RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 USP19O94966 1318 aa21.01■□□□□ 0.95
CBWD3-216ENST00000621396 AXIN2Q9Y2T1 843 aa21■□□□□ 0.95
CBWD3-216ENST00000621396 NFAT5O94916 1531 aa21■□□□□ 0.95
CBWD3-216ENST00000621396 ARHGEF25Q86VW2 580 aa21■□□□□ 0.95
CBWD3-216ENST00000621396 MED1Q15648 1581 aaPredicted RBP21■□□□□ 0.95
CBWD3-216ENST00000621396 ALS2Q96Q42 1657 aa21■□□□□ 0.95
CBWD3-216ENST00000621396 SPINK5Q9NQ38 1064 aaPredicted RBP20.99■□□□□ 0.95
CBWD3-216ENST00000621396 GTF3C3Q9Y5Q9 886 aa20.99■□□□□ 0.95
CBWD3-216ENST00000621396 FCHSD2O94868 740 aa20.99■□□□□ 0.95
CBWD3-216ENST00000621396 CHRNA2Q15822 529 aa20.99■□□□□ 0.95
CBWD3-216ENST00000621396 USHBP1Q8N6Y0 703 aa20.99■□□□□ 0.95
CBWD3-216ENST00000621396 EYA1Q99502 592 aa20.99■□□□□ 0.95
CBWD3-216ENST00000621396 MAPK8IP3Q9UPT6 1336 aa20.99■□□□□ 0.95
CBWD3-216ENST00000621396 IP6K1Q92551 441 aa20.97■□□□□ 0.95
CBWD3-216ENST00000621396 LRRC59Q96AG4 307 aaKnown RBP20.97■□□□□ 0.95
CBWD3-216ENST00000621396 USP54Q70EL1 1684 aa20.97■□□□□ 0.95
CBWD3-216ENST00000621396 LTN1O94822 1766 aa20.96■□□□□ 0.95
CBWD3-216ENST00000621396 WWC1Q8IX03 1113 aa20.96■□□□□ 0.95
CBWD3-216ENST00000621396 TMPOP42166 694 aaKnown RBP20.96■□□□□ 0.95
CBWD3-216ENST00000621396 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
CBWD3-216ENST00000621396 ZNF521Q96K83 1311 aa20.96■□□□□ 0.95
CBWD3-216ENST00000621396 ROBO1Q9Y6N7 1651 aa20.95■□□□□ 0.94
CBWD3-216ENST00000621396 SLIT3O75094 1523 aa20.95■□□□□ 0.94
CBWD3-216ENST00000621396 UBAP1LF5GYI3 381 aa20.94■□□□□ 0.94
CBWD3-216ENST00000621396 HAP1P54257 671 aaPredicted RBP20.94■□□□□ 0.94
CBWD3-216ENST00000621396 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
CBWD3-216ENST00000621396 RIPK4P57078 832 aa20.94■□□□□ 0.94
CBWD3-216ENST00000621396 ARHGEF10O15013 1369 aa20.93■□□□□ 0.94
CBWD3-216ENST00000621396 GOLGA2Q08379 1002 aa20.93■□□□□ 0.94
CBWD3-216ENST00000621396 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
CBWD3-216ENST00000621396 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
CBWD3-216ENST00000621396 TOM1O60784 492 aa20.92■□□□□ 0.94
CBWD3-216ENST00000621396 KIAA0232Q92628 1395 aa20.92■□□□□ 0.94
CBWD3-216ENST00000621396 TRIM35Q9UPQ4 493 aa20.91■□□□□ 0.94
CBWD3-216ENST00000621396 NEFMP07197 916 aa20.9■□□□□ 0.94
CBWD3-216ENST00000621396 ANKRD24Q8TF21 1146 aa20.9■□□□□ 0.94
CBWD3-216ENST00000621396 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
CBWD3-216ENST00000621396 IGSF1Q8N6C5 1336 aa20.9■□□□□ 0.94
CBWD3-216ENST00000621396 PNNQ9H307 717 aaKnown RBP20.89■□□□□ 0.94
CBWD3-216ENST00000621396 KIF24Q5T7B8 1368 aa20.89■□□□□ 0.93
CBWD3-216ENST00000621396 FAM83GA6ND36 823 aa20.89■□□□□ 0.93
CBWD3-216ENST00000621396 NHSL1Q5SYE7 1610 aa20.89■□□□□ 0.93
CBWD3-216ENST00000621396 RTL1A6NKG5 1358 aa20.89■□□□□ 0.93
CBWD3-216ENST00000621396 IRX6P78412 446 aaPredicted RBP20.88■□□□□ 0.93
CBWD3-216ENST00000621396 PDE3BQ13370 1112 aa20.88■□□□□ 0.93
CBWD3-216ENST00000621396 DCTN1Q14203 1278 aa20.87■□□□□ 0.93
CBWD3-216ENST00000621396 DUSP27Q5VZP5 1158 aa20.87■□□□□ 0.93
CBWD3-216ENST00000621396 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
CBWD3-216ENST00000621396 PRDM11Q9NQV5 511 aa20.87■□□□□ 0.93
CBWD3-216ENST00000621396 PHRF1Q9P1Y6 1649 aaKnown RBP20.87■□□□□ 0.93
CBWD3-216ENST00000621396 SLFN5Q08AF3 891 aa20.86■□□□□ 0.93
CBWD3-216ENST00000621396 NFE2L2Q16236 605 aa20.86■□□□□ 0.93
CBWD3-216ENST00000621396 RGPD1P0DJD0 1748 aa20.86■□□□□ 0.93
CBWD3-216ENST00000621396 CERKQ8TCT0 537 aa20.84■□□□□ 0.93
CBWD3-216ENST00000621396 RGPD5Q99666 1765 aa20.84■□□□□ 0.93
CBWD3-216ENST00000621396 ERBB3P21860 1342 aa20.84■□□□□ 0.93
CBWD3-216ENST00000621396 MTHFSDQ2M296 383 aaKnown RBP20.84■□□□□ 0.93
CBWD3-216ENST00000621396 CSB-PGBD3P0DP91 1061 aa20.83■□□□□ 0.93
CBWD3-216ENST00000621396 KDRP35968 1356 aa20.83■□□□□ 0.92
CBWD3-216ENST00000621396 CCDC27Q2M243 656 aa20.83■□□□□ 0.92
CBWD3-216ENST00000621396 TSR2Q969E8 191 aaKnown RBP20.83■□□□□ 0.92
CBWD3-216ENST00000621396 NLRP2Q9NX02 1062 aa20.83■□□□□ 0.92
CBWD3-216ENST00000621396 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
CBWD3-216ENST00000621396 LAS1LQ9Y4W2 734 aaKnown RBP20.82■□□□□ 0.92
CBWD3-216ENST00000621396 CRYBG1Q9Y4K1 1723 aa20.82■□□□□ 0.92
CBWD3-216ENST00000621396 MCM10Q7L590 875 aa20.81■□□□□ 0.92
CBWD3-216ENST00000621396 E9PSI1 815 aa20.8■□□□□ 0.92
CBWD3-216ENST00000621396 NGEFQ8N5V2 710 aa20.8■□□□□ 0.92
CBWD3-216ENST00000621396 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
CBWD3-216ENST00000621396 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
CBWD3-216ENST00000621396 FKBP8Q14318 412 aa20.79■□□□□ 0.92
CBWD3-216ENST00000621396 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
CBWD3-216ENST00000621396 WDR63Q8IWG1 891 aa20.79■□□□□ 0.92
CBWD3-216ENST00000621396 TRMT2AQ8IZ69 625 aaKnown RBP20.79■□□□□ 0.92
CBWD3-216ENST00000621396 STRN4Q9NRL3 753 aa20.79■□□□□ 0.92
CBWD3-216ENST00000621396 ADAMTS2O95450 1211 aa20.78■□□□□ 0.92
CBWD3-216ENST00000621396 CPDO75976 1380 aa20.78■□□□□ 0.92
CBWD3-216ENST00000621396 AHDC1Q5TGY3 1603 aaPredicted RBP20.78■□□□□ 0.92
CBWD3-216ENST00000621396 RCAN3Q9UKA8 241 aa20.78■□□□□ 0.92
CBWD3-216ENST00000621396 PHLPP1O60346 1717 aa20.76■□□□□ 0.91
CBWD3-216ENST00000621396 USP35Q9P2H5 1018 aa20.76■□□□□ 0.91
CBWD3-216ENST00000621396 COL18A1P39060 1754 aa20.76■□□□□ 0.91
CBWD3-216ENST00000621396 CAMTA1Q9Y6Y1 1673 aa20.76■□□□□ 0.91
CBWD3-216ENST00000621396 BTG4Q9NY30 223 aa20.74■□□□□ 0.91
CBWD3-216ENST00000621396 DLG5Q8TDM6 1919 aa20.74■□□□□ 0.91
CBWD3-216ENST00000621396 ABCA3Q99758 1704 aa20.73■□□□□ 0.91
CBWD3-216ENST00000621396 PLIN1O60240 522 aa20.73■□□□□ 0.91
CBWD3-216ENST00000621396 TOM1L2Q6ZVM7 507 aa20.73■□□□□ 0.91
CBWD3-216ENST00000621396 COL16A1Q07092 1604 aaPredicted RBP20.73■□□□□ 0.91
CBWD3-216ENST00000621396 FANCIQ9NVI1 1328 aa20.73■□□□□ 0.91
CBWD3-216ENST00000621396 LARP1Q6PKG0 1096 aaKnown RBP20.73■□□□□ 0.91
CBWD3-216ENST00000621396 EVA1CP58658 441 aa20.72■□□□□ 0.91
CBWD3-216ENST00000621396 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
CBWD3-216ENST00000621396 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
CBWD3-216ENST00000621396 NEFLP07196 543 aa20.7■□□□□ 0.91
CBWD3-216ENST00000621396 GAS2L2Q8NHY3 880 aa20.7■□□□□ 0.91
CBWD3-216ENST00000621396 MYH16Q9H6N6 1097 aa20.7■□□□□ 0.91
CBWD3-216ENST00000621396 RTF1Q92541 710 aaKnown RBP20.7■□□□□ 0.9
CBWD3-216ENST00000621396 EXOSC9Q06265 439 aaKnown RBP20.69■□□□□ 0.9
CBWD3-216ENST00000621396 BCAR3O75815 825 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms