RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 NEUROD2Q15784 382 aa17.02■□□□□ 0.32
SPTAN1-211ENST00000625980 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
SPTAN1-211ENST00000625980 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
SPTAN1-211ENST00000625980 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.31
SPTAN1-211ENST00000625980 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
SPTAN1-211ENST00000625980 IP6K1Q92551 441 aa17.01■□□□□ 0.31
SPTAN1-211ENST00000625980 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
SPTAN1-211ENST00000625980 LTN1O94822 1766 aa17.01■□□□□ 0.31
SPTAN1-211ENST00000625980 RTL1A6NKG5 1358 aa17■□□□□ 0.31
SPTAN1-211ENST00000625980 ARHGEF10O15013 1369 aa17■□□□□ 0.31
SPTAN1-211ENST00000625980 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
SPTAN1-211ENST00000625980 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
SPTAN1-211ENST00000625980 NHSL1Q5SYE7 1610 aa17■□□□□ 0.31
SPTAN1-211ENST00000625980 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
SPTAN1-211ENST00000625980 MAPK8IP3Q9UPT6 1336 aa16.99■□□□□ 0.31
SPTAN1-211ENST00000625980 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
SPTAN1-211ENST00000625980 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
SPTAN1-211ENST00000625980 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
SPTAN1-211ENST00000625980 EYA1Q99502 592 aa16.99■□□□□ 0.31
SPTAN1-211ENST00000625980 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
SPTAN1-211ENST00000625980 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
SPTAN1-211ENST00000625980 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
SPTAN1-211ENST00000625980 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
SPTAN1-211ENST00000625980 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
SPTAN1-211ENST00000625980 PHRF1Q9P1Y6 1649 aaKnown RBP16.97■□□□□ 0.31
SPTAN1-211ENST00000625980 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
SPTAN1-211ENST00000625980 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.31
SPTAN1-211ENST00000625980 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.3
SPTAN1-211ENST00000625980 GOLGA2Q08379 1002 aa16.96■□□□□ 0.3
SPTAN1-211ENST00000625980 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.3
SPTAN1-211ENST00000625980 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.3
SPTAN1-211ENST00000625980 GTF3C3Q9Y5Q9 886 aa16.95■□□□□ 0.3
SPTAN1-211ENST00000625980 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
SPTAN1-211ENST00000625980 RIPK4P57078 832 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 TOM1O60784 492 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 NEFMP07197 916 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 NFE2L2Q16236 605 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
SPTAN1-211ENST00000625980 AHDC1Q5TGY3 1603 aaPredicted RBP16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 CHRNA2Q15822 529 aa16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 NBPF6Q5VWK0 638 aa16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 ANKRD24Q8TF21 1146 aa16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 LRRC59Q96AG4 307 aaKnown RBP16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 NBPF4Q96M43 638 aa16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 SUPT16HQ9Y5B9 1047 aaKnown RBP16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 KDRP35968 1356 aa16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 KIAA0232Q92628 1395 aa16.92■□□□□ 0.3
SPTAN1-211ENST00000625980 UBAP1LF5GYI3 381 aa16.91■□□□□ 0.3
SPTAN1-211ENST00000625980 DUSP27Q5VZP5 1158 aa16.91■□□□□ 0.3
SPTAN1-211ENST00000625980 TRMT2AQ8IZ69 625 aaKnown RBP16.9■□□□□ 0.3
SPTAN1-211ENST00000625980 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
SPTAN1-211ENST00000625980 CPDO75976 1380 aa16.89■□□□□ 0.3
SPTAN1-211ENST00000625980 HAP1P54257 671 aaPredicted RBP16.89■□□□□ 0.29
SPTAN1-211ENST00000625980 COL18A1P39060 1754 aa16.89■□□□□ 0.29
SPTAN1-211ENST00000625980 E9PSI1 815 aa16.88■□□□□ 0.29
SPTAN1-211ENST00000625980 RGPD5Q99666 1765 aa16.88■□□□□ 0.29
SPTAN1-211ENST00000625980 CERKQ8TCT0 537 aa16.87■□□□□ 0.29
SPTAN1-211ENST00000625980 ERBB3P21860 1342 aa16.87■□□□□ 0.29
SPTAN1-211ENST00000625980 ABCA3Q99758 1704 aa16.87■□□□□ 0.29
SPTAN1-211ENST00000625980 RGPD2P0DJD1 1756 aa16.87■□□□□ 0.29
SPTAN1-211ENST00000625980 MTHFSDQ2M296 383 aaKnown RBP16.86■□□□□ 0.29
SPTAN1-211ENST00000625980 PRDM11Q9NQV5 511 aa16.86■□□□□ 0.29
SPTAN1-211ENST00000625980 THUMPD2Q9BTF0 503 aaKnown RBP16.85■□□□□ 0.29
SPTAN1-211ENST00000625980 PHLPP1O60346 1717 aa16.85■□□□□ 0.29
SPTAN1-211ENST00000625980 FAM83GA6ND36 823 aa16.84■□□□□ 0.29
SPTAN1-211ENST00000625980 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
SPTAN1-211ENST00000625980 ABCC6O95255 1503 aa16.83■□□□□ 0.29
SPTAN1-211ENST00000625980 NCAPD2Q15021 1401 aa16.83■□□□□ 0.28
SPTAN1-211ENST00000625980 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
SPTAN1-211ENST00000625980 RCAN3Q9UKA8 241 aa16.83■□□□□ 0.28
SPTAN1-211ENST00000625980 NLRP2Q9NX02 1062 aa16.82■□□□□ 0.28
SPTAN1-211ENST00000625980 DLG5Q8TDM6 1919 aa16.82■□□□□ 0.28
SPTAN1-211ENST00000625980 CSB-PGBD3P0DP91 1061 aa16.82■□□□□ 0.28
SPTAN1-211ENST00000625980 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
SPTAN1-211ENST00000625980 LMOD3Q0VAK6 560 aa16.81■□□□□ 0.28
SPTAN1-211ENST00000625980 TSR2Q969E8 191 aaKnown RBP16.81■□□□□ 0.28
SPTAN1-211ENST00000625980 IL16Q14005 1332 aa16.81■□□□□ 0.28
SPTAN1-211ENST00000625980 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
SPTAN1-211ENST00000625980 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
SPTAN1-211ENST00000625980 GAS2L2Q8NHY3 880 aa16.8■□□□□ 0.28
SPTAN1-211ENST00000625980 MYH16Q9H6N6 1097 aa16.8■□□□□ 0.28
SPTAN1-211ENST00000625980 LMO7Q8WWI1 1683 aa16.8■□□□□ 0.28
SPTAN1-211ENST00000625980 FKBP8Q14318 412 aa16.79■□□□□ 0.28
SPTAN1-211ENST00000625980 MCM10Q7L590 875 aa16.79■□□□□ 0.28
SPTAN1-211ENST00000625980 LAS1LQ9Y4W2 734 aaKnown RBP16.79■□□□□ 0.28
SPTAN1-211ENST00000625980 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
SPTAN1-211ENST00000625980 FANCIQ9NVI1 1328 aa16.79■□□□□ 0.28
SPTAN1-211ENST00000625980 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.28
SPTAN1-211ENST00000625980 NEFLP07196 543 aa16.77■□□□□ 0.28
SPTAN1-211ENST00000625980 FAM208AQ9UK61 1670 aaKnown RBP16.77■□□□□ 0.27
SPTAN1-211ENST00000625980 WDR17Q8IZU2 1322 aa16.76■□□□□ 0.27
SPTAN1-211ENST00000625980 ZNF853P0CG23 659 aa16.76■□□□□ 0.27
SPTAN1-211ENST00000625980 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
SPTAN1-211ENST00000625980 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
SPTAN1-211ENST00000625980 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
SPTAN1-211ENST00000625980 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms