RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	SLIT3	O75094	1523 aa		21.04	■□□□□ 0.96
PPA1-206	ENST00000625364	BRD4	O60885	1362 aa	Predicted RBP	21.04	■□□□□ 0.96
PPA1-206	ENST00000625364	KIAA1210	Q9ULL0	1709 aa		21.04	■□□□□ 0.96
PPA1-206	ENST00000625364	SRPK2	P78362	688 aa	Known RBP	21.03	■□□□□ 0.96
PPA1-206	ENST00000625364	PROM2	Q8N271	834 aa		21.03	■□□□□ 0.96
PPA1-206	ENST00000625364	ATF5	Q9Y2D1	282 aa	Predicted RBP	21.03	■□□□□ 0.96
PPA1-206	ENST00000625364	BCL9	O00512	1426 aa		21.03	■□□□□ 0.96
PPA1-206	ENST00000625364	STK32B	Q9NY57	414 aa		21.02	■□□□□ 0.96
PPA1-206	ENST00000625364	COL18A1	P39060	1754 aa		21.02	■□□□□ 0.96
PPA1-206	ENST00000625364	MARCH10	Q8NA82	808 aa	Predicted RBP	21.01	■□□□□ 0.95
PPA1-206	ENST00000625364	SENP3-EIF4A1	A0A087X0R7	540 aa		21	■□□□□ 0.95
PPA1-206	ENST00000625364	NLRP6	P59044	892 aa		21	■□□□□ 0.95
PPA1-206	ENST00000625364	CDCA7	Q9BWT1	371 aa	Predicted RBP	21	■□□□□ 0.95
PPA1-206	ENST00000625364	FHDC1	Q9C0D6	1143 aa	Predicted RBP	21	■□□□□ 0.95
PPA1-206	ENST00000625364	USP6	P35125	1406 aa		21	■□□□□ 0.95
PPA1-206	ENST00000625364	WDR17	Q8IZU2	1322 aa		21	■□□□□ 0.95
PPA1-206	ENST00000625364	TXNRD1	Q16881	649 aa		20.99	■□□□□ 0.95
PPA1-206	ENST00000625364	SYT17	Q9BSW7	474 aa		20.99	■□□□□ 0.95
PPA1-206	ENST00000625364	SLC15A2	Q16348	729 aa		20.98	■□□□□ 0.95
PPA1-206	ENST00000625364	CABP2	Q9NPB3	220 aa		20.98	■□□□□ 0.95
PPA1-206	ENST00000625364	PIK3C2A	O00443	1686 aa		20.98	■□□□□ 0.95
PPA1-206	ENST00000625364	CPSF1	Q10570	1443 aa	Known RBP	20.97	■□□□□ 0.95
PPA1-206	ENST00000625364	MTFR1L	Q9H019	292 aa		20.97	■□□□□ 0.95
PPA1-206	ENST00000625364	QRICH2	Q9H0J4	1663 aa		20.96	■□□□□ 0.95
PPA1-206	ENST00000625364	RGPD5	Q99666	1765 aa		20.96	■□□□□ 0.95
PPA1-206	ENST00000625364	AXIN2	Q9Y2T1	843 aa		20.95	■□□□□ 0.94
PPA1-206	ENST00000625364	CENPJ	Q9HC77	1338 aa	Predicted RBP	20.95	■□□□□ 0.94
PPA1-206	ENST00000625364	C1QTNF8	P60827	252 aa		20.94	■□□□□ 0.94
PPA1-206	ENST00000625364	CSB-PGBD3	P0DP91	1061 aa		20.93	■□□□□ 0.94
PPA1-206	ENST00000625364	NBPF1	Q3BBV0	1214 aa		20.93	■□□□□ 0.94
PPA1-206	ENST00000625364	SGIP1	Q9BQI5	828 aa		20.93	■□□□□ 0.94
PPA1-206	ENST00000625364	CABP1	Q9NZU7	370 aa		20.93	■□□□□ 0.94
PPA1-206	ENST00000625364	CARD10	Q9BWT7	1032 aa		20.92	■□□□□ 0.94
PPA1-206	ENST00000625364	GOLGB1	Q14789	3259 aa	Known RBP	20.92	■□□□□ 0.94
PPA1-206	ENST00000625364	NHS	Q6T4R5	1651 aa		20.92	■□□□□ 0.94
PPA1-206	ENST00000625364	EXOC5	O00471	708 aa		20.91	■□□□□ 0.94
PPA1-206	ENST00000625364	TNS2	Q63HR2	1409 aa		20.91	■□□□□ 0.94
PPA1-206	ENST00000625364	ARHGEF25	Q86VW2	580 aa		20.9	■□□□□ 0.94
PPA1-206	ENST00000625364	ARX	Q96QS3	562 aa		20.9	■□□□□ 0.94
PPA1-206	ENST00000625364	PAPPA	Q13219	1627 aa		20.89	■□□□□ 0.94
PPA1-206	ENST00000625364	TRPM1	Q7Z4N2	1603 aa		20.89	■□□□□ 0.94
PPA1-206	ENST00000625364	MAP3K5	Q99683	1374 aa		20.89	■□□□□ 0.93
PPA1-206	ENST00000625364	CEP350	Q5VT06	3117 aa		20.89	■□□□□ 0.93
PPA1-206	ENST00000625364	CCDC7	Q96M83	1385 aa		20.88	■□□□□ 0.93
PPA1-206	ENST00000625364	KCNH5	Q8NCM2	988 aa		20.88	■□□□□ 0.93
PPA1-206	ENST00000625364	KAT6B	Q8WYB5	2073 aa		20.88	■□□□□ 0.93
PPA1-206	ENST00000625364	SOX12	O15370	315 aa		20.87	■□□□□ 0.93
PPA1-206	ENST00000625364	ABCC6	O95255	1503 aa		20.86	■□□□□ 0.93
PPA1-206	ENST00000625364	NFAT5	O94916	1531 aa		20.85	■□□□□ 0.93
PPA1-206	ENST00000625364	BTAF1	O14981	1849 aa		20.85	■□□□□ 0.93
PPA1-206	ENST00000625364	TTC21B	Q7Z4L5	1316 aa		20.84	■□□□□ 0.93
PPA1-206	ENST00000625364	ACSBG1	Q96GR2	724 aa		20.84	■□□□□ 0.93
PPA1-206	ENST00000625364	GPR162	Q16538	588 aa		20.83	■□□□□ 0.93
PPA1-206	ENST00000625364	GIGYF1	O75420	1035 aa	Predicted RBP	20.82	■□□□□ 0.92
PPA1-206	ENST00000625364	EVC2	Q86UK5	1308 aa		20.81	■□□□□ 0.92
PPA1-206	ENST00000625364	ZNF827	Q17R98	1081 aa		20.81	■□□□□ 0.92
PPA1-206	ENST00000625364	TTC21A	Q8NDW8	1320 aa		20.8	■□□□□ 0.92
PPA1-206	ENST00000625364	ZNF692	Q9BU19	519 aa	Predicted RBP	20.8	■□□□□ 0.92
PPA1-206	ENST00000625364	IFFO2	Q5TF58	517 aa		20.79	■□□□□ 0.92
PPA1-206	ENST00000625364	KLHL34	Q8N239	644 aa		20.79	■□□□□ 0.92
PPA1-206	ENST00000625364	QSER1	Q2KHR3	1735 aa		20.78	■□□□□ 0.92
PPA1-206	ENST00000625364	POLD1	P28340	1107 aa		20.76	■□□□□ 0.91
PPA1-206	ENST00000625364	PELP1	Q8IZL8	1130 aa	Known RBP	20.76	■□□□□ 0.91
PPA1-206	ENST00000625364	NLRP2	Q9NX02	1062 aa		20.76	■□□□□ 0.91
PPA1-206	ENST00000625364	ERBB3	P21860	1342 aa		20.76	■□□□□ 0.91
PPA1-206	ENST00000625364	COL24A1	Q17RW2	1714 aa		20.75	■□□□□ 0.91
PPA1-206	ENST00000625364	IL2RB	P14784	551 aa		20.75	■□□□□ 0.91
PPA1-206	ENST00000625364	LRRC4B	Q9NT99	713 aa		20.75	■□□□□ 0.91
PPA1-206	ENST00000625364	SHANK3	Q9BYB0	1731 aa		20.75	■□□□□ 0.91
PPA1-206	ENST00000625364	LTN1	O94822	1766 aa		20.74	■□□□□ 0.91
PPA1-206	ENST00000625364	MON2	Q7Z3U7	1717 aa		20.74	■□□□□ 0.91
PPA1-206	ENST00000625364	SLC16A10	Q8TF71	515 aa		20.74	■□□□□ 0.91
PPA1-206	ENST00000625364	TUBGCP6	Q96RT7	1819 aa		20.74	■□□□□ 0.91
PPA1-206	ENST00000625364	KTN1	Q86UP2	1357 aa	Known RBP	20.73	■□□□□ 0.91
PPA1-206	ENST00000625364	AKT1S1	Q96B36	256 aa		20.73	■□□□□ 0.91
PPA1-206	ENST00000625364	USP54	Q70EL1	1684 aa		20.72	■□□□□ 0.91
PPA1-206	ENST00000625364	SLC27A3	Q5K4L6	730 aa		20.7	■□□□□ 0.9
PPA1-206	ENST00000625364	PNPLA7	Q6ZV29	1317 aa		20.7	■□□□□ 0.9
PPA1-206	ENST00000625364	NLGN2	Q8NFZ4	835 aa		20.69	■□□□□ 0.9
PPA1-206	ENST00000625364	USP31	Q70CQ4	1352 aa		20.69	■□□□□ 0.9
PPA1-206	ENST00000625364	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	20.68	■□□□□ 0.9
PPA1-206	ENST00000625364	ANKRD24	Q8TF21	1146 aa		20.68	■□□□□ 0.9
PPA1-206	ENST00000625364	TFCP2L1	Q9NZI6	479 aa		20.67	■□□□□ 0.9
PPA1-206	ENST00000625364	NME9	Q86XW9	330 aa		20.65	■□□□□ 0.9
PPA1-206	ENST00000625364	ROCK2	O75116	1388 aa	Known RBP	20.64	■□□□□ 0.89
PPA1-206	ENST00000625364	GRIN3B	O60391	1043 aa		20.64	■□□□□ 0.89
PPA1-206	ENST00000625364	LY75	O60449	1722 aa		20.64	■□□□□ 0.89
PPA1-206	ENST00000625364	DOT1L	Q8TEK3	1739 aa		20.64	■□□□□ 0.89
PPA1-206	ENST00000625364	YBX3	P16989	372 aa	Known RBP eCLIP	20.63	■□□□□ 0.89	8e-11	■□□□□ 9.1
PPA1-206	ENST00000625364	DDX54	Q8TDD1	881 aa	Known RBP	20.63	■□□□□ 0.89
PPA1-206	ENST00000625364	FAM208A	Q9UK61	1670 aa	Known RBP	20.63	■□□□□ 0.89
PPA1-206	ENST00000625364	KCNQ4	P56696	695 aa		20.62	■□□□□ 0.89
PPA1-206	ENST00000625364	L3MBTL2	Q969R5	705 aa		20.62	■□□□□ 0.89
PPA1-206	ENST00000625364	SYTL4	Q96C24	671 aa	Predicted RBP	20.62	■□□□□ 0.89
PPA1-206	ENST00000625364	SBNO2	Q9Y2G9	1366 aa		20.61	■□□□□ 0.89
PPA1-206	ENST00000625364	ATP10D	Q9P241	1426 aa		20.61	■□□□□ 0.89
PPA1-206	ENST00000625364	ANKRD36B	Q8N2N9	1353 aa		20.6	■□□□□ 0.89
PPA1-206	ENST00000625364	CD163L1	Q9NR16	1453 aa		20.6	■□□□□ 0.89
PPA1-206	ENST00000625364	PRIM1	P49642	420 aa	Known RBP	20.58	■□□□□ 0.89
PPA1-206	ENST00000625364	NSD2	O96028	1365 aa		20.58	■□□□□ 0.88

Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms