB3P21860 1342 aa22.19■■□□□ 1.14
CHRNA4-208ENST00000626188 GOLGB1Q14789 3259 aaKnown RBP22.19■■□□□ 1.14
CHRNA4-208ENST00000626188 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
CHRNA4-208ENST00000626188 PNPLA7Q6ZV29 1317 aa22.18■■□□□ 1.14
CHRNA4-208ENST00000626188 GRIN3BO60391 1043 aa22.18■■□□□ 1.14
CHRNA4-208ENST00000626188 KTN1Q86UP2 1357 aaKnown RBP22.17■■□□□ 1.14
CHRNA4-208ENST00000626188 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
CHRNA4-208ENST00000626188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
CHRNA4-208ENST00000626188 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
CHRNA4-208ENST00000626188 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.13
CHRNA4-208ENST00000626188 MSH5O43196 834 aa22.13■■□□□ 1.13
CHRNA4-208ENST00000626188 YBX3P16989 372 aaKnown RBP eCLIP22.13■■□□□ 1.13
CHRNA4-208ENST00000626188 KCNQ4P56696 695 aa22.13■■□□□ 1.13
CHRNA4-208ENST00000626188 DDX54Q8TDD1 881 aaKnown RBP22.13■■□□□ 1.13
CHRNA4-208ENST00000626188 QSER1Q2KHR3 1735 aa22.11■■□□□ 1.13
CHRNA4-208ENST00000626188 GPBP1L1Q9HC44 474 aaPredicted RBP22.1■■□□□ 1.13
CHRNA4-208ENST00000626188 ATP10DQ9P241 1426 aa22.1■■□□□ 1.13
CHRNA4-208ENST00000626188 COL24A1Q17RW2 1714 aa22.09■■□□□ 1.13
CHRNA4-208ENST00000626188 NME9Q86XW9 330 aa22.07■■□□□ 1.12
CHRNA4-208ENST00000626188 USP31Q70CQ4 1352 aa22.07■■□□□ 1.12
CHRNA4-208ENST00000626188 PRIM1P49642 420 aaKnown RBP22.06■■□□□ 1.12
CHRNA4-208ENST00000626188 HSPA6P17066 643 aa22.05■■□□□ 1.12
CHRNA4-208ENST00000626188 ZNF526Q8TF50 670 aaPredicted RBP22.05■■□□□ 1.12
CHRNA4-208ENST00000626188 CCNL1Q9UK58 526 aaPredicted RBP22.05■■□□□ 1.12
CHRNA4-208ENST00000626188 LTN1O94822 1766 aa22.04■■□□□ 1.12
CHRNA4-208ENST00000626188 TUBGCP6Q96RT7 1819 aa22.04■■□□□ 1.12
CHRNA4-208ENST00000626188 ANKRD36BQ8N2N9 1353 aa22.03■■□□□ 1.12
CHRNA4-208ENST00000626188 MSL1Q68DK7 614 aa22.03■■□□□ 1.12
CHRNA4-208ENST00000626188 LTV1Q96GA3 475 aaPredicted RBP22.03■■□□□ 1.12
CHRNA4-208ENST00000626188 COL23A1Q86Y22 540 aaPredicted RBP22.02■■□□□ 1.12
CHRNA4-208ENST00000626188 MON2Q7Z3U7 1717 aa22.02■■□□□ 1.12
CHRNA4-208ENST00000626188 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms