RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 SOX12O15370 315 aa20.67■□□□□ 0.9
TUBB3-215ENST00000625617 ARHGEF25Q86VW2 580 aa20.67■□□□□ 0.9
TUBB3-215ENST00000625617 AXIN2Q9Y2T1 843 aa20.66■□□□□ 0.9
TUBB3-215ENST00000625617 KTN1Q86UP2 1357 aaKnown RBP20.66■□□□□ 0.9
TUBB3-215ENST00000625617 SBNO2Q9Y2G9 1366 aa20.66■□□□□ 0.9
TUBB3-215ENST00000625617 PEAK1Q9H792 1746 aa20.66■□□□□ 0.9
TUBB3-215ENST00000625617 COL18A1P39060 1754 aa20.65■□□□□ 0.9
TUBB3-215ENST00000625617 CSB-PGBD3P0DP91 1061 aa20.65■□□□□ 0.9
TUBB3-215ENST00000625617 CDCA7Q9BWT1 371 aaPredicted RBP20.65■□□□□ 0.9
TUBB3-215ENST00000625617 NFAT5O94916 1531 aa20.64■□□□□ 0.9
TUBB3-215ENST00000625617 AKAP12Q02952 1782 aa20.64■□□□□ 0.89
TUBB3-215ENST00000625617 ABCC6O95255 1503 aa20.63■□□□□ 0.89
TUBB3-215ENST00000625617 CARD10Q9BWT7 1032 aa20.62■□□□□ 0.89
TUBB3-215ENST00000625617 BCL9O00512 1426 aa20.61■□□□□ 0.89
TUBB3-215ENST00000625617 WNK3Q9BYP7 1800 aa20.6■□□□□ 0.89
TUBB3-215ENST00000625617 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
TUBB3-215ENST00000625617 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
TUBB3-215ENST00000625617 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
TUBB3-215ENST00000625617 RGPD3A6NKT7 1758 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-215ENST00000625617 RGPD4Q7Z3J3 1758 aa20.59■□□□□ 0.89
TUBB3-215ENST00000625617 PLSCR1O15162 318 aa20.59■□□□□ 0.89
TUBB3-215ENST00000625617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.59■□□□□ 0.89
TUBB3-215ENST00000625617 MARCH10Q8NA82 808 aaPredicted RBP20.59■□□□□ 0.89
TUBB3-215ENST00000625617 MON2Q7Z3U7 1717 aa20.58■□□□□ 0.89
TUBB3-215ENST00000625617 TNS2Q63HR2 1409 aa20.58■□□□□ 0.88
TUBB3-215ENST00000625617 USP31Q70CQ4 1352 aa20.58■□□□□ 0.88
TUBB3-215ENST00000625617 SPON1Q9HCB6 807 aa20.57■□□□□ 0.88
TUBB3-215ENST00000625617 CD163L1Q9NR16 1453 aa20.56■□□□□ 0.88
TUBB3-215ENST00000625617 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
TUBB3-215ENST00000625617 ANO8Q9HCE9 1232 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-215ENST00000625617 PPP1R1BQ9UD71 204 aaPredicted RBP20.56■□□□□ 0.88
TUBB3-215ENST00000625617 TONSLQ96HA7 1378 aa20.56■□□□□ 0.88
TUBB3-215ENST00000625617 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
TUBB3-215ENST00000625617 NME9Q86XW9 330 aa20.55■□□□□ 0.88
TUBB3-215ENST00000625617 TMC1Q8TDI8 760 aa20.55■□□□□ 0.88
TUBB3-215ENST00000625617 ERBB3P21860 1342 aa20.54■□□□□ 0.88
TUBB3-215ENST00000625617 EXOC5O00471 708 aa20.54■□□□□ 0.88
TUBB3-215ENST00000625617 KCNQ2O43526 872 aa20.54■□□□□ 0.88
TUBB3-215ENST00000625617 EDC4Q6P2E9 1401 aaKnown RBP20.53■□□□□ 0.88
TUBB3-215ENST00000625617 USP54Q70EL1 1684 aa20.53■□□□□ 0.88
TUBB3-215ENST00000625617 SBF2Q86WG5 1849 aa20.53■□□□□ 0.88
TUBB3-215ENST00000625617 NINLQ9Y2I6 1382 aa20.51■□□□□ 0.87
TUBB3-215ENST00000625617 NLRP2Q9NX02 1062 aa20.51■□□□□ 0.87
TUBB3-215ENST00000625617 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
TUBB3-215ENST00000625617 A0A1W2PP64 1363 aa20.5■□□□□ 0.87
TUBB3-215ENST00000625617 SLC12A5Q9H2X9 1139 aa20.5■□□□□ 0.87
TUBB3-215ENST00000625617 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
TUBB3-215ENST00000625617 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
TUBB3-215ENST00000625617 PROM2Q8N271 834 aa20.48■□□□□ 0.87
TUBB3-215ENST00000625617 IL2RBP14784 551 aa20.47■□□□□ 0.87
TUBB3-215ENST00000625617 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
TUBB3-215ENST00000625617 CASZ1Q86V15 1759 aa20.46■□□□□ 0.87
TUBB3-215ENST00000625617 PUS7Q96PZ0 661 aaKnown RBP20.46■□□□□ 0.87
TUBB3-215ENST00000625617 STK32BQ9NY57 414 aa20.46■□□□□ 0.87
TUBB3-215ENST00000625617 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
TUBB3-215ENST00000625617 ACSBG1Q96GR2 724 aa20.44■□□□□ 0.86
TUBB3-215ENST00000625617 PDGFDQ9GZP0 370 aaPredicted RBP20.44■□□□□ 0.86
TUBB3-215ENST00000625617 LTN1O94822 1766 aa20.44■□□□□ 0.86
TUBB3-215ENST00000625617 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
TUBB3-215ENST00000625617 ZBTB7AO95365 584 aa20.43■□□□□ 0.86
TUBB3-215ENST00000625617 YY1P25490 414 aa20.42■□□□□ 0.86
TUBB3-215ENST00000625617 SLC15A2Q16348 729 aa20.42■□□□□ 0.86
TUBB3-215ENST00000625617 TESK2Q96S53 571 aa20.41■□□□□ 0.86
TUBB3-215ENST00000625617 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
TUBB3-215ENST00000625617 IP6K1Q92551 441 aa20.39■□□□□ 0.85
TUBB3-215ENST00000625617 PTGER2P43116 358 aa20.38■□□□□ 0.85
TUBB3-215ENST00000625617 COG3Q96JB2 828 aa20.38■□□□□ 0.85
TUBB3-215ENST00000625617 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
TUBB3-215ENST00000625617 LTV1Q96GA3 475 aaPredicted RBP20.37■□□□□ 0.85
TUBB3-215ENST00000625617 ATF5Q9Y2D1 282 aaPredicted RBP20.37■□□□□ 0.85
TUBB3-215ENST00000625617 MYOM1P52179 1685 aa20.37■□□□□ 0.85
TUBB3-215ENST00000625617 PAPPAQ13219 1627 aa20.36■□□□□ 0.85
TUBB3-215ENST00000625617 MTFR1LQ9H019 292 aa20.36■□□□□ 0.85
TUBB3-215ENST00000625617 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
TUBB3-215ENST00000625617 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
TUBB3-215ENST00000625617 MAP3K19Q56UN5 1328 aa20.35■□□□□ 0.85
TUBB3-215ENST00000625617 HOXC9P31274 260 aa20.33■□□□□ 0.85
TUBB3-215ENST00000625617 AMPHP49418 695 aa20.33■□□□□ 0.85
TUBB3-215ENST00000625617 DDX54Q8TDD1 881 aaKnown RBP20.33■□□□□ 0.85
TUBB3-215ENST00000625617 RTL1A6NKG5 1358 aa20.33■□□□□ 0.84
TUBB3-215ENST00000625617 BTAF1O14981 1849 aa20.32■□□□□ 0.84
TUBB3-215ENST00000625617 ZNF827Q17R98 1081 aa20.31■□□□□ 0.84
TUBB3-215ENST00000625617 USP47Q96K76 1375 aa20.31■□□□□ 0.84
TUBB3-215ENST00000625617 FHDC1Q9C0D6 1143 aaPredicted RBP20.3■□□□□ 0.84
TUBB3-215ENST00000625617 LRRC4BQ9NT99 713 aa20.3■□□□□ 0.84
TUBB3-215ENST00000625617 TMF1P82094 1093 aa20.29■□□□□ 0.84
TUBB3-215ENST00000625617 SGIP1Q9BQI5 828 aa20.29■□□□□ 0.84
TUBB3-215ENST00000625617 MEGF6O75095 1541 aa20.28■□□□□ 0.84
TUBB3-215ENST00000625617 FBLN1P23142 703 aa20.28■□□□□ 0.84
TUBB3-215ENST00000625617 SLC27A3Q5K4L6 730 aa20.28■□□□□ 0.84
TUBB3-215ENST00000625617 SYTL4Q96C24 671 aaPredicted RBP20.28■□□□□ 0.84
TUBB3-215ENST00000625617 SYT17Q9BSW7 474 aa20.28■□□□□ 0.84
TUBB3-215ENST00000625617 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
TUBB3-215ENST00000625617 RRS1Q15050 365 aaKnown RBP20.26■□□□□ 0.83
TUBB3-215ENST00000625617 ZCRB1Q8TBF4 217 aaKnown RBP20.26■□□□□ 0.83
TUBB3-215ENST00000625617 GGNBP2Q9H3C7 697 aa20.26■□□□□ 0.83
TUBB3-215ENST00000625617 PRIM1P49642 420 aaKnown RBP20.25■□□□□ 0.83
TUBB3-215ENST00000625617 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
TUBB3-215ENST00000625617 ARXQ96QS3 562 aa20.25■□□□□ 0.83
TUBB3-215ENST00000625617 NSD2O96028 1365 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms