RNA–Protein interactions for RNA: ENST00000622082.4

NUCB2-220, Transcript of nucleobindin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NUCB2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-220ENST00000622082 CCDC9Q9Y3X0 531 aaKnown RBP11.6□□□□□ -0.55
NUCB2-220ENST00000622082 ATP5J2-PTCD1G3V325 749 aa11.59□□□□□ -0.55
NUCB2-220ENST00000622082 EML3Q32P44 896 aa11.59□□□□□ -0.55
NUCB2-220ENST00000622082 ERFEQ4G0M1 354 aa11.59□□□□□ -0.55
NUCB2-220ENST00000622082 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
NUCB2-220ENST00000622082 CARNS1A5YM72 827 aa11.58□□□□□ -0.56
NUCB2-220ENST00000622082 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
NUCB2-220ENST00000622082 KCNA1Q09470 495 aa11.58□□□□□ -0.56
NUCB2-220ENST00000622082 RNF20Q5VTR2 975 aa11.58□□□□□ -0.56
NUCB2-220ENST00000622082 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
NUCB2-220ENST00000622082 TMEM88BA6NKF7 163 aa11.57□□□□□ -0.56
NUCB2-220ENST00000622082 RASA1P20936 1047 aa11.57□□□□□ -0.56
NUCB2-220ENST00000622082 GGCXP38435 758 aa11.57□□□□□ -0.56
NUCB2-220ENST00000622082 NOVA2Q9UNW9 492 aaKnown RBP11.57□□□□□ -0.56
NUCB2-220ENST00000622082 PPEF1O14829 653 aaPredicted RBP11.56□□□□□ -0.56
NUCB2-220ENST00000622082 GIGYF1O75420 1035 aaPredicted RBP11.56□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L15C9J2P7 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L10C9JJH3 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L13C9JLJ4 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L12C9JPN9 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L11C9JVI0 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L21D6R901 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L18D6R9N7 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L22D6RA61 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L17D6RBQ6 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
NUCB2-220ENST00000622082 SH3BP2P78314 561 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 C4orf48Q5BLP8 95 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 TRAF7Q6Q0C0 670 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 CDV3Q9UKY7 258 aaKnown RBP11.55□□□□□ -0.56
NUCB2-220ENST00000622082 DOLKQ9UPQ8 538 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
NUCB2-220ENST00000622082 NBPF20Q3BBV1 942 aa11.54□□□□□ -0.56
NUCB2-220ENST00000622082 TSGA10IPQ3SY00 556 aa11.54□□□□□ -0.56
NUCB2-220ENST00000622082 GZF1Q9H116 711 aaPredicted RBP11.54□□□□□ -0.56
NUCB2-220ENST00000622082 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
NUCB2-220ENST00000622082 CRTC2Q53ET0 693 aaPredicted RBP11.54□□□□□ -0.56
NUCB2-220ENST00000622082 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
NUCB2-220ENST00000622082 B4GALNT3Q6L9W6 998 aa11.54□□□□□ -0.56
NUCB2-220ENST00000622082 C1QTNF2Q9BXJ5 285 aa11.54□□□□□ -0.56
NUCB2-220ENST00000622082 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
NUCB2-220ENST00000622082 ATP1A2P50993 1020 aa11.53□□□□□ -0.56
NUCB2-220ENST00000622082 PTK7Q13308 1070 aa11.53□□□□□ -0.56
NUCB2-220ENST00000622082 CCDC125Q86Z20 511 aa11.53□□□□□ -0.56
NUCB2-220ENST00000622082 ANKLE1Q8NAG6 615 aa11.53□□□□□ -0.56
NUCB2-220ENST00000622082 FAM200AQ8TCP9 573 aa11.53□□□□□ -0.56
NUCB2-220ENST00000622082 RNF166Q96A37 237 aaPredicted RBP11.53□□□□□ -0.56
NUCB2-220ENST00000622082 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
NUCB2-220ENST00000622082 CDCA7Q9BWT1 371 aaPredicted RBP11.53□□□□□ -0.56
NUCB2-220ENST00000622082 OXLD1Q5BKU9 147 aa11.52□□□□□ -0.57
NUCB2-220ENST00000622082 TRMT44Q8IYL2 757 aaKnown RBP11.52□□□□□ -0.57
NUCB2-220ENST00000622082 OGFOD1Q8N543 542 aa11.52□□□□□ -0.57
NUCB2-220ENST00000622082 STK32AQ8WU08 396 aa11.52□□□□□ -0.57
NUCB2-220ENST00000622082 TRIM32Q13049 653 aa11.51□□□□□ -0.57
NUCB2-220ENST00000622082 SEPT12Q8IYM1 358 aa11.51□□□□□ -0.57
NUCB2-220ENST00000622082 SIRT1Q96EB6 747 aa11.51□□□□□ -0.57
NUCB2-220ENST00000622082 ANKMY2Q8IV38 441 aa11.5□□□□□ -0.57
NUCB2-220ENST00000622082 DNAAF2Q9NVR5 837 aaKnown RBP11.5□□□□□ -0.57
NUCB2-220ENST00000622082 ESPNB1AK53 854 aa11.49□□□□□ -0.57
NUCB2-220ENST00000622082 VARSP26640 1264 aaKnown RBP11.49□□□□□ -0.57
NUCB2-220ENST00000622082 WNT7BP56706 349 aa11.49□□□□□ -0.57
NUCB2-220ENST00000622082 TMCO4Q5TGY1 634 aa11.49□□□□□ -0.57
NUCB2-220ENST00000622082 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
NUCB2-220ENST00000622082 USP4Q13107 963 aa11.48□□□□□ -0.57
NUCB2-220ENST00000622082 LARGE2Q8N3Y3 721 aa11.48□□□□□ -0.57
NUCB2-220ENST00000622082 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.48□□□□□ -0.57
NUCB2-220ENST00000622082 PCDHB11Q9Y5F2 797 aa11.48□□□□□ -0.57
NUCB2-220ENST00000622082 DPYDQ12882 1025 aa11.47□□□□□ -0.57
NUCB2-220ENST00000622082 RBM19Q9Y4C8 960 aaKnown RBP11.47□□□□□ -0.57
NUCB2-220ENST00000622082 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
NUCB2-220ENST00000622082 RPIAP49247 311 aa11.46□□□□□ -0.57
NUCB2-220ENST00000622082 CLDN10P78369 228 aa11.46□□□□□ -0.57
NUCB2-220ENST00000622082 PLA2G2CQ5R387 149 aa11.46□□□□□ -0.57
NUCB2-220ENST00000622082 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.57
NUCB2-220ENST00000622082 ZNF594Q96JF6 807 aaPredicted RBP11.46□□□□□ -0.57
NUCB2-220ENST00000622082 KCTD15Q96SI1 283 aaPredicted RBP11.46□□□□□ -0.57
NUCB2-220ENST00000622082 GTF2IP78347 998 aa11.45□□□□□ -0.58
NUCB2-220ENST00000622082 SKOR1P84550 965 aa11.44□□□□□ -0.58
NUCB2-220ENST00000622082 VASH1Q7L8A9 365 aaPredicted RBP11.44□□□□□ -0.58
NUCB2-220ENST00000622082 MAP4K5Q9Y4K4 846 aa11.44□□□□□ -0.58
NUCB2-220ENST00000622082 IVNS1ABPQ9Y6Y0 642 aa11.44□□□□□ -0.58
NUCB2-220ENST00000622082 ZBTB7BO15156 539 aaPredicted RBP11.43□□□□□ -0.58
NUCB2-220ENST00000622082 RAB15P59190 212 aa11.43□□□□□ -0.58
NUCB2-220ENST00000622082 SPNS2Q8IVW8 549 aa11.43□□□□□ -0.58
NUCB2-220ENST00000622082 PSME1Q06323 249 aa11.42□□□□□ -0.58
NUCB2-220ENST00000622082 SWI5Q1ZZU3 235 aa11.42□□□□□ -0.58
NUCB2-220ENST00000622082 CCDC102BQ68D86 513 aa11.42□□□□□ -0.58
NUCB2-220ENST00000622082 SIX5Q8N196 739 aa11.42□□□□□ -0.58
NUCB2-220ENST00000622082 EHBP1Q8NDI1 1231 aa11.42□□□□□ -0.58
NUCB2-220ENST00000622082 CLP1Q92989 425 aaKnown RBP11.42□□□□□ -0.58
NUCB2-220ENST00000622082 MYCP01106 439 aaPredicted RBP11.41□□□□□ -0.58
NUCB2-220ENST00000622082 FAM69CQ0P6D2 419 aa11.41□□□□□ -0.58
NUCB2-220ENST00000622082 TRIM52Q96A61 297 aa11.41□□□□□ -0.58
NUCB2-220ENST00000622082 SSFA2P28290 1259 aa11.41□□□□□ -0.58
NUCB2-220ENST00000622082 SEC13P55735 322 aa11.41□□□□□ -0.58
NUCB2-220ENST00000622082 ESF1Q9H501 851 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms