RNA–Protein interactions for RNA: ENST00000621757.1

COL8A1-208, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-208ENST00000621757 SPATA31A1Q5TZJ5 1347 aa16.68■□□□□ 0.26
COL8A1-208ENST00000621757 EVA1CP58658 441 aa16.67■□□□□ 0.26
COL8A1-208ENST00000621757 LARP1Q6PKG0 1096 aaKnown RBP16.67■□□□□ 0.26
COL8A1-208ENST00000621757 COG3Q96JB2 828 aa16.67■□□□□ 0.26
COL8A1-208ENST00000621757 KIF7Q2M1P5 1343 aa16.67■□□□□ 0.26
COL8A1-208ENST00000621757 FYB1O15117 783 aa16.66■□□□□ 0.26
COL8A1-208ENST00000621757 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
COL8A1-208ENST00000621757 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
COL8A1-208ENST00000621757 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
COL8A1-208ENST00000621757 AXIN2Q9Y2T1 843 aa16.66■□□□□ 0.26
COL8A1-208ENST00000621757 CRB1P82279 1406 aa16.65■□□□□ 0.26
COL8A1-208ENST00000621757 WNK3Q9BYP7 1800 aa16.65■□□□□ 0.26
COL8A1-208ENST00000621757 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
COL8A1-208ENST00000621757 A0A0G2JS52 829 aa16.64■□□□□ 0.25
COL8A1-208ENST00000621757 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
COL8A1-208ENST00000621757 MYT1Q01538 1121 aa16.64■□□□□ 0.25
COL8A1-208ENST00000621757 USP35Q9P2H5 1018 aa16.64■□□□□ 0.25
COL8A1-208ENST00000621757 EP400Q96L91 3159 aa16.62■□□□□ 0.25
COL8A1-208ENST00000621757 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
COL8A1-208ENST00000621757 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
COL8A1-208ENST00000621757 WDR17Q8IZU2 1322 aa16.62■□□□□ 0.25
COL8A1-208ENST00000621757 PANK3Q9H999 370 aa16.61■□□□□ 0.25
COL8A1-208ENST00000621757 PARP4Q9UKK3 1724 aaKnown RBP16.61■□□□□ 0.25
COL8A1-208ENST00000621757 BLMP54132 1417 aaPredicted RBP16.61■□□□□ 0.25
COL8A1-208ENST00000621757 PEAK1Q9H792 1746 aa16.6■□□□□ 0.25
COL8A1-208ENST00000621757 FBLN1P23142 703 aa16.6■□□□□ 0.25
COL8A1-208ENST00000621757 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
COL8A1-208ENST00000621757 TCP11L2Q8N4U5 519 aa16.6■□□□□ 0.25
COL8A1-208ENST00000621757 ERBB3P21860 1342 aa16.6■□□□□ 0.25
COL8A1-208ENST00000621757 MAP3K19Q56UN5 1328 aa16.6■□□□□ 0.25
COL8A1-208ENST00000621757 CCDC7Q96M83 1385 aa16.6■□□□□ 0.25
COL8A1-208ENST00000621757 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
COL8A1-208ENST00000621757 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
COL8A1-208ENST00000621757 CSB-PGBD3P0DP91 1061 aa16.59■□□□□ 0.25
COL8A1-208ENST00000621757 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
COL8A1-208ENST00000621757 CCDC125Q86Z20 511 aa16.59■□□□□ 0.25
COL8A1-208ENST00000621757 RTL1A6NKG5 1358 aa16.59■□□□□ 0.25
COL8A1-208ENST00000621757 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
COL8A1-208ENST00000621757 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
COL8A1-208ENST00000621757 THRAP3Q9Y2W1 955 aaKnown RBP16.58■□□□□ 0.24
COL8A1-208ENST00000621757 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
COL8A1-208ENST00000621757 HOXC9P31274 260 aa16.56■□□□□ 0.24
COL8A1-208ENST00000621757 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
COL8A1-208ENST00000621757 IP6K1Q92551 441 aa16.56■□□□□ 0.24
COL8A1-208ENST00000621757 NSD2O96028 1365 aa16.55■□□□□ 0.24
COL8A1-208ENST00000621757 AMPHP49418 695 aa16.55■□□□□ 0.24
COL8A1-208ENST00000621757 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
COL8A1-208ENST00000621757 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
COL8A1-208ENST00000621757 DEFB132Q7Z7B7 95 aa16.54■□□□□ 0.24
COL8A1-208ENST00000621757 RGPD2P0DJD1 1756 aa16.54■□□□□ 0.24
COL8A1-208ENST00000621757 FLT4P35916 1363 aa16.53■□□□□ 0.24
COL8A1-208ENST00000621757 LTV1Q96GA3 475 aaPredicted RBP16.53■□□□□ 0.24
COL8A1-208ENST00000621757 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
COL8A1-208ENST00000621757 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
COL8A1-208ENST00000621757 KIF24Q5T7B8 1368 aa16.52■□□□□ 0.24
COL8A1-208ENST00000621757 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
COL8A1-208ENST00000621757 KNSTRNQ9Y448 316 aa16.52■□□□□ 0.24
COL8A1-208ENST00000621757 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
COL8A1-208ENST00000621757 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
COL8A1-208ENST00000621757 RGPD1P0DJD0 1748 aa16.5■□□□□ 0.23
COL8A1-208ENST00000621757 TNNT2P45379 298 aaPredicted RBP16.5■□□□□ 0.23
COL8A1-208ENST00000621757 TNS1Q9HBL0 1735 aaKnown RBP16.5■□□□□ 0.23
COL8A1-208ENST00000621757 INSRP06213 1382 aa16.5■□□□□ 0.23
COL8A1-208ENST00000621757 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
COL8A1-208ENST00000621757 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
COL8A1-208ENST00000621757 TNS2Q63HR2 1409 aa16.49■□□□□ 0.23
COL8A1-208ENST00000621757 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
COL8A1-208ENST00000621757 HSP90AB2PQ58FF8 381 aa16.48■□□□□ 0.23
COL8A1-208ENST00000621757 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
COL8A1-208ENST00000621757 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
COL8A1-208ENST00000621757 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
COL8A1-208ENST00000621757 DDB1Q16531 1140 aa16.47■□□□□ 0.23
COL8A1-208ENST00000621757 OVOS2A0A0G2JMS6 1433 aa16.46■□□□□ 0.23
COL8A1-208ENST00000621757 MORC1Q86VD1 984 aa16.46■□□□□ 0.23
COL8A1-208ENST00000621757 POLKQ9UBT6 870 aa16.46■□□□□ 0.23
COL8A1-208ENST00000621757 IL2RBP14784 551 aa16.45■□□□□ 0.22
COL8A1-208ENST00000621757 MEGF6O75095 1541 aa16.45■□□□□ 0.22
COL8A1-208ENST00000621757 FAM196AQ6ZSG2 479 aa16.44■□□□□ 0.22
COL8A1-208ENST00000621757 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
COL8A1-208ENST00000621757 SBF2Q86WG5 1849 aa16.43■□□□□ 0.22
COL8A1-208ENST00000621757 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
COL8A1-208ENST00000621757 NBPF6Q5VWK0 638 aa16.43■□□□□ 0.22
COL8A1-208ENST00000621757 USHBP1Q8N6Y0 703 aa16.43■□□□□ 0.22
COL8A1-208ENST00000621757 NBPF4Q96M43 638 aa16.43■□□□□ 0.22
COL8A1-208ENST00000621757 NPC1L1Q9UHC9 1359 aa16.42■□□□□ 0.22
COL8A1-208ENST00000621757 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
COL8A1-208ENST00000621757 EXOC5O00471 708 aa16.41■□□□□ 0.22
COL8A1-208ENST00000621757 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
COL8A1-208ENST00000621757 NCAPD2Q15021 1401 aa16.41■□□□□ 0.22
COL8A1-208ENST00000621757 BCL9O00512 1426 aa16.4■□□□□ 0.22
COL8A1-208ENST00000621757 TRIM37O94972 964 aa16.4■□□□□ 0.22
COL8A1-208ENST00000621757 PSDA5PKW4 1024 aaPredicted RBP16.39■□□□□ 0.21
COL8A1-208ENST00000621757 BAG6P46379 1132 aa16.39■□□□□ 0.21
COL8A1-208ENST00000621757 CNGB1Q14028 1251 aaPredicted RBP16.39■□□□□ 0.21
COL8A1-208ENST00000621757 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
COL8A1-208ENST00000621757 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
COL8A1-208ENST00000621757 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
COL8A1-208ENST00000621757 EN1Q05925 392 aaPredicted RBP16.36■□□□□ 0.21
COL8A1-208ENST00000621757 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
COL8A1-208ENST00000621757 EYA1Q99502 592 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms