RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 NME9Q86XW9 330 aa27.64■■■□□ 2.02
PTBP1-219ENST00000621737 TMF1P82094 1093 aa27.63■■■□□ 2.01
PTBP1-219ENST00000621737 RGPD1P0DJD0 1748 aa27.63■■■□□ 2.01
PTBP1-219ENST00000621737 PARP4Q9UKK3 1724 aaKnown RBP27.62■■■□□ 2.01
PTBP1-219ENST00000621737 ZRANB1Q9UGI0 708 aa27.62■■■□□ 2.01
PTBP1-219ENST00000621737 AXIN2Q9Y2T1 843 aa27.61■■■□□ 2.01
PTBP1-219ENST00000621737 RGPD5Q99666 1765 aa27.6■■■□□ 2.01
PTBP1-219ENST00000621737 OVOS2A0A0J9YW53 1432 aa27.6■■■□□ 2.01
PTBP1-219ENST00000621737 OVOS2Q6IE36 1432 aa27.6■■■□□ 2.01
PTBP1-219ENST00000621737 CCER1Q8TC90 406 aaPredicted RBP27.6■■■□□ 2.01
PTBP1-219ENST00000621737 WDR17Q8IZU2 1322 aa27.6■■■□□ 2.01
PTBP1-219ENST00000621737 FAM182BQ5T319 152 aa27.59■■■□□ 2.01
PTBP1-219ENST00000621737 ANKRD36BQ8N2N9 1353 aa27.59■■■□□ 2.01
PTBP1-219ENST00000621737 DEFB132Q7Z7B7 95 aa27.58■■■□□ 2.01
PTBP1-219ENST00000621737 LTN1O94822 1766 aa27.58■■■□□ 2
PTBP1-219ENST00000621737 WNK3Q9BYP7 1800 aa27.57■■■□□ 2
PTBP1-219ENST00000621737 TNS1Q9HBL0 1735 aaKnown RBP27.57■■■□□ 2
PTBP1-219ENST00000621737 CDCA8Q53HL2 280 aa27.56■■■□□ 2
PTBP1-219ENST00000621737 TOM1L2Q6ZVM7 507 aa27.56■■■□□ 2
PTBP1-219ENST00000621737 PDE3BQ13370 1112 aa27.55■■■□□ 2
PTBP1-219ENST00000621737 LRRC37A3O60309 1634 aa27.55■■■□□ 2
PTBP1-219ENST00000621737 FAM196AQ6ZSG2 479 aa27.54■■■□□ 2
PTBP1-219ENST00000621737 BAG6P46379 1132 aa27.53■■■□□ 2
PTBP1-219ENST00000621737 DISP2A7MBM2 1401 aa27.51■■□□□ 1.99
PTBP1-219ENST00000621737 CSB-PGBD3P0DP91 1061 aa27.51■■□□□ 1.99
PTBP1-219ENST00000621737 MYOM1P52179 1685 aa27.51■■□□□ 1.99
PTBP1-219ENST00000621737 CARD10Q9BWT7 1032 aa27.5■■□□□ 1.99
PTBP1-219ENST00000621737 ERBB3P21860 1342 aa27.47■■□□□ 1.99
PTBP1-219ENST00000621737 COG3Q96JB2 828 aa27.47■■□□□ 1.99
PTBP1-219ENST00000621737 CDCA7Q9BWT1 371 aaPredicted RBP27.47■■□□□ 1.99
PTBP1-219ENST00000621737 PEAK1Q9H792 1746 aa27.47■■□□□ 1.99
PTBP1-219ENST00000621737 CCDC7Q96M83 1385 aa27.47■■□□□ 1.99
PTBP1-219ENST00000621737 OVOS2A0A0G2JMS6 1433 aa27.45■■□□□ 1.98
PTBP1-219ENST00000621737 TRIM37O94972 964 aa27.45■■□□□ 1.98
PTBP1-219ENST00000621737 C11orf95C9JLR9 678 aaPredicted RBP27.44■■□□□ 1.98
PTBP1-219ENST00000621737 DDB1Q16531 1140 aa27.44■■□□□ 1.98
PTBP1-219ENST00000621737 KIF20BQ96Q89 1820 aa27.43■■□□□ 1.98
PTBP1-219ENST00000621737 EN1Q05925 392 aaPredicted RBP27.42■■□□□ 1.98
PTBP1-219ENST00000621737 FAM208AQ9UK61 1670 aaKnown RBP27.4■■□□□ 1.98
PTBP1-219ENST00000621737 ANKRD24Q8TF21 1146 aa27.4■■□□□ 1.98
PTBP1-219ENST00000621737 FYB1O15117 783 aa27.39■■□□□ 1.98
PTBP1-219ENST00000621737 IP6K1Q92551 441 aa27.39■■□□□ 1.98
PTBP1-219ENST00000621737 PARD3Q8TEW0 1356 aa27.38■■□□□ 1.97
PTBP1-219ENST00000621737 EIF4G2P78344 907 aaKnown RBP eCLIP27.38■■□□□ 1.97
PTBP1-219ENST00000621737 NLRP2Q9NX02 1062 aa27.38■■□□□ 1.97
PTBP1-219ENST00000621737 MAP3K19Q56UN5 1328 aa27.38■■□□□ 1.97
PTBP1-219ENST00000621737 APBA3O96018 575 aa27.37■■□□□ 1.97
PTBP1-219ENST00000621737 TNS2Q63HR2 1409 aa27.37■■□□□ 1.97
PTBP1-219ENST00000621737 SRCAPQ6ZRS2 3230 aa27.37■■□□□ 1.97
PTBP1-219ENST00000621737 SBF2Q86WG5 1849 aa27.37■■□□□ 1.97
PTBP1-219ENST00000621737 GGNBP2Q9H3C7 697 aa27.36■■□□□ 1.97
PTBP1-219ENST00000621737 BCL9O00512 1426 aa27.35■■□□□ 1.97
PTBP1-219ENST00000621737 NSD3Q9BZ95 1437 aa27.35■■□□□ 1.97
PTBP1-219ENST00000621737 CAMKK2Q96RR4 588 aa27.35■■□□□ 1.97
PTBP1-219ENST00000621737 RREB1Q92766 1687 aa27.35■■□□□ 1.97
PTBP1-219ENST00000621737 RTL1A6NKG5 1358 aa27.35■■□□□ 1.97
PTBP1-219ENST00000621737 EZH2Q15910 746 aaKnown RBP27.34■■□□□ 1.97
PTBP1-219ENST00000621737 HSPA5P11021 654 aaKnown RBP27.33■■□□□ 1.97
PTBP1-219ENST00000621737 MARCH10Q8NA82 808 aaPredicted RBP27.33■■□□□ 1.97
PTBP1-219ENST00000621737 CARD14Q9BXL6 1004 aa27.33■■□□□ 1.97
PTBP1-219ENST00000621737 EXOC5O00471 708 aa27.32■■□□□ 1.96
PTBP1-219ENST00000621737 HOXC9P31274 260 aa27.32■■□□□ 1.96
PTBP1-219ENST00000621737 AMPHP49418 695 aa27.32■■□□□ 1.96
PTBP1-219ENST00000621737 RGPD3A6NKT7 1758 aaPredicted RBP27.31■■□□□ 1.96
PTBP1-219ENST00000621737 RGPD4Q7Z3J3 1758 aa27.31■■□□□ 1.96
PTBP1-219ENST00000621737 FBLN1P23142 703 aa27.31■■□□□ 1.96
PTBP1-219ENST00000621737 IL2RBP14784 551 aa27.3■■□□□ 1.96
PTBP1-219ENST00000621737 NUP188Q5SRE5 1749 aa27.29■■□□□ 1.96
PTBP1-219ENST00000621737 RRS1Q15050 365 aaKnown RBP27.28■■□□□ 1.96
PTBP1-219ENST00000621737 LTV1Q96GA3 475 aaPredicted RBP27.28■■□□□ 1.96
PTBP1-219ENST00000621737 POLR3GLQ9BT43 218 aa27.26■■□□□ 1.95
PTBP1-219ENST00000621737 BCL11BQ9C0K0 894 aaPredicted RBP27.26■■□□□ 1.95
PTBP1-219ENST00000621737 PSDA5PKW4 1024 aaPredicted RBP27.25■■□□□ 1.95
PTBP1-219ENST00000621737 KIF24Q5T7B8 1368 aa27.24■■□□□ 1.95
PTBP1-219ENST00000621737 CGNL1Q0VF96 1302 aa27.24■■□□□ 1.95
PTBP1-219ENST00000621737 RGPD2P0DJD1 1756 aa27.24■■□□□ 1.95
PTBP1-219ENST00000621737 NHSQ6T4R5 1651 aa27.23■■□□□ 1.95
PTBP1-219ENST00000621737 SMG6Q86US8 1419 aaKnown RBP27.23■■□□□ 1.95
PTBP1-219ENST00000621737 LRP5O75197 1615 aa27.23■■□□□ 1.95
PTBP1-219ENST00000621737 FLT4P35916 1363 aa27.22■■□□□ 1.95
PTBP1-219ENST00000621737 ANKRD26Q9UPS8 1709 aa27.21■■□□□ 1.95
PTBP1-219ENST00000621737 INSRP06213 1382 aa27.21■■□□□ 1.95
PTBP1-219ENST00000621737 PLSCR1O15162 318 aa27.2■■□□□ 1.94
PTBP1-219ENST00000621737 R3HDM1Q15032 1099 aaKnown RBP27.2■■□□□ 1.94
PTBP1-219ENST00000621737 PTF1AQ7RTS3 328 aa27.2■■□□□ 1.94
PTBP1-219ENST00000621737 MEGF6O75095 1541 aa27.16■■□□□ 1.94
PTBP1-219ENST00000621737 HSP90AB2PQ58FF8 381 aa27.15■■□□□ 1.94
PTBP1-219ENST00000621737 NBPF14Q5TI25 921 aa27.15■■□□□ 1.94
PTBP1-219ENST00000621737 SHANK3Q9BYB0 1731 aa27.14■■□□□ 1.94
PTBP1-219ENST00000621737 NBPF6Q5VWK0 638 aa27.14■■□□□ 1.94
PTBP1-219ENST00000621737 NBPF4Q96M43 638 aa27.14■■□□□ 1.94
PTBP1-219ENST00000621737 EMILIN1Q9Y6C2 1016 aa27.14■■□□□ 1.94
PTBP1-219ENST00000621737 PANK3Q9H999 370 aa27.12■■□□□ 1.93
PTBP1-219ENST00000621737 MAP2P11137 1827 aaKnown RBP27.11■■□□□ 1.93
PTBP1-219ENST00000621737 KCNQ2O43526 872 aa27.11■■□□□ 1.93
PTBP1-219ENST00000621737 ACSBG1Q96GR2 724 aa27.11■■□□□ 1.93
PTBP1-219ENST00000621737 DDX54Q8TDD1 881 aaKnown RBP27.1■■□□□ 1.93
PTBP1-219ENST00000621737 BTAF1O14981 1849 aa27.1■■□□□ 1.93
PTBP1-219ENST00000621737 NSD2O96028 1365 aa27.09■■□□□ 1.93
PTBP1-219ENST00000621737 USHBP1Q8N6Y0 703 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms