RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 RBM6P78332 1123 aaKnown RBP18.47■□□□□ 0.55
MECP2-213ENST00000622433 MAP3K19Q56UN5 1328 aa18.47■□□□□ 0.55
MECP2-213ENST00000622433 KIF24Q5T7B8 1368 aa18.46■□□□□ 0.55
MECP2-213ENST00000622433 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.54
MECP2-213ENST00000622433 RXRBP28702 533 aa18.45■□□□□ 0.54
MECP2-213ENST00000622433 AXIN2Q9Y2T1 843 aa18.45■□□□□ 0.54
MECP2-213ENST00000622433 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
MECP2-213ENST00000622433 GLI3P10071 1580 aa18.44■□□□□ 0.54
MECP2-213ENST00000622433 IP6K1Q92551 441 aa18.44■□□□□ 0.54
MECP2-213ENST00000622433 GJD4Q96KN9 370 aaPredicted RBP18.44■□□□□ 0.54
MECP2-213ENST00000622433 FBLN1P23142 703 aa18.43■□□□□ 0.54
MECP2-213ENST00000622433 EVA1CP58658 441 aa18.43■□□□□ 0.54
MECP2-213ENST00000622433 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
MECP2-213ENST00000622433 MORC1Q86VD1 984 aa18.43■□□□□ 0.54
MECP2-213ENST00000622433 SPATA31A5Q5VU36 1347 aa18.43■□□□□ 0.54
MECP2-213ENST00000622433 SPATA31A7Q8IWB4 1347 aa18.43■□□□□ 0.54
MECP2-213ENST00000622433 AMPHP49418 695 aa18.42■□□□□ 0.54
MECP2-213ENST00000622433 STRN4Q9NRL3 753 aa18.42■□□□□ 0.54
MECP2-213ENST00000622433 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
MECP2-213ENST00000622433 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
MECP2-213ENST00000622433 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
MECP2-213ENST00000622433 HOXC9P31274 260 aa18.41■□□□□ 0.54
MECP2-213ENST00000622433 LARP1Q6PKG0 1096 aaKnown RBP18.41■□□□□ 0.54
MECP2-213ENST00000622433 ERBB3P21860 1342 aa18.41■□□□□ 0.54
MECP2-213ENST00000622433 FLT4P35916 1363 aa18.41■□□□□ 0.54
MECP2-213ENST00000622433 CRB1P82279 1406 aa18.4■□□□□ 0.54
MECP2-213ENST00000622433 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
MECP2-213ENST00000622433 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
MECP2-213ENST00000622433 CCDC9Q9Y3X0 531 aaKnown RBP18.4■□□□□ 0.54
MECP2-213ENST00000622433 SPATA31A1Q5TZJ5 1347 aa18.4■□□□□ 0.54
MECP2-213ENST00000622433 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
MECP2-213ENST00000622433 POLKQ9UBT6 870 aa18.39■□□□□ 0.53
MECP2-213ENST00000622433 EMILIN1Q9Y6C2 1016 aa18.39■□□□□ 0.53
MECP2-213ENST00000622433 INSRP06213 1382 aa18.39■□□□□ 0.53
MECP2-213ENST00000622433 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
MECP2-213ENST00000622433 ILDR2Q71H61 639 aa18.38■□□□□ 0.53
MECP2-213ENST00000622433 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
MECP2-213ENST00000622433 RGS12O14924 1447 aa18.38■□□□□ 0.53
MECP2-213ENST00000622433 FAM208AQ9UK61 1670 aaKnown RBP18.38■□□□□ 0.53
MECP2-213ENST00000622433 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
MECP2-213ENST00000622433 ONECUT3O60422 494 aaPredicted RBP18.37■□□□□ 0.53
MECP2-213ENST00000622433 TNNT2P45379 298 aaPredicted RBP18.37■□□□□ 0.53
MECP2-213ENST00000622433 THRAP3Q9Y2W1 955 aaKnown RBP18.37■□□□□ 0.53
MECP2-213ENST00000622433 CSB-PGBD3P0DP91 1061 aa18.36■□□□□ 0.53
MECP2-213ENST00000622433 TOM1L2Q6ZVM7 507 aa18.36■□□□□ 0.53
MECP2-213ENST00000622433 CARD10Q9BWT7 1032 aa18.36■□□□□ 0.53
MECP2-213ENST00000622433 BARGINQ6ZT62 677 aa18.35■□□□□ 0.53
MECP2-213ENST00000622433 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
MECP2-213ENST00000622433 THSD7AQ9UPZ6 1657 aa18.34■□□□□ 0.53
MECP2-213ENST00000622433 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
MECP2-213ENST00000622433 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
MECP2-213ENST00000622433 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
MECP2-213ENST00000622433 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
MECP2-213ENST00000622433 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
MECP2-213ENST00000622433 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
MECP2-213ENST00000622433 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
MECP2-213ENST00000622433 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
MECP2-213ENST00000622433 WNK3Q9BYP7 1800 aa18.3■□□□□ 0.52
MECP2-213ENST00000622433 DISP2A7MBM2 1401 aa18.3■□□□□ 0.52
MECP2-213ENST00000622433 CDCA7Q9BWT1 371 aaPredicted RBP18.29■□□□□ 0.52
MECP2-213ENST00000622433 MTHFSP49914 203 aa18.28■□□□□ 0.52
MECP2-213ENST00000622433 CNGB1Q14028 1251 aaPredicted RBP18.28■□□□□ 0.52
MECP2-213ENST00000622433 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
MECP2-213ENST00000622433 NCAPD2Q15021 1401 aa18.27■□□□□ 0.52
MECP2-213ENST00000622433 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.52
MECP2-213ENST00000622433 NBPF6Q5VWK0 638 aa18.26■□□□□ 0.51
MECP2-213ENST00000622433 NBPF4Q96M43 638 aa18.26■□□□□ 0.51
MECP2-213ENST00000622433 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
MECP2-213ENST00000622433 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
MECP2-213ENST00000622433 A0A0G2JS52 829 aa18.25■□□□□ 0.51
MECP2-213ENST00000622433 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
MECP2-213ENST00000622433 MYT1Q01538 1121 aa18.25■□□□□ 0.51
MECP2-213ENST00000622433 RALBP1Q15311 655 aa18.25■□□□□ 0.51
MECP2-213ENST00000622433 LRRC37A3O60309 1634 aa18.24■□□□□ 0.51
MECP2-213ENST00000622433 COL3A1P02461 1466 aaPredicted RBP18.24■□□□□ 0.51
MECP2-213ENST00000622433 IL2RBP14784 551 aa18.23■□□□□ 0.51
MECP2-213ENST00000622433 KRT27Q7Z3Y8 459 aa18.23■□□□□ 0.51
MECP2-213ENST00000622433 IL13P35225 146 aa18.22■□□□□ 0.51
MECP2-213ENST00000622433 EYA1Q99502 592 aa18.22■□□□□ 0.51
MECP2-213ENST00000622433 TNS2Q63HR2 1409 aa18.22■□□□□ 0.51
MECP2-213ENST00000622433 IGSF1Q8N6C5 1336 aa18.22■□□□□ 0.51
MECP2-213ENST00000622433 DDB1Q16531 1140 aa18.21■□□□□ 0.51
MECP2-213ENST00000622433 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
MECP2-213ENST00000622433 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
MECP2-213ENST00000622433 MEGF6O75095 1541 aa18.2■□□□□ 0.5
MECP2-213ENST00000622433 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
MECP2-213ENST00000622433 CFAP53Q96M91 514 aa18.2■□□□□ 0.5
MECP2-213ENST00000622433 OVOS2A0A0G2JMS6 1433 aa18.2■□□□□ 0.5
MECP2-213ENST00000622433 DIAPH1O60610 1272 aaKnown RBP18.19■□□□□ 0.5
MECP2-213ENST00000622433 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
MECP2-213ENST00000622433 EXOC5O00471 708 aa18.18■□□□□ 0.5
MECP2-213ENST00000622433 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
MECP2-213ENST00000622433 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
MECP2-213ENST00000622433 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
MECP2-213ENST00000622433 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
MECP2-213ENST00000622433 KDRP35968 1356 aa18.17■□□□□ 0.5
MECP2-213ENST00000622433 SOCS7O14512 581 aa18.16■□□□□ 0.5
MECP2-213ENST00000622433 BCL9O00512 1426 aa18.15■□□□□ 0.5
MECP2-213ENST00000622433 MARCH10Q8NA82 808 aaPredicted RBP18.14■□□□□ 0.49
MECP2-213ENST00000622433 ZCRB1Q8TBF4 217 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms