RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 SOCS7O14512 581 aa12.71□□□□□ -0.37
NELFE-214ENST00000625905 EVA1CP58658 441 aa12.71□□□□□ -0.37
NELFE-214ENST00000625905 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.37
NELFE-214ENST00000625905 FYB1O15117 783 aa12.7□□□□□ -0.38
NELFE-214ENST00000625905 PANK3Q9H999 370 aa12.7□□□□□ -0.38
NELFE-214ENST00000625905 RGPD5Q99666 1765 aa12.7□□□□□ -0.38
NELFE-214ENST00000625905 THSD7AQ9UPZ6 1657 aa12.7□□□□□ -0.38
NELFE-214ENST00000625905 CRB1P82279 1406 aa12.7□□□□□ -0.38
NELFE-214ENST00000625905 A0A0G2JS52 829 aa12.69□□□□□ -0.38
NELFE-214ENST00000625905 MYT1Q01538 1121 aa12.69□□□□□ -0.38
NELFE-214ENST00000625905 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
NELFE-214ENST00000625905 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
NELFE-214ENST00000625905 NSD2O96028 1365 aa12.69□□□□□ -0.38
NELFE-214ENST00000625905 SPATA31A1Q5TZJ5 1347 aa12.68□□□□□ -0.38
NELFE-214ENST00000625905 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
NELFE-214ENST00000625905 WNK3Q9BYP7 1800 aa12.68□□□□□ -0.38
NELFE-214ENST00000625905 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
NELFE-214ENST00000625905 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
NELFE-214ENST00000625905 WDR17Q8IZU2 1322 aa12.67□□□□□ -0.38
NELFE-214ENST00000625905 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
NELFE-214ENST00000625905 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
NELFE-214ENST00000625905 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
NELFE-214ENST00000625905 USP35Q9P2H5 1018 aa12.67□□□□□ -0.38
NELFE-214ENST00000625905 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
NELFE-214ENST00000625905 MAP3K19Q56UN5 1328 aa12.66□□□□□ -0.38
NELFE-214ENST00000625905 TOM1L2Q6ZVM7 507 aa12.66□□□□□ -0.38
NELFE-214ENST00000625905 SEPT12Q8IYM1 358 aa12.66□□□□□ -0.38
NELFE-214ENST00000625905 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
NELFE-214ENST00000625905 ERBB3P21860 1342 aa12.65□□□□□ -0.38
NELFE-214ENST00000625905 TCP11L2Q8N4U5 519 aa12.65□□□□□ -0.38
NELFE-214ENST00000625905 KNSTRNQ9Y448 316 aa12.65□□□□□ -0.38
NELFE-214ENST00000625905 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
NELFE-214ENST00000625905 LRRC37A3O60309 1634 aa12.64□□□□□ -0.39
NELFE-214ENST00000625905 AMPHP49418 695 aa12.64□□□□□ -0.39
NELFE-214ENST00000625905 RRS1Q15050 365 aaKnown RBP12.64□□□□□ -0.39
NELFE-214ENST00000625905 BARGINQ6ZT62 677 aa12.64□□□□□ -0.39
NELFE-214ENST00000625905 PARP4Q9UKK3 1724 aaKnown RBP12.64□□□□□ -0.39
NELFE-214ENST00000625905 FLT4P35916 1363 aa12.64□□□□□ -0.39
NELFE-214ENST00000625905 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
NELFE-214ENST00000625905 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
NELFE-214ENST00000625905 FBLN1P23142 703 aa12.63□□□□□ -0.39
NELFE-214ENST00000625905 HOXC9P31274 260 aa12.63□□□□□ -0.39
NELFE-214ENST00000625905 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
NELFE-214ENST00000625905 IP6K1Q92551 441 aa12.63□□□□□ -0.39
NELFE-214ENST00000625905 THRAP3Q9Y2W1 955 aaKnown RBP12.63□□□□□ -0.39
NELFE-214ENST00000625905 KIF24Q5T7B8 1368 aa12.63□□□□□ -0.39
NELFE-214ENST00000625905 KRT27Q7Z3Y8 459 aa12.61□□□□□ -0.39
NELFE-214ENST00000625905 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
NELFE-214ENST00000625905 CARD10Q9BWT7 1032 aa12.61□□□□□ -0.39
NELFE-214ENST00000625905 NLRP2Q9NX02 1062 aa12.61□□□□□ -0.39
NELFE-214ENST00000625905 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
NELFE-214ENST00000625905 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
NELFE-214ENST00000625905 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
NELFE-214ENST00000625905 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
NELFE-214ENST00000625905 DISP2A7MBM2 1401 aa12.6□□□□□ -0.39
NELFE-214ENST00000625905 INSRP06213 1382 aa12.59□□□□□ -0.39
NELFE-214ENST00000625905 PPM1GO15355 546 aaPredicted RBP12.59□□□□□ -0.39
NELFE-214ENST00000625905 MAP2P11137 1827 aaKnown RBP12.59□□□□□ -0.39
NELFE-214ENST00000625905 TNS2Q63HR2 1409 aa12.58□□□□□ -0.4
NELFE-214ENST00000625905 CDCA7Q9BWT1 371 aaPredicted RBP12.58□□□□□ -0.4
NELFE-214ENST00000625905 RGPD2P0DJD1 1756 aa12.58□□□□□ -0.4
NELFE-214ENST00000625905 NPC1L1Q9UHC9 1359 aa12.57□□□□□ -0.4
NELFE-214ENST00000625905 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
NELFE-214ENST00000625905 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
NELFE-214ENST00000625905 CC2D1BQ5T0F9 858 aaKnown RBP12.57□□□□□ -0.4
NELFE-214ENST00000625905 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
NELFE-214ENST00000625905 PDE3BQ13370 1112 aa12.56□□□□□ -0.4
NELFE-214ENST00000625905 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
NELFE-214ENST00000625905 OVOS2A0A0G2JMS6 1433 aa12.55□□□□□ -0.4
NELFE-214ENST00000625905 RGPD1P0DJD0 1748 aa12.55□□□□□ -0.4
NELFE-214ENST00000625905 IL2RBP14784 551 aa12.55□□□□□ -0.4
NELFE-214ENST00000625905 DDB1Q16531 1140 aa12.55□□□□□ -0.4
NELFE-214ENST00000625905 CNGB1Q14028 1251 aaPredicted RBP12.54□□□□□ -0.4
NELFE-214ENST00000625905 FAM182BQ5T319 152 aa12.54□□□□□ -0.4
NELFE-214ENST00000625905 MEGF6O75095 1541 aa12.53□□□□□ -0.4
NELFE-214ENST00000625905 TNS1Q9HBL0 1735 aaKnown RBP12.53□□□□□ -0.4
NELFE-214ENST00000625905 NBPF6Q5VWK0 638 aa12.52□□□□□ -0.41
NELFE-214ENST00000625905 FAM196AQ6ZSG2 479 aa12.52□□□□□ -0.41
NELFE-214ENST00000625905 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
NELFE-214ENST00000625905 NBPF4Q96M43 638 aa12.52□□□□□ -0.41
NELFE-214ENST00000625905 NCAPD2Q15021 1401 aa12.52□□□□□ -0.41
NELFE-214ENST00000625905 EP400Q96L91 3159 aa12.51□□□□□ -0.41
NELFE-214ENST00000625905 EXOC5O00471 708 aa12.51□□□□□ -0.41
NELFE-214ENST00000625905 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
NELFE-214ENST00000625905 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
NELFE-214ENST00000625905 SHANK3Q9BYB0 1731 aa12.51□□□□□ -0.41
NELFE-214ENST00000625905 EIF4A2Q14240 407 aaKnown RBP12.5□□□□□ -0.41
NELFE-214ENST00000625905 RAPGEF4Q8WZA2 1011 aa12.5□□□□□ -0.41
NELFE-214ENST00000625905 PKD1L3Q7Z443 1732 aa12.49□□□□□ -0.41
NELFE-214ENST00000625905 BCL9O00512 1426 aa12.48□□□□□ -0.41
NELFE-214ENST00000625905 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
NELFE-214ENST00000625905 MTHFSP49914 203 aa12.48□□□□□ -0.41
NELFE-214ENST00000625905 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
NELFE-214ENST00000625905 NHSQ6T4R5 1651 aa12.48□□□□□ -0.41
NELFE-214ENST00000625905 SBF2Q86WG5 1849 aa12.47□□□□□ -0.41
NELFE-214ENST00000625905 TRIM37O94972 964 aa12.47□□□□□ -0.41
NELFE-214ENST00000625905 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
NELFE-214ENST00000625905 EYA1Q99502 592 aa12.47□□□□□ -0.41
NELFE-214ENST00000625905 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
NELFE-214ENST00000625905 DOT1LQ8TEK3 1739 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms